RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 C21orf2O43822 256 aa25.51■■□□□ 1.67
CPSF7-204ENST00000413232 CLEC4GQ6UXB4 293 aa25.5■■□□□ 1.67
CPSF7-204ENST00000413232 RBM46Q8TBY0 533 aaKnown RBP25.5■■□□□ 1.67
CPSF7-204ENST00000413232 ARFGEF2Q9Y6D5 1785 aa25.5■■□□□ 1.67
CPSF7-204ENST00000413232 SRGNP10124 158 aa25.49■■□□□ 1.67
CPSF7-204ENST00000413232 NFE2L2Q16236 605 aa25.49■■□□□ 1.67
CPSF7-204ENST00000413232 HLFQ16534 295 aa25.49■■□□□ 1.67
CPSF7-204ENST00000413232 PDZRN3Q9UPQ7 1066 aa25.49■■□□□ 1.67
CPSF7-204ENST00000413232 NUP98P52948 1817 aa25.49■■□□□ 1.67
CPSF7-204ENST00000413232 ZC3H4Q9UPT8 1303 aaKnown RBP25.47■■□□□ 1.67
CPSF7-204ENST00000413232 NPHP1O15259 732 aa25.47■■□□□ 1.67
CPSF7-204ENST00000413232 APLP1P51693 650 aa25.47■■□□□ 1.67
CPSF7-204ENST00000413232 ST5P78524 1137 aa25.47■■□□□ 1.67
CPSF7-204ENST00000413232 DNAJC5GQ8N7S2 189 aa25.47■■□□□ 1.67
CPSF7-204ENST00000413232 WDR90Q96KV7 1748 aa25.46■■□□□ 1.67
CPSF7-204ENST00000413232 GLTPD2A6NH11 291 aa25.46■■□□□ 1.67
CPSF7-204ENST00000413232 NEFMP07197 916 aa25.46■■□□□ 1.67
CPSF7-204ENST00000413232 EIF4A1P60842 406 aaKnown RBP25.46■■□□□ 1.67
CPSF7-204ENST00000413232 NBPF5PQ86XG9 351 aaPredicted RBP25.46■■□□□ 1.67
CPSF7-204ENST00000413232 C16orf71Q8IYS4 520 aaPredicted RBP25.46■■□□□ 1.67
CPSF7-204ENST00000413232 STYK1Q6J9G0 422 aa25.45■■□□□ 1.66
CPSF7-204ENST00000413232 NIP7Q9Y221 180 aaKnown RBP eCLIP25.45■■□□□ 1.66
CPSF7-204ENST00000413232 ZNF652Q9Y2D9 606 aa25.45■■□□□ 1.66
CPSF7-204ENST00000413232 HTRA3P83110 453 aa25.44■■□□□ 1.66
CPSF7-204ENST00000413232 PRPF40BQ6NWY9 871 aaKnown RBP25.44■■□□□ 1.66
CPSF7-204ENST00000413232 NGEFQ8N5V2 710 aa25.44■■□□□ 1.66
CPSF7-204ENST00000413232 MASTLQ96GX5 879 aa25.44■■□□□ 1.66
CPSF7-204ENST00000413232 FAM177BA6PVY3 158 aa25.43■■□□□ 1.66
CPSF7-204ENST00000413232 PNISRQ8TF01 805 aaKnown RBP25.43■■□□□ 1.66
CPSF7-204ENST00000413232 CNKSR1Q969H4 720 aa25.43■■□□□ 1.66
CPSF7-204ENST00000413232 POTECB2RU33 542 aa25.42■■□□□ 1.66
CPSF7-204ENST00000413232 KLRG2A4D1S0 409 aaPredicted RBP25.41■■□□□ 1.66
CPSF7-204ENST00000413232 RGL2O15211 777 aa25.41■■□□□ 1.66
CPSF7-204ENST00000413232 FSTL1Q12841 308 aa25.41■■□□□ 1.66
CPSF7-204ENST00000413232 TTLL7Q6ZT98 887 aa25.41■■□□□ 1.66
CPSF7-204ENST00000413232 C7orf43Q8WVR3 580 aa25.41■■□□□ 1.66
CPSF7-204ENST00000413232 RRP7AQ9Y3A4 280 aaKnown RBP25.41■■□□□ 1.66
CPSF7-204ENST00000413232 TPTE2Q6XPS3 522 aa25.4■■□□□ 1.66
CPSF7-204ENST00000413232 MAPK8IP3Q9UPT6 1336 aa25.39■■□□□ 1.66
CPSF7-204ENST00000413232 VEGFAP15692 232 aaPredicted RBP25.39■■□□□ 1.66
CPSF7-204ENST00000413232 DDX10Q13206 875 aaKnown RBP25.39■■□□□ 1.66
CPSF7-204ENST00000413232 ERFEQ4G0M1 354 aa25.39■■□□□ 1.66
CPSF7-204ENST00000413232 LTBP3Q9NS15 1303 aa25.38■■□□□ 1.65
CPSF7-204ENST00000413232 RALBP1Q15311 655 aa25.38■■□□□ 1.65
CPSF7-204ENST00000413232 OLFM4Q6UX06 510 aa25.38■■□□□ 1.65
CPSF7-204ENST00000413232 TAOK3Q9H2K8 898 aa25.38■■□□□ 1.65
CPSF7-204ENST00000413232 MYL6BP14649 208 aa25.37■■□□□ 1.65
CPSF7-204ENST00000413232 NPR1P16066 1061 aa25.37■■□□□ 1.65
CPSF7-204ENST00000413232 PNNQ9H307 717 aaKnown RBP25.37■■□□□ 1.65
CPSF7-204ENST00000413232 RIPK4P57078 832 aa25.36■■□□□ 1.65
CPSF7-204ENST00000413232 MAP3K15Q6ZN16 1313 aa25.36■■□□□ 1.65
CPSF7-204ENST00000413232 ABCC12Q96J65 1359 aa25.35■■□□□ 1.65
CPSF7-204ENST00000413232 ERVV-1B6SEH8 477 aa25.35■■□□□ 1.65
CPSF7-204ENST00000413232 NUTM1Q86Y26 1132 aa25.35■■□□□ 1.65
CPSF7-204ENST00000413232 TMPOP42166 694 aaKnown RBP25.34■■□□□ 1.65
CPSF7-204ENST00000413232 SMC1BQ8NDV3 1235 aa25.34■■□□□ 1.65
CPSF7-204ENST00000413232 TSPYL4Q9UJ04 414 aa25.34■■□□□ 1.65
CPSF7-204ENST00000413232 PCNTO95613 3336 aa25.33■■□□□ 1.65
CPSF7-204ENST00000413232 DPY19L2Q6NUT2 758 aa25.33■■□□□ 1.65
CPSF7-204ENST00000413232 LRP10Q7Z4F1 713 aa25.33■■□□□ 1.65
CPSF7-204ENST00000413232 ZBTB3Q9H5J0 574 aa25.33■■□□□ 1.65
CPSF7-204ENST00000413232 UBN2Q6ZU65 1347 aa25.33■■□□□ 1.64
CPSF7-204ENST00000413232 DDNO94850 711 aaPredicted RBP25.32■■□□□ 1.64
CPSF7-204ENST00000413232 GPTP24298 496 aa25.32■■□□□ 1.64
CPSF7-204ENST00000413232 PDIA6Q15084 440 aa25.31■■□□□ 1.64
CPSF7-204ENST00000413232 SOGA3Q5TF21 947 aa25.31■■□□□ 1.64
CPSF7-204ENST00000413232 CCDC146Q8IYE0 955 aa25.31■■□□□ 1.64
CPSF7-204ENST00000413232 GTF2E1P29083 439 aaPredicted RBP25.3■■□□□ 1.64
CPSF7-204ENST00000413232 PROSER3Q2NL68 480 aa25.3■■□□□ 1.64
CPSF7-204ENST00000413232 CCDC93Q567U6 631 aa25.3■■□□□ 1.64
CPSF7-204ENST00000413232 SUSD4Q5VX71 490 aa25.3■■□□□ 1.64
CPSF7-204ENST00000413232 KIF6Q6ZMV9 814 aa25.3■■□□□ 1.64
CPSF7-204ENST00000413232 ANXA1P04083 346 aa25.29■■□□□ 1.64
CPSF7-204ENST00000413232 EIF2S2P20042 333 aaKnown RBP25.29■■□□□ 1.64
CPSF7-204ENST00000413232 CRY2Q49AN0 593 aa25.29■■□□□ 1.64
CPSF7-204ENST00000413232 ZNF34Q8IZ26 560 aa25.29■■□□□ 1.64
CPSF7-204ENST00000413232 MYBBP1AQ9BQG0 1328 aaKnown RBP25.29■■□□□ 1.64
CPSF7-204ENST00000413232 KLRG1Q96E93 195 aa25.28■■□□□ 1.64
CPSF7-204ENST00000413232 ZNF277Q9NRM2 450 aaPredicted RBP25.28■■□□□ 1.64
CPSF7-204ENST00000413232 POTEIP0CG38 1075 aa25.27■■□□□ 1.64
CPSF7-204ENST00000413232 POTEJP0CG39 1038 aa25.27■■□□□ 1.64
CPSF7-204ENST00000413232 FKBP4Q02790 459 aaKnown RBP eCLIP25.27■■□□□ 1.64
CPSF7-204ENST00000413232 NEUROD2Q15784 382 aa25.27■■□□□ 1.64
CPSF7-204ENST00000413232 SLC51AQ86UW1 340 aa25.27■■□□□ 1.64
CPSF7-204ENST00000413232 NYXQ9GZU5 481 aa25.27■■□□□ 1.64
CPSF7-204ENST00000413232 ERBB4Q15303 1308 aa25.27■■□□□ 1.64
CPSF7-204ENST00000413232 SNED1Q8TER0 1413 aa25.27■■□□□ 1.64
CPSF7-204ENST00000413232 KRT24Q2M2I5 525 aa25.26■■□□□ 1.63
CPSF7-204ENST00000413232 IFFO2Q5TF58 517 aa25.26■■□□□ 1.63
CPSF7-204ENST00000413232 GIGYF2Q6Y7W6 1299 aaKnown RBP25.26■■□□□ 1.63
CPSF7-204ENST00000413232 ALDH1B1P30837 517 aa25.25■■□□□ 1.63
CPSF7-204ENST00000413232 C3orf67Q6ZVT6 689 aa25.25■■□□□ 1.63
CPSF7-204ENST00000413232 TRIM35Q9UPQ4 493 aa25.25■■□□□ 1.63
CPSF7-204ENST00000413232 NTSR2O95665 410 aa25.24■■□□□ 1.63
CPSF7-204ENST00000413232 NECTIN2Q92692 538 aa25.24■■□□□ 1.63
CPSF7-204ENST00000413232 BABAM1Q9NWV8 329 aa25.24■■□□□ 1.63
CPSF7-204ENST00000413232 SCN4AP35499 1836 aa25.23■■□□□ 1.63
CPSF7-204ENST00000413232 IBTKQ9P2D0 1353 aaPredicted RBP25.23■■□□□ 1.63
CPSF7-204ENST00000413232 ZNF541Q9H0D2 1346 aa25.23■■□□□ 1.63
CPSF7-204ENST00000413232 JMYQ8N9B5 988 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms