RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
AP001056.1-201ENST00000411956 USP42Q9H9J4 1324 aaKnown RBP20.1■□□□□ 0.81
AP001056.1-201ENST00000411956 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
AP001056.1-201ENST00000411956 DDX58O95786 925 aaKnown RBP20.1■□□□□ 0.81
AP001056.1-201ENST00000411956 ZKSCAN2Q63HK3 967 aa20.1■□□□□ 0.81
AP001056.1-201ENST00000411956 PLBD2Q8NHP8 589 aa20.1■□□□□ 0.81
AP001056.1-201ENST00000411956 ARHGAP45Q92619 1136 aa20.1■□□□□ 0.81
AP001056.1-201ENST00000411956 ZBTB3Q9H5J0 574 aa20.1■□□□□ 0.81
AP001056.1-201ENST00000411956 N4BP2Q86UW6 1770 aaPredicted RBP20.1■□□□□ 0.81
AP001056.1-201ENST00000411956 ANKRD36CQ5JPF3 1778 aa20.09■□□□□ 0.81
AP001056.1-201ENST00000411956 RRP1P56182 461 aaKnown RBP20.09■□□□□ 0.81
AP001056.1-201ENST00000411956 COL23A1Q86Y22 540 aaPredicted RBP20.09■□□□□ 0.81
AP001056.1-201ENST00000411956 FLAD1Q8NFF5 587 aa20.09■□□□□ 0.81
AP001056.1-201ENST00000411956 ARXQ96QS3 562 aa20.09■□□□□ 0.81
AP001056.1-201ENST00000411956 NARFQ9UHQ1 456 aa20.09■□□□□ 0.81
AP001056.1-201ENST00000411956 PI4KAP2A4QPH2 592 aa20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 IPO8O15397 1037 aaKnown RBP20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 TRIM27P14373 513 aa20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 RFC4P35249 363 aa20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 KSR2Q6VAB6 950 aa20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 ATF7IPQ6VMQ6 1270 aa20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 ANKRD13DQ6ZTN6 518 aa20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 RIC3Q7Z5B4 369 aa20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 PI4KAP1Q8N8J0 262 aa20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 API5Q9BZZ5 524 aaKnown RBP20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 SRP68Q9UHB9 627 aaKnown RBP20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 TNNQ9UQP3 1299 aa20.08■□□□□ 0.81
AP001056.1-201ENST00000411956 CASZ1Q86V15 1759 aa20.08■□□□□ 0.8
AP001056.1-201ENST00000411956 RNF123Q5XPI4 1314 aa20.07■□□□□ 0.8
AP001056.1-201ENST00000411956 ERVV-1B6SEH8 477 aa20.07■□□□□ 0.8
AP001056.1-201ENST00000411956 F6X3S4 739 aa20.07■□□□□ 0.8
AP001056.1-201ENST00000411956 PLIN1O60240 522 aa20.07■□□□□ 0.8
AP001056.1-201ENST00000411956 USPL1Q5W0Q7 1092 aa20.07■□□□□ 0.8
AP001056.1-201ENST00000411956 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.07■□□□□ 0.8
AP001056.1-201ENST00000411956 MAP3K2Q9Y2U5 619 aa20.07■□□□□ 0.8
AP001056.1-201ENST00000411956 HLFQ16534 295 aa20.06■□□□□ 0.8
AP001056.1-201ENST00000411956 DNAAF4Q8WXU2 420 aa20.06■□□□□ 0.8
AP001056.1-201ENST00000411956 BCL2L12Q9HB09 334 aa20.06■□□□□ 0.8
AP001056.1-201ENST00000411956 SUPT16HQ9Y5B9 1047 aaKnown RBP20.06■□□□□ 0.8
AP001056.1-201ENST00000411956 NUP98P52948 1817 aa20.06■□□□□ 0.8
AP001056.1-201ENST00000411956 ABCC4O15439 1325 aa20.05■□□□□ 0.8
AP001056.1-201ENST00000411956 ATP10DQ9P241 1426 aa20.05■□□□□ 0.8
AP001056.1-201ENST00000411956 RGL2O15211 777 aa20.05■□□□□ 0.8
AP001056.1-201ENST00000411956 ZPR1O75312 459 aa20.05■□□□□ 0.8
AP001056.1-201ENST00000411956 GIGYF2Q6Y7W6 1299 aaKnown RBP20.05■□□□□ 0.8
AP001056.1-201ENST00000411956 MSH5O43196 834 aa20.04■□□□□ 0.8
AP001056.1-201ENST00000411956 METTL22Q9BUU2 404 aaPredicted RBP20.04■□□□□ 0.8
AP001056.1-201ENST00000411956 COL24A1Q17RW2 1714 aa20.03■□□□□ 0.8
AP001056.1-201ENST00000411956 GYS1P13807 737 aa20.03■□□□□ 0.8
AP001056.1-201ENST00000411956 R3HDM1Q15032 1099 aaKnown RBP20.03■□□□□ 0.8
AP001056.1-201ENST00000411956 CLUAP1Q96AJ1 413 aa20.03■□□□□ 0.8
AP001056.1-201ENST00000411956 MYD88Q99836 296 aa20.03■□□□□ 0.8
AP001056.1-201ENST00000411956 ZNF652Q9Y2D9 606 aa20.03■□□□□ 0.8
AP001056.1-201ENST00000411956 HSP90AB3PQ58FF7 597 aa20.02■□□□□ 0.8
AP001056.1-201ENST00000411956 SLC4A10Q6U841 1118 aa20.02■□□□□ 0.8
AP001056.1-201ENST00000411956 CLEC4GQ6UXB4 293 aa20.02■□□□□ 0.8
AP001056.1-201ENST00000411956 DZIP1LQ8IYY4 767 aaKnown RBP20.02■□□□□ 0.8
AP001056.1-201ENST00000411956 PDGFDQ9GZP0 370 aaPredicted RBP20.02■□□□□ 0.8
AP001056.1-201ENST00000411956 AFDNP55196 1824 aaKnown RBP20.02■□□□□ 0.79
AP001056.1-201ENST00000411956 RLBP1P12271 317 aa20.01■□□□□ 0.79
AP001056.1-201ENST00000411956 TCIRG1Q13488 830 aa20.01■□□□□ 0.79
AP001056.1-201ENST00000411956 FKBP8Q14318 412 aa20.01■□□□□ 0.79
AP001056.1-201ENST00000411956 FTSJ3Q8IY81 847 aaKnown RBP20.01■□□□□ 0.79
AP001056.1-201ENST00000411956 NEXNQ0ZGT2 675 aa20■□□□□ 0.79
AP001056.1-201ENST00000411956 BEND3Q5T5X7 828 aa20■□□□□ 0.79
AP001056.1-201ENST00000411956 C20orf194Q5TEA3 1177 aa20■□□□□ 0.79
AP001056.1-201ENST00000411956 ISCA1Q9BUE6 129 aa20■□□□□ 0.79
AP001056.1-201ENST00000411956 PSDA5PKW4 1024 aaPredicted RBP19.99■□□□□ 0.79
AP001056.1-201ENST00000411956 IGKV5-2P06315 115 aa19.99■□□□□ 0.79
AP001056.1-201ENST00000411956 MS4A1P11836 297 aa19.99■□□□□ 0.79
AP001056.1-201ENST00000411956 TBC1D9BQ66K14 1250 aa19.99■□□□□ 0.79
AP001056.1-201ENST00000411956 ZNF34Q8IZ26 560 aa19.99■□□□□ 0.79
AP001056.1-201ENST00000411956 TMEM57Q8N5G2 664 aa19.99■□□□□ 0.79
AP001056.1-201ENST00000411956 PANK1Q8TE04 598 aa19.99■□□□□ 0.79
AP001056.1-201ENST00000411956 UBN2Q6ZU65 1347 aa19.99■□□□□ 0.79
AP001056.1-201ENST00000411956 ATP5J2-PTCD1G3V325 749 aa19.98■□□□□ 0.79
AP001056.1-201ENST00000411956 GPTP24298 496 aa19.98■□□□□ 0.79
AP001056.1-201ENST00000411956 CCT4P50991 539 aaKnown RBP19.98■□□□□ 0.79
AP001056.1-201ENST00000411956 PDE3AQ14432 1141 aa19.98■□□□□ 0.79
AP001056.1-201ENST00000411956 CWF19L2Q2TBE0 894 aaKnown RBP19.98■□□□□ 0.79
AP001056.1-201ENST00000411956 INTS3Q68E01 1043 aaKnown RBP19.98■□□□□ 0.79
AP001056.1-201ENST00000411956 LINS1Q8NG48 757 aa19.98■□□□□ 0.79
AP001056.1-201ENST00000411956 SRCIN1Q9C0H9 1055 aa19.98■□□□□ 0.79
AP001056.1-201ENST00000411956 NIP7Q9Y221 180 aaKnown RBP eCLIP19.98■□□□□ 0.79
AP001056.1-201ENST00000411956 NEURL1BA8MQ27 555 aa19.97■□□□□ 0.79
AP001056.1-201ENST00000411956 IBTKQ9P2D0 1353 aaPredicted RBP19.96■□□□□ 0.79
AP001056.1-201ENST00000411956 MSL1Q68DK7 614 aa19.96■□□□□ 0.79
AP001056.1-201ENST00000411956 BICDL1Q6ZP65 573 aa19.96■□□□□ 0.79
AP001056.1-201ENST00000411956 SLC16A10Q8TF71 515 aa19.96■□□□□ 0.79
AP001056.1-201ENST00000411956 ALDH1L1O75891 902 aa19.95■□□□□ 0.78
AP001056.1-201ENST00000411956 TRIM28Q13263 835 aaKnown RBP19.95■□□□□ 0.78
AP001056.1-201ENST00000411956 NFIXQ14938 502 aa19.95■□□□□ 0.78
AP001056.1-201ENST00000411956 PARP10Q53GL7 1025 aa19.95■□□□□ 0.78
AP001056.1-201ENST00000411956 NLRP10Q86W26 655 aa19.95■□□□□ 0.78
AP001056.1-201ENST00000411956 NLGN1Q8N2Q7 840 aa19.95■□□□□ 0.78
AP001056.1-201ENST00000411956 CARMIL3Q8ND23 1372 aa19.95■□□□□ 0.78
AP001056.1-201ENST00000411956 TM4SF1P30408 202 aa19.94■□□□□ 0.78
AP001056.1-201ENST00000411956 MVPQ14764 893 aaKnown RBP19.94■□□□□ 0.78
AP001056.1-201ENST00000411956 ITPRIPQ8IWB1 547 aa19.94■□□□□ 0.78
AP001056.1-201ENST00000411956 CCDC191Q8NCU4 936 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms