RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 VAC14Q08AM6 782 aa6.09□□□□□ -1.43
HMGB3P2-201ENST00000411913 C8orf86Q6ZUL3 223 aa6.09□□□□□ -1.43
HMGB3P2-201ENST00000411913 MICALL1Q8N3F8 863 aa6.09□□□□□ -1.43
HMGB3P2-201ENST00000411913 MDFIQ99750 246 aa6.09□□□□□ -1.43
HMGB3P2-201ENST00000411913 PRDM6Q9NQX0 595 aa6.09□□□□□ -1.43
HMGB3P2-201ENST00000411913 H2AFB1P0C5Y9 115 aa6.08□□□□□ -1.44
HMGB3P2-201ENST00000411913 H2AFB2P0C5Z0 115 aa6.08□□□□□ -1.44
HMGB3P2-201ENST00000411913 IRF5Q13568 498 aa6.08□□□□□ -1.44
HMGB3P2-201ENST00000411913 COL9A3Q14050 684 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P2-201ENST00000411913 LRP8Q14114 963 aa6.08□□□□□ -1.44
HMGB3P2-201ENST00000411913 TNFRSF25Q93038 417 aa6.08□□□□□ -1.44
HMGB3P2-201ENST00000411913 L3MBTL2Q969R5 705 aa6.08□□□□□ -1.44
HMGB3P2-201ENST00000411913 SLC30A3Q99726 388 aa6.08□□□□□ -1.44
HMGB3P2-201ENST00000411913 ZNF232Q9UNY5 417 aa6.08□□□□□ -1.44
HMGB3P2-201ENST00000411913 STARD13Q9Y3M8 1113 aa6.08□□□□□ -1.44
HMGB3P2-201ENST00000411913 ADH7P40394 386 aa6.07□□□□□ -1.44
HMGB3P2-201ENST00000411913 SFSWAPQ12872 951 aaKnown RBP6.07□□□□□ -1.44
HMGB3P2-201ENST00000411913 SEMA3FQ13275 785 aa6.07□□□□□ -1.44
HMGB3P2-201ENST00000411913 KRTAP4-12Q9BQ66 201 aa6.07□□□□□ -1.44
HMGB3P2-201ENST00000411913 NID1P14543 1247 aa6.06□□□□□ -1.44
HMGB3P2-201ENST00000411913 PSME1Q06323 249 aa6.06□□□□□ -1.44
HMGB3P2-201ENST00000411913 SPEM2Q0P670 501 aa6.06□□□□□ -1.44
HMGB3P2-201ENST00000411913 SCHIP1Q9P0W5 487 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P2-201ENST00000411913 BTBD11A6QL63 1104 aa6.05□□□□□ -1.44
HMGB3P2-201ENST00000411913 HYAL3O43820 417 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P2-201ENST00000411913 LILRB5O75023 590 aa6.05□□□□□ -1.44
HMGB3P2-201ENST00000411913 NOS2P35228 1153 aa6.05□□□□□ -1.44
HMGB3P2-201ENST00000411913 RAC1P63000 192 aa6.05□□□□□ -1.44
HMGB3P2-201ENST00000411913 ADGRE1Q14246 886 aa6.05□□□□□ -1.44
HMGB3P2-201ENST00000411913 MBTPS1Q14703 1052 aa6.05□□□□□ -1.44
HMGB3P2-201ENST00000411913 RAB44Q7Z6P3 723 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P2-201ENST00000411913 TXNRD3Q86VQ6 643 aa6.05□□□□□ -1.44
HMGB3P2-201ENST00000411913 ZDHHC1Q8WTX9 485 aa6.05□□□□□ -1.44
HMGB3P2-201ENST00000411913 PCDHGA11Q9Y5H2 935 aa6.05□□□□□ -1.44
HMGB3P2-201ENST00000411913 EML1O00423 815 aa6.04□□□□□ -1.44
HMGB3P2-201ENST00000411913 ELNP15502 786 aa6.04□□□□□ -1.44
HMGB3P2-201ENST00000411913 NRG1Q02297 640 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P2-201ENST00000411913 TBC1D8BQ0IIM8 1120 aa6.04□□□□□ -1.44
HMGB3P2-201ENST00000411913 TEAD4Q15561 434 aa6.04□□□□□ -1.44
HMGB3P2-201ENST00000411913 EML3Q32P44 896 aa6.04□□□□□ -1.44
HMGB3P2-201ENST00000411913 RHPN1Q8TCX5 695 aa6.04□□□□□ -1.44
HMGB3P2-201ENST00000411913 TP53INP1Q96A56 240 aa6.04□□□□□ -1.44
HMGB3P2-201ENST00000411913 GPC6Q9Y625 555 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P2-201ENST00000411913 SELPP16109 830 aa6.03□□□□□ -1.44
HMGB3P2-201ENST00000411913 ABL2P42684 1182 aa6.03□□□□□ -1.44
HMGB3P2-201ENST00000411913 WASHC4Q2M389 1173 aa6.03□□□□□ -1.44
HMGB3P2-201ENST00000411913 C20orf204Q6ZNR8 217 aa6.03□□□□□ -1.44
HMGB3P2-201ENST00000411913 SLC9A9Q8IVB4 645 aa6.03□□□□□ -1.44
HMGB3P2-201ENST00000411913 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB3P2-201ENST00000411913 CEP63Q96MT8 703 aa6.03□□□□□ -1.44
HMGB3P2-201ENST00000411913 IGFLR1Q9H665 355 aa6.03□□□□□ -1.44
HMGB3P2-201ENST00000411913 ZNF358Q9NW07 568 aa6.03□□□□□ -1.44
HMGB3P2-201ENST00000411913 USP21Q9UK80 565 aa6.03□□□□□ -1.44
HMGB3P2-201ENST00000411913 NOD1Q9Y239 953 aa6.03□□□□□ -1.44
HMGB3P2-201ENST00000411913 A0A0A0MRY4 1105 aa6.02□□□□□ -1.45
HMGB3P2-201ENST00000411913 SERTM1A2A2V5 107 aa6.02□□□□□ -1.45
HMGB3P2-201ENST00000411913 TBCELQ5QJ74 424 aa6.02□□□□□ -1.45
HMGB3P2-201ENST00000411913 LENG1Q96BZ8 264 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P2-201ENST00000411913 GDPD2Q9HCC8 539 aa6.02□□□□□ -1.45
HMGB3P2-201ENST00000411913 BRD7Q9NPI1 651 aa6.02□□□□□ -1.45
HMGB3P2-201ENST00000411913 ANKIB1Q9P2G1 1089 aa6.02□□□□□ -1.45
HMGB3P2-201ENST00000411913 SFI1A8K8P3 1242 aa6.01□□□□□ -1.45
HMGB3P2-201ENST00000411913 SOX11P35716 441 aa6.01□□□□□ -1.45
HMGB3P2-201ENST00000411913 GTF2IP78347 998 aa6.01□□□□□ -1.45
HMGB3P2-201ENST00000411913 SHISA2Q6UWI4 295 aa6.01□□□□□ -1.45
HMGB3P2-201ENST00000411913 TNS4Q8IZW8 715 aa6.01□□□□□ -1.45
HMGB3P2-201ENST00000411913 BHMTQ93088 406 aa6.01□□□□□ -1.45
HMGB3P2-201ENST00000411913 BCANQ96GW7 911 aa6.01□□□□□ -1.45
HMGB3P2-201ENST00000411913 UBE2OQ9C0C9 1292 aaKnown RBP6.01□□□□□ -1.45
HMGB3P2-201ENST00000411913 JPH1Q9HDC5 661 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P2-201ENST00000411913 KCNH4Q9UQ05 1017 aa6.01□□□□□ -1.45
HMGB3P2-201ENST00000411913 SKIP12755 728 aa6□□□□□ -1.45
HMGB3P2-201ENST00000411913 NUDT8Q8WV74 236 aa6□□□□□ -1.45
HMGB3P2-201ENST00000411913 C7orf43Q8WVR3 580 aa6□□□□□ -1.45
HMGB3P2-201ENST00000411913 HSH2DQ96JZ2 352 aa6□□□□□ -1.45
HMGB3P2-201ENST00000411913 GOLGA2P5Q9HBQ8 144 aa6□□□□□ -1.45
HMGB3P2-201ENST00000411913 CHMP3Q9Y3E7 222 aa6□□□□□ -1.45
HMGB3P2-201ENST00000411913 PIK3CDO00329 1044 aa5.99□□□□□ -1.45
HMGB3P2-201ENST00000411913 LZTS3O60299 673 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P2-201ENST00000411913 HCN4Q9Y3Q4 1203 aa5.99□□□□□ -1.45
HMGB3P2-201ENST00000411913 BRPF1P55201 1214 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P2-201ENST00000411913 KCNQ4P56696 695 aa5.98□□□□□ -1.45
HMGB3P2-201ENST00000411913 SH3PXD2AQ5TCZ1 1133 aa5.98□□□□□ -1.45
HMGB3P2-201ENST00000411913 C1orf53Q5VUE5 145 aa5.98□□□□□ -1.45
HMGB3P2-201ENST00000411913 DMRTC2Q8IXT2 367 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P2-201ENST00000411913 SLC6A14Q9UN76 642 aa5.98□□□□□ -1.45
HMGB3P2-201ENST00000411913 EPHA4P54764 986 aa5.97□□□□□ -1.45
HMGB3P2-201ENST00000411913 PSMA6P60900 246 aaKnown RBP5.97□□□□□ -1.45
HMGB3P2-201ENST00000411913 PSAPL1Q6NUJ1 521 aa5.97□□□□□ -1.45
HMGB3P2-201ENST00000411913 SLC24A1O60721 1099 aa5.96□□□□□ -1.46
HMGB3P2-201ENST00000411913 RGS9O75916 674 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P2-201ENST00000411913 TYRO3Q06418 890 aa5.96□□□□□ -1.46
HMGB3P2-201ENST00000411913 NCOA4Q13772 614 aa5.96□□□□□ -1.46
HMGB3P2-201ENST00000411913 FMR1NBQ8N0W7 255 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P2-201ENST00000411913 ZNF280CQ8ND82 737 aa5.96□□□□□ -1.46
HMGB3P2-201ENST00000411913 KRTAP9-9Q9BYP9 154 aa5.96□□□□□ -1.46
HMGB3P2-201ENST00000411913 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
HMGB3P2-201ENST00000411913 PHACTR1Q9C0D0 580 aa5.96□□□□□ -1.46
HMGB3P2-201ENST00000411913 RNF112Q9ULX5 631 aa5.96□□□□□ -1.46
HMGB3P2-201ENST00000411913 AFF1P51825 1210 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms