RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 GDF2Q9UK05 429 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-205ENST00000411993 ATAD2Q6PL18 1390 aa9.7□□□□□ -0.86
HDAC9-205ENST00000411993 C2CD2LO14523 706 aa9.69□□□□□ -0.86
HDAC9-205ENST00000411993 LGR5O75473 907 aa9.69□□□□□ -0.86
HDAC9-205ENST00000411993 C1orf53Q5VUE5 145 aa9.69□□□□□ -0.86
HDAC9-205ENST00000411993 GOLGA6L1Q8N7Z2 621 aa9.69□□□□□ -0.86
HDAC9-205ENST00000411993 GAS2L2Q8NHY3 880 aa9.69□□□□□ -0.86
HDAC9-205ENST00000411993 OIP5O43482 229 aa9.68□□□□□ -0.86
HDAC9-205ENST00000411993 C21orf2O43822 256 aa9.68□□□□□ -0.86
HDAC9-205ENST00000411993 SCARF2Q96GP6 870 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-205ENST00000411993 NGLY1Q96IV0 654 aa9.68□□□□□ -0.86
HDAC9-205ENST00000411993 LRRC4BQ9NT99 713 aa9.68□□□□□ -0.86
HDAC9-205ENST00000411993 KCNMA1Q12791 1236 aa9.67□□□□□ -0.86
HDAC9-205ENST00000411993 POTEAQ6S8J7 498 aa9.67□□□□□ -0.86
HDAC9-205ENST00000411993 STAG2Q8N3U4 1231 aa9.67□□□□□ -0.86
HDAC9-205ENST00000411993 FAM200AQ8TCP9 573 aa9.67□□□□□ -0.86
HDAC9-205ENST00000411993 C2orf49Q9BVC5 232 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-205ENST00000411993 ARAFP10398 606 aa9.66□□□□□ -0.86
HDAC9-205ENST00000411993 LAMC2Q13753 1193 aa9.66□□□□□ -0.86
HDAC9-205ENST00000411993 FAM182BQ5T319 152 aa9.66□□□□□ -0.86
HDAC9-205ENST00000411993 PODNQ7Z5L7 613 aa9.66□□□□□ -0.86
HDAC9-205ENST00000411993 ALDH16A1Q8IZ83 802 aa9.66□□□□□ -0.86
HDAC9-205ENST00000411993 GALNT6Q8NCL4 622 aa9.66□□□□□ -0.86
HDAC9-205ENST00000411993 CCDC97Q96F63 343 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-205ENST00000411993 ARXQ96QS3 562 aa9.66□□□□□ -0.86
HDAC9-205ENST00000411993 MARK1Q9P0L2 795 aa9.66□□□□□ -0.86
HDAC9-205ENST00000411993 ANKIB1Q9P2G1 1089 aa9.66□□□□□ -0.86
HDAC9-205ENST00000411993 GGA1Q9UJY5 639 aa9.66□□□□□ -0.86
HDAC9-205ENST00000411993 IGFBP4P22692 258 aa9.65□□□□□ -0.86
HDAC9-205ENST00000411993 IRS1P35568 1242 aa9.65□□□□□ -0.86
HDAC9-205ENST00000411993 SLCO4C1Q6ZQN7 724 aa9.65□□□□□ -0.86
HDAC9-205ENST00000411993 HSH2DQ96JZ2 352 aa9.65□□□□□ -0.86
HDAC9-205ENST00000411993 PRR12Q9ULL5 1215 aa9.65□□□□□ -0.86
HDAC9-205ENST00000411993 NOVA2Q9UNW9 492 aaKnown RBP9.65□□□□□ -0.86
HDAC9-205ENST00000411993 DNMT3AQ9Y6K1 912 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-205ENST00000411993 EFSO43281 561 aa9.64□□□□□ -0.87
HDAC9-205ENST00000411993 C7orf43Q8WVR3 580 aa9.64□□□□□ -0.87
HDAC9-205ENST00000411993 EDARADDQ8WWZ3 215 aa9.64□□□□□ -0.87
HDAC9-205ENST00000411993 NEURL1BA8MQ27 555 aa9.63□□□□□ -0.87
HDAC9-205ENST00000411993 AMPD1P23109 780 aa9.63□□□□□ -0.87
HDAC9-205ENST00000411993 HIF1AQ16665 826 aa9.63□□□□□ -0.87
HDAC9-205ENST00000411993 SUSD3Q96L08 255 aa9.63□□□□□ -0.87
HDAC9-205ENST00000411993 CEP63Q96MT8 703 aa9.63□□□□□ -0.87
HDAC9-205ENST00000411993 STRN4Q9NRL3 753 aa9.63□□□□□ -0.87
HDAC9-205ENST00000411993 HCN2Q9UL51 889 aa9.63□□□□□ -0.87
HDAC9-205ENST00000411993 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.62□□□□□ -0.87
HDAC9-205ENST00000411993 PHF20L1A8MW92 1017 aa9.62□□□□□ -0.87
HDAC9-205ENST00000411993 SHISA8B8ZZ34 492 aa9.62□□□□□ -0.87
HDAC9-205ENST00000411993 ADH6P28332 368 aa9.62□□□□□ -0.87
HDAC9-205ENST00000411993 RASSF7Q02833 373 aa9.62□□□□□ -0.87
HDAC9-205ENST00000411993 C1orf229Q6ZS94 237 aaPredicted RBP9.62□□□□□ -0.87
HDAC9-205ENST00000411993 VTI1AQ96AJ9 217 aa9.62□□□□□ -0.87
HDAC9-205ENST00000411993 RRAGCQ9HB90 399 aa9.62□□□□□ -0.87
HDAC9-205ENST00000411993 ARID3CA6NKF2 412 aa9.61□□□□□ -0.87
HDAC9-205ENST00000411993 KANK3Q6NY19 840 aa9.61□□□□□ -0.87
HDAC9-205ENST00000411993 TMEM151AQ8N4L1 468 aa9.61□□□□□ -0.87
HDAC9-205ENST00000411993 BEND7Q8N7W2 519 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-205ENST00000411993 AVENQ9NQS1 362 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-205ENST00000411993 SERPINA10Q9UK55 444 aa9.61□□□□□ -0.87
HDAC9-205ENST00000411993 CNTNAP5Q8WYK1 1306 aa9.6□□□□□ -0.87
HDAC9-205ENST00000411993 GDF11O95390 407 aa9.6□□□□□ -0.87
HDAC9-205ENST00000411993 EPXP11678 715 aa9.6□□□□□ -0.87
HDAC9-205ENST00000411993 PCBP4P57723 403 aaKnown RBP9.6□□□□□ -0.87
HDAC9-205ENST00000411993 RTN1Q16799 776 aa9.6□□□□□ -0.87
HDAC9-205ENST00000411993 ZNF468Q5VIY5 522 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-205ENST00000411993 ZNF280CQ8ND82 737 aa9.6□□□□□ -0.87
HDAC9-205ENST00000411993 BRD7Q9NPI1 651 aa9.6□□□□□ -0.87
HDAC9-205ENST00000411993 FOXO3O43524 673 aa9.59□□□□□ -0.87
HDAC9-205ENST00000411993 WEE1P30291 646 aa9.59□□□□□ -0.87
HDAC9-205ENST00000411993 GSK3AP49840 483 aa9.59□□□□□ -0.87
HDAC9-205ENST00000411993 TYRO3Q06418 890 aa9.59□□□□□ -0.87
HDAC9-205ENST00000411993 SFSWAPQ12872 951 aaKnown RBP9.59□□□□□ -0.87
HDAC9-205ENST00000411993 ELOAQ14241 798 aaKnown RBP9.58□□□□□ -0.88
HDAC9-205ENST00000411993 C14orf37Q86TY3 774 aa9.58□□□□□ -0.88
HDAC9-205ENST00000411993 ACIN1Q9UKV3 1341 aaKnown RBP9.57□□□□□ -0.88
HDAC9-205ENST00000411993 NEUROD1Q13562 356 aa9.57□□□□□ -0.88
HDAC9-205ENST00000411993 SWI5Q1ZZU3 235 aa9.57□□□□□ -0.88
HDAC9-205ENST00000411993 KLF15Q9UIH9 416 aa9.57□□□□□ -0.88
HDAC9-205ENST00000411993 MKL2Q9ULH7 1088 aa9.57□□□□□ -0.88
HDAC9-205ENST00000411993 ZMIZ1Q9ULJ6 1067 aa9.57□□□□□ -0.88
HDAC9-205ENST00000411993 SNRPNP63162 240 aaKnown RBP9.56□□□□□ -0.88
HDAC9-205ENST00000411993 SPEM2Q0P670 501 aa9.56□□□□□ -0.88
HDAC9-205ENST00000411993 GRIN2CQ14957 1233 aa9.56□□□□□ -0.88
HDAC9-205ENST00000411993 BTLAQ7Z6A9 289 aa9.56□□□□□ -0.88
HDAC9-205ENST00000411993 SYT9Q86SS6 491 aa9.56□□□□□ -0.88
HDAC9-205ENST00000411993 FCHSD1Q86WN1 690 aa9.56□□□□□ -0.88
HDAC9-205ENST00000411993 STK32AQ8WU08 396 aa9.56□□□□□ -0.88
HDAC9-205ENST00000411993 PBXIP1Q96AQ6 731 aa9.56□□□□□ -0.88
HDAC9-205ENST00000411993 KCNH4Q9UQ05 1017 aa9.56□□□□□ -0.88
HDAC9-205ENST00000411993 PRMT3O60678 531 aa9.55□□□□□ -0.88
HDAC9-205ENST00000411993 ATG7O95352 703 aa9.55□□□□□ -0.88
HDAC9-205ENST00000411993 BTBD6Q96KE9 485 aa9.55□□□□□ -0.88
HDAC9-205ENST00000411993 PRIMPOLQ96LW4 560 aa9.55□□□□□ -0.88
HDAC9-205ENST00000411993 SLC30A3Q99726 388 aa9.55□□□□□ -0.88
HDAC9-205ENST00000411993 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.55□□□□□ -0.88
HDAC9-205ENST00000411993 TGFBR3LH3BV60 316 aa9.54□□□□□ -0.88
HDAC9-205ENST00000411993 KCTD17Q8N5Z5 321 aa9.54□□□□□ -0.88
HDAC9-205ENST00000411993 KLK14Q9P0G3 267 aa9.54□□□□□ -0.88
HDAC9-205ENST00000411993 KCNQ4P56696 695 aa9.53□□□□□ -0.88
HDAC9-205ENST00000411993 SRPK2P78362 688 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms