RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 SOGA3Q5TF21 947 aa10.48□□□□□ -0.73
CPSF7-203ENST00000413184 REM2Q8IYK8 340 aaPredicted RBP10.48□□□□□ -0.73
CPSF7-203ENST00000413184 P2RX7Q99572 595 aaKnown RBP10.48□□□□□ -0.73
CPSF7-203ENST00000413184 ARIH1Q9Y4X5 557 aaPredicted RBP10.48□□□□□ -0.73
CPSF7-203ENST00000413184 RC3H1Q5TC82 1133 aaKnown RBP10.47□□□□□ -0.73
CPSF7-203ENST00000413184 CABP1Q9NZU7 370 aa10.47□□□□□ -0.73
CPSF7-203ENST00000413184 HCN4Q9Y3Q4 1203 aa10.47□□□□□ -0.73
CPSF7-203ENST00000413184 TTC21BQ7Z4L5 1316 aa10.47□□□□□ -0.73
CPSF7-203ENST00000413184 PCDH11XQ9BZA7 1347 aa10.47□□□□□ -0.73
CPSF7-203ENST00000413184 PCDH11YQ9BZA8 1340 aa10.47□□□□□ -0.73
CPSF7-203ENST00000413184 FKTNO75072 461 aa10.46□□□□□ -0.73
CPSF7-203ENST00000413184 APLP2Q06481 763 aa10.46□□□□□ -0.73
CPSF7-203ENST00000413184 SLC4A1APQ9BWU0 796 aaKnown RBP10.46□□□□□ -0.73
CPSF7-203ENST00000413184 ZNF277Q9NRM2 450 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-203ENST00000413184 TRIM17Q9Y577 477 aa10.46□□□□□ -0.73
CPSF7-203ENST00000413184 CACNA1SQ13698 1873 aa10.46□□□□□ -0.74
CPSF7-203ENST00000413184 CNTNAP4Q9C0A0 1308 aa10.45□□□□□ -0.74
CPSF7-203ENST00000413184 FZD9O00144 591 aa10.45□□□□□ -0.74
CPSF7-203ENST00000413184 ITGAEP38570 1179 aa10.45□□□□□ -0.74
CPSF7-203ENST00000413184 ASAP1Q9ULH1 1129 aa10.45□□□□□ -0.74
CPSF7-203ENST00000413184 EYSQ5T1H1 3165 aa10.45□□□□□ -0.74
CPSF7-203ENST00000413184 CGNL1Q0VF96 1302 aa10.44□□□□□ -0.74
CPSF7-203ENST00000413184 SERPINB2P05120 415 aa10.44□□□□□ -0.74
CPSF7-203ENST00000413184 SLC10A3P09131 477 aa10.44□□□□□ -0.74
CPSF7-203ENST00000413184 SCNN1DP51172 638 aa10.44□□□□□ -0.74
CPSF7-203ENST00000413184 SLC4A8Q2Y0W8 1093 aa10.44□□□□□ -0.74
CPSF7-203ENST00000413184 NOM1Q5C9Z4 860 aaKnown RBP10.44□□□□□ -0.74
CPSF7-203ENST00000413184 NR2E3Q9Y5X4 410 aa10.44□□□□□ -0.74
CPSF7-203ENST00000413184 NRXN2Q9P2S2 1712 aa10.44□□□□□ -0.74
CPSF7-203ENST00000413184 CARMIL3Q8ND23 1372 aa10.43□□□□□ -0.74
CPSF7-203ENST00000413184 SLX4Q8IY92 1834 aa10.43□□□□□ -0.74
CPSF7-203ENST00000413184 EIF6P56537 245 aaKnown RBP10.43□□□□□ -0.74
CPSF7-203ENST00000413184 C2orf69Q8N8R5 385 aa10.43□□□□□ -0.74
CPSF7-203ENST00000413184 RAPGEF4Q8WZA2 1011 aa10.43□□□□□ -0.74
CPSF7-203ENST00000413184 ARMC5Q96C12 935 aa10.43□□□□□ -0.74
CPSF7-203ENST00000413184 TMOD3Q9NYL9 352 aa10.43□□□□□ -0.74
CPSF7-203ENST00000413184 MON2Q7Z3U7 1717 aa10.43□□□□□ -0.74
CPSF7-203ENST00000413184 CD163L1Q9NR16 1453 aa10.42□□□□□ -0.74
CPSF7-203ENST00000413184 PRUNE2Q8WUY3 3088 aa10.42□□□□□ -0.74
CPSF7-203ENST00000413184 RGPD2P0DJD1 1756 aa10.42□□□□□ -0.74
CPSF7-203ENST00000413184 BCORQ6W2J9 1755 aa10.42□□□□□ -0.74
CPSF7-203ENST00000413184 COL5A3P25940 1745 aaPredicted RBP10.42□□□□□ -0.74
CPSF7-203ENST00000413184 ZPR1O75312 459 aa10.42□□□□□ -0.74
CPSF7-203ENST00000413184 FKBP4Q02790 459 aaKnown RBP eCLIP10.42□□□□□ -0.74
CPSF7-203ENST00000413184 CDC37L1Q7L3B6 337 aa10.42□□□□□ -0.74
CPSF7-203ENST00000413184 COL26A1Q96A83 441 aa10.42□□□□□ -0.74
CPSF7-203ENST00000413184 GBA2Q9HCG7 927 aaPredicted RBP10.42□□□□□ -0.74
CPSF7-203ENST00000413184 PDZRN3Q9UPQ7 1066 aa10.42□□□□□ -0.74
CPSF7-203ENST00000413184 MYH14Q7Z406 1995 aaKnown RBP10.41□□□□□ -0.74
CPSF7-203ENST00000413184 TATP17735 454 aaPredicted RBP10.41□□□□□ -0.74
CPSF7-203ENST00000413184 NFIXQ14938 502 aa10.41□□□□□ -0.74
CPSF7-203ENST00000413184 CCDC93Q567U6 631 aa10.41□□□□□ -0.74
CPSF7-203ENST00000413184 USPL1Q5W0Q7 1092 aa10.41□□□□□ -0.74
CPSF7-203ENST00000413184 PRPF40BQ6NWY9 871 aaKnown RBP10.41□□□□□ -0.74
CPSF7-203ENST00000413184 OTOP1Q7RTM1 612 aa10.41□□□□□ -0.74
CPSF7-203ENST00000413184 JDP2Q8WYK2 163 aa10.41□□□□□ -0.74
CPSF7-203ENST00000413184 CNKSR1Q969H4 720 aa10.41□□□□□ -0.74
CPSF7-203ENST00000413184 RBM42Q9BTD8 480 aaKnown RBP10.41□□□□□ -0.74
CPSF7-203ENST00000413184 ADARB2Q9NS39 739 aaKnown RBP10.41□□□□□ -0.74
CPSF7-203ENST00000413184 WTIPA6NIX2 430 aaPredicted RBP10.4□□□□□ -0.74
CPSF7-203ENST00000413184 PDE6BP35913 854 aa10.4□□□□□ -0.74
CPSF7-203ENST00000413184 STAP2Q9UGK3 403 aa10.4□□□□□ -0.74
CPSF7-203ENST00000413184 COL11A2P13942 1736 aaPredicted RBP10.4□□□□□ -0.74
CPSF7-203ENST00000413184 KDRP35968 1356 aa10.39□□□□□ -0.75
CPSF7-203ENST00000413184 MAP3K19Q56UN5 1328 aa10.39□□□□□ -0.75
CPSF7-203ENST00000413184 ZBTB7BO15156 539 aaPredicted RBP10.39□□□□□ -0.75
CPSF7-203ENST00000413184 CYP27B1O15528 508 aa10.39□□□□□ -0.75
CPSF7-203ENST00000413184 IARSP41252 1262 aaKnown RBP10.39□□□□□ -0.75
CPSF7-203ENST00000413184 IP6K1Q92551 441 aa10.39□□□□□ -0.75
CPSF7-203ENST00000413184 HTATIP2Q9BUP3 242 aa10.39□□□□□ -0.75
CPSF7-203ENST00000413184 ATG3Q9NT62 314 aa10.39□□□□□ -0.75
CPSF7-203ENST00000413184 PTPN22Q9Y2R2 807 aa10.39□□□□□ -0.75
CPSF7-203ENST00000413184 MUC6Q6W4X9 2439 aa10.38□□□□□ -0.75
CPSF7-203ENST00000413184 IRS2Q9Y4H2 1338 aa10.38□□□□□ -0.75
CPSF7-203ENST00000413184 TJAP1Q5JTD0 557 aa10.38□□□□□ -0.75
CPSF7-203ENST00000413184 GUCD1Q96NT3 240 aa10.38□□□□□ -0.75
CPSF7-203ENST00000413184 ZNF692Q9BU19 519 aaPredicted RBP10.38□□□□□ -0.75
CPSF7-203ENST00000413184 ANKRD31Q8N7Z5 1873 aa10.38□□□□□ -0.75
CPSF7-203ENST00000413184 USP48Q86UV5 1035 aa10.37□□□□□ -0.75
CPSF7-203ENST00000413184 MAFAQ8NHW3 353 aaPredicted RBP10.37□□□□□ -0.75
CPSF7-203ENST00000413184 ZNF333Q96JL9 665 aa10.37□□□□□ -0.75
CPSF7-203ENST00000413184 SLC4A9Q96Q91 983 aa10.37□□□□□ -0.75
CPSF7-203ENST00000413184 MYCP01106 439 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-203ENST00000413184 ZEB1P37275 1124 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-203ENST00000413184 MRE11P49959 708 aa10.36□□□□□ -0.75
CPSF7-203ENST00000413184 LRIT3Q3SXY7 679 aa10.36□□□□□ -0.75
CPSF7-203ENST00000413184 USHBP1Q8N6Y0 703 aa10.36□□□□□ -0.75
CPSF7-203ENST00000413184 C1QTNF1Q9BXJ1 281 aa10.36□□□□□ -0.75
CPSF7-203ENST00000413184 PGAP2Q9UHJ9 254 aa10.36□□□□□ -0.75
CPSF7-203ENST00000413184 ARFGEF2Q9Y6D5 1785 aa10.36□□□□□ -0.75
CPSF7-203ENST00000413184 ZNF831Q5JPB2 1677 aa10.35□□□□□ -0.75
CPSF7-203ENST00000413184 CRKLP46109 303 aaKnown RBP10.35□□□□□ -0.75
CPSF7-203ENST00000413184 BCAMP50895 628 aa10.35□□□□□ -0.75
CPSF7-203ENST00000413184 DLK2Q6UY11 383 aa10.35□□□□□ -0.75
CPSF7-203ENST00000413184 NBPF11Q86T75 865 aa10.35□□□□□ -0.75
CPSF7-203ENST00000413184 RASAL3Q86YV0 1011 aa10.35□□□□□ -0.75
CPSF7-203ENST00000413184 ZC3H15Q8WU90 426 aaKnown RBP10.35□□□□□ -0.75
CPSF7-203ENST00000413184 BRIP1Q9BX63 1249 aa10.35□□□□□ -0.75
CPSF7-203ENST00000413184 STYK1Q6J9G0 422 aa10.34□□□□□ -0.75
CPSF7-203ENST00000413184 FAM161BQ96MY7 647 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms