RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 GPTP24298 496 aa13.29□□□□□ -0.28
NCKIPSD-202ENST00000413374 PDE6BP35913 854 aa13.29□□□□□ -0.28
NCKIPSD-202ENST00000413374 ST5P78524 1137 aa13.29□□□□□ -0.28
NCKIPSD-202ENST00000413374 AIMP1Q12904 312 aaKnown RBP13.29□□□□□ -0.28
NCKIPSD-202ENST00000413374 PDIA6Q15084 440 aa13.29□□□□□ -0.28
NCKIPSD-202ENST00000413374 PROSER3Q2NL68 480 aa13.29□□□□□ -0.28
NCKIPSD-202ENST00000413374 KIF6Q6ZMV9 814 aa13.29□□□□□ -0.28
NCKIPSD-202ENST00000413374 TTLL6Q8N841 843 aa13.29□□□□□ -0.28
NCKIPSD-202ENST00000413374 MRS2Q9HD23 443 aa13.29□□□□□ -0.28
NCKIPSD-202ENST00000413374 BABAM1Q9NWV8 329 aa13.29□□□□□ -0.28
NCKIPSD-202ENST00000413374 N4BP2Q86UW6 1770 aaPredicted RBP13.28□□□□□ -0.28
NCKIPSD-202ENST00000413374 GTF2E1P29083 439 aaPredicted RBP13.28□□□□□ -0.28
NCKIPSD-202ENST00000413374 C9orf131Q5VYM1 1079 aa13.28□□□□□ -0.28
NCKIPSD-202ENST00000413374 SALL2Q9Y467 1007 aaPredicted RBP13.28□□□□□ -0.28
NCKIPSD-202ENST00000413374 MAP3K15Q6ZN16 1313 aa13.28□□□□□ -0.28
NCKIPSD-202ENST00000413374 ATP10DQ9P241 1426 aa13.28□□□□□ -0.28
NCKIPSD-202ENST00000413374 ELL2O00472 640 aaPredicted RBP13.27□□□□□ -0.29
NCKIPSD-202ENST00000413374 RASSF7Q02833 373 aa13.27□□□□□ -0.29
NCKIPSD-202ENST00000413374 TPTE2Q6XPS3 522 aa13.27□□□□□ -0.29
NCKIPSD-202ENST00000413374 CFAP44Q96MT7 982 aa13.27□□□□□ -0.29
NCKIPSD-202ENST00000413374 GPBP1L1Q9HC44 474 aaPredicted RBP13.27□□□□□ -0.29
NCKIPSD-202ENST00000413374 MBIPQ9NS73 344 aa13.27□□□□□ -0.29
NCKIPSD-202ENST00000413374 ERVV-1B6SEH8 477 aa13.26□□□□□ -0.29
NCKIPSD-202ENST00000413374 C21orf2O43822 256 aa13.26□□□□□ -0.29
NCKIPSD-202ENST00000413374 COPS6Q7L5N1 327 aa13.26□□□□□ -0.29
NCKIPSD-202ENST00000413374 NUTM1Q86Y26 1132 aa13.26□□□□□ -0.29
NCKIPSD-202ENST00000413374 XAGE3Q8WTP9 111 aa13.26□□□□□ -0.29
NCKIPSD-202ENST00000413374 ZNF428Q96B54 188 aa13.26□□□□□ -0.29
NCKIPSD-202ENST00000413374 DLG5Q8TDM6 1919 aa13.25□□□□□ -0.29
NCKIPSD-202ENST00000413374 SUSD4Q5VX71 490 aa13.25□□□□□ -0.29
NCKIPSD-202ENST00000413374 DUSP27Q5VZP5 1158 aa13.25□□□□□ -0.29
NCKIPSD-202ENST00000413374 LRP10Q7Z4F1 713 aa13.25□□□□□ -0.29
NCKIPSD-202ENST00000413374 RNF181Q9P0P0 153 aa13.25□□□□□ -0.29
NCKIPSD-202ENST00000413374 SRGNP10124 158 aa13.24□□□□□ -0.29
NCKIPSD-202ENST00000413374 ERFEQ4G0M1 354 aa13.24□□□□□ -0.29
NCKIPSD-202ENST00000413374 HDGFL1Q5TGJ6 251 aa13.24□□□□□ -0.29
NCKIPSD-202ENST00000413374 FAM9BQ8IZU0 186 aa13.24□□□□□ -0.29
NCKIPSD-202ENST00000413374 CHPF2Q9P2E5 772 aa13.24□□□□□ -0.29
NCKIPSD-202ENST00000413374 KIAA1551Q9HCM1 1747 aa13.24□□□□□ -0.29
NCKIPSD-202ENST00000413374 KIF13BQ9NQT8 1826 aa13.23□□□□□ -0.29
NCKIPSD-202ENST00000413374 ERBB4Q15303 1308 aa13.23□□□□□ -0.29
NCKIPSD-202ENST00000413374 ZNF853P0CG23 659 aa13.23□□□□□ -0.29
NCKIPSD-202ENST00000413374 C1QTNF8P60827 252 aa13.23□□□□□ -0.29
NCKIPSD-202ENST00000413374 GNAI1P63096 354 aa13.23□□□□□ -0.29
NCKIPSD-202ENST00000413374 GIGYF2Q6Y7W6 1299 aaKnown RBP13.23□□□□□ -0.29
NCKIPSD-202ENST00000413374 MASTLQ96GX5 879 aa13.23□□□□□ -0.29
NCKIPSD-202ENST00000413374 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
NCKIPSD-202ENST00000413374 IFT57Q9NWB7 429 aa13.23□□□□□ -0.29
NCKIPSD-202ENST00000413374 UBN2Q6ZU65 1347 aa13.22□□□□□ -0.29
NCKIPSD-202ENST00000413374 PRELPP51888 382 aa13.22□□□□□ -0.29
NCKIPSD-202ENST00000413374 CALD1Q05682 793 aaKnown RBP13.22□□□□□ -0.29
NCKIPSD-202ENST00000413374 STYK1Q6J9G0 422 aa13.22□□□□□ -0.29
NCKIPSD-202ENST00000413374 ZNF34Q8IZ26 560 aa13.22□□□□□ -0.29
NCKIPSD-202ENST00000413374 CNKSR1Q969H4 720 aa13.22□□□□□ -0.29
NCKIPSD-202ENST00000413374 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
NCKIPSD-202ENST00000413374 PDZRN3Q9UPQ7 1066 aa13.22□□□□□ -0.29
NCKIPSD-202ENST00000413374 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
NCKIPSD-202ENST00000413374 ADCY9O60503 1353 aa13.21□□□□□ -0.29
NCKIPSD-202ENST00000413374 RGL2O15211 777 aa13.21□□□□□ -0.29
NCKIPSD-202ENST00000413374 NPR1P16066 1061 aa13.21□□□□□ -0.29
NCKIPSD-202ENST00000413374 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
NCKIPSD-202ENST00000413374 C8orf58Q8NAV2 365 aa13.21□□□□□ -0.29
NCKIPSD-202ENST00000413374 TSR2Q969E8 191 aaKnown RBP13.21□□□□□ -0.29
NCKIPSD-202ENST00000413374 CHD4Q14839 1912 aa13.21□□□□□ -0.3
NCKIPSD-202ENST00000413374 AFDNP55196 1824 aaKnown RBP13.2□□□□□ -0.3
NCKIPSD-202ENST00000413374 NFKBIEO00221 500 aa13.2□□□□□ -0.3
NCKIPSD-202ENST00000413374 TCERG1O14776 1098 aaKnown RBP13.2□□□□□ -0.3
NCKIPSD-202ENST00000413374 OLFM4Q6UX06 510 aa13.2□□□□□ -0.3
NCKIPSD-202ENST00000413374 WWC1Q8IX03 1113 aa13.2□□□□□ -0.3
NCKIPSD-202ENST00000413374 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 KLRG2A4D1S0 409 aaPredicted RBP13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 LMNB1P20700 586 aa13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 PPP1R42Q7Z4L9 355 aa13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 SYNE4Q8N205 404 aa13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 UTP14AQ9BVJ6 771 aaKnown RBP13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 PHAXQ9H814 394 aaKnown RBP13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 NMRK2Q9NPI5 230 aa13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 ABCC12Q96J65 1359 aa13.19□□□□□ -0.3
NCKIPSD-202ENST00000413374 ATP5J2-PTCD1G3V325 749 aa13.18□□□□□ -0.3
NCKIPSD-202ENST00000413374 NTSR2O95665 410 aa13.18□□□□□ -0.3
NCKIPSD-202ENST00000413374 HOXB7P09629 217 aa13.18□□□□□ -0.3
NCKIPSD-202ENST00000413374 TCIRG1Q13488 830 aa13.18□□□□□ -0.3
NCKIPSD-202ENST00000413374 PARP10Q53GL7 1025 aa13.18□□□□□ -0.3
NCKIPSD-202ENST00000413374 ANKRD13DQ6ZTN6 518 aa13.18□□□□□ -0.3
NCKIPSD-202ENST00000413374 RRAGCQ9HB90 399 aa13.18□□□□□ -0.3
NCKIPSD-202ENST00000413374 KIF3CO14782 793 aa13.17□□□□□ -0.3
NCKIPSD-202ENST00000413374 HCLS1P14317 486 aaPredicted RBP13.17□□□□□ -0.3
NCKIPSD-202ENST00000413374 HSP90AB3PQ58FF7 597 aa13.17□□□□□ -0.3
NCKIPSD-202ENST00000413374 RTL5Q5HYW3 569 aaPredicted RBP13.17□□□□□ -0.3
NCKIPSD-202ENST00000413374 NLRP10Q86W26 655 aa13.17□□□□□ -0.3
NCKIPSD-202ENST00000413374 C7orf43Q8WVR3 580 aa13.17□□□□□ -0.3
NCKIPSD-202ENST00000413374 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
NCKIPSD-202ENST00000413374 HYPKQ9NX55 129 aa13.17□□□□□ -0.3
NCKIPSD-202ENST00000413374 TRMT112Q9UI30 125 aaKnown RBP13.17□□□□□ -0.3
NCKIPSD-202ENST00000413374 ALDH1B1P30837 517 aa13.16□□□□□ -0.3
NCKIPSD-202ENST00000413374 CCDC27Q2M243 656 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms