RNA–Protein interactions for RNA: ENST00000411788.5

SEMA3C-202, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-202ENST00000411788 USP17L5A8MUK1 530 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 SPATA31C2B4DYI2 1134 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 SHISA8B8ZZ34 492 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 APPP05067 770 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 TPM2P07951 284 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 RGS3P49796 1198 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 USP17L2Q6R6M4 530 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 TAS1R3Q7RTX0 852 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 USP17L1Q7RTZ2 530 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 TRIM50Q86XT4 487 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 EDARADDQ8WWZ3 215 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 KLRG1Q96E93 195 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 PRDM16Q9HAZ2 1276 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 HDAC5Q9UQL6 1122 aa5.62□□□□□ -1.51
SEMA3C-202ENST00000411788 FAM196BA6NMK8 535 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 WASLO00401 505 aaPredicted RBP5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 COL8A1P27658 744 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 ATP1A2P50993 1020 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 ERVK-9P63128 1117 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 SRPK2P78362 688 aaKnown RBP5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 CLN3Q13286 438 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 GRIN2CQ14957 1233 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 EML3Q32P44 896 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 TMCO4Q5TGY1 634 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 LARP1Q6PKG0 1096 aaKnown RBP5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 TBC1D9Q6ZT07 1266 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 CYP2U1Q7Z449 544 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 GOLGA6L1Q8N7Z2 621 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 SIRT1Q96EB6 747 aa5.61□□□□□ -1.51
SEMA3C-202ENST00000411788 GIGYF1O75420 1035 aaPredicted RBP5.6□□□□□ -1.51
SEMA3C-202ENST00000411788 AMPD1P23109 780 aa5.6□□□□□ -1.51
SEMA3C-202ENST00000411788 OS9Q13438 667 aaPredicted RBP5.6□□□□□ -1.51
SEMA3C-202ENST00000411788 CC2D1BQ5T0F9 858 aaKnown RBP5.6□□□□□ -1.51
SEMA3C-202ENST00000411788 FAM43BQ6ZT52 329 aaPredicted RBP5.6□□□□□ -1.51
SEMA3C-202ENST00000411788 MTERF4Q7Z6M4 381 aaKnown RBP5.6□□□□□ -1.51
SEMA3C-202ENST00000411788 ESF1Q9H501 851 aaKnown RBP5.6□□□□□ -1.51
SEMA3C-202ENST00000411788 CEP126Q9P2H0 1117 aa5.6□□□□□ -1.51
SEMA3C-202ENST00000411788 KIF20AO95235 890 aa5.59□□□□□ -1.51
SEMA3C-202ENST00000411788 SLC20A2Q08357 652 aa5.59□□□□□ -1.51
SEMA3C-202ENST00000411788 LBRQ14739 615 aaKnown RBP5.59□□□□□ -1.51
SEMA3C-202ENST00000411788 C1orf229Q6ZS94 237 aaPredicted RBP5.59□□□□□ -1.51
SEMA3C-202ENST00000411788 PLPP7Q8NBV4 271 aa5.59□□□□□ -1.51
SEMA3C-202ENST00000411788 TMEM51Q9NW97 253 aa5.59□□□□□ -1.51
SEMA3C-202ENST00000411788 MTMR7Q9Y216 660 aa5.59□□□□□ -1.51
SEMA3C-202ENST00000411788 GOLGA6L3A6NEY3 463 aa5.58□□□□□ -1.52
SEMA3C-202ENST00000411788 C1QTNF9BB2RNN3 333 aa5.58□□□□□ -1.52
SEMA3C-202ENST00000411788 GNB5O14775 395 aa5.58□□□□□ -1.52
SEMA3C-202ENST00000411788 LINC00114Q6XXX2 140 aa5.58□□□□□ -1.52
SEMA3C-202ENST00000411788 NBPF11Q86T75 865 aa5.58□□□□□ -1.52
SEMA3C-202ENST00000411788 ZNF830Q96NB3 372 aaPredicted RBP5.58□□□□□ -1.52
SEMA3C-202ENST00000411788 YY1AP1Q9H869 796 aa5.58□□□□□ -1.52
SEMA3C-202ENST00000411788 CWC22Q9HCG8 908 aaKnown RBP5.58□□□□□ -1.52
SEMA3C-202ENST00000411788 NOP53Q9NZM5 478 aaKnown RBP5.58□□□□□ -1.52
SEMA3C-202ENST00000411788 DOLKQ9UPQ8 538 aa5.58□□□□□ -1.52
SEMA3C-202ENST00000411788 NOD1Q9Y239 953 aa5.58□□□□□ -1.52
SEMA3C-202ENST00000411788 A0A1B0GTH6 734 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 TTC36A6NLP5 189 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L15C9J2P7 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L10C9JJH3 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L13C9JLJ4 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L12C9JPN9 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L11C9JVI0 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L21D6R901 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L18D6R9N7 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L22D6RA61 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L17D6RBQ6 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L19D6RCP7 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L20D6RJB6 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 BMP4P12644 408 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 USP17L24Q0WX57 530 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 NCOA4Q13772 614 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 SWI5Q1ZZU3 235 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 NBPF1Q3BBV0 1214 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 HSP90AB4PQ58FF6 505 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 KANK4Q5T7N3 995 aaPredicted RBP5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 CASC1Q6TDU7 716 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 PGBD3Q8N328 593 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 ZNF526Q8TF50 670 aaPredicted RBP5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 KRTAP9-2Q9BYQ4 174 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 PNNQ9H307 717 aaKnown RBP5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 SUV39H2Q9H5I1 410 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 ARHGEF10LQ9HCE6 1279 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 GPAMQ9HCL2 828 aa5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 MKRN1Q9UHC7 482 aaKnown RBP5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 NOVA2Q9UNW9 492 aaKnown RBP5.57□□□□□ -1.52
SEMA3C-202ENST00000411788 THBS1P07996 1170 aa5.56□□□□□ -1.52
SEMA3C-202ENST00000411788 RASA1P20936 1047 aa5.56□□□□□ -1.52
SEMA3C-202ENST00000411788 RALBP1Q15311 655 aa5.56□□□□□ -1.52
SEMA3C-202ENST00000411788 SLCO4C1Q6ZQN7 724 aa5.56□□□□□ -1.52
SEMA3C-202ENST00000411788 CD163Q86VB7 1156 aa5.56□□□□□ -1.52
SEMA3C-202ENST00000411788 FAM200AQ8TCP9 573 aa5.56□□□□□ -1.52
SEMA3C-202ENST00000411788 CDCA7Q9BWT1 371 aaPredicted RBP5.56□□□□□ -1.52
SEMA3C-202ENST00000411788 CHIC2Q9UKJ5 165 aa5.56□□□□□ -1.52
SEMA3C-202ENST00000411788 ATXN7L1Q9ULK2 861 aaPredicted RBP5.56□□□□□ -1.52
SEMA3C-202ENST00000411788 TMEM88BA6NKF7 163 aa5.55□□□□□ -1.52
SEMA3C-202ENST00000411788 PIK3CDO00329 1044 aa5.55□□□□□ -1.52
SEMA3C-202ENST00000411788 TCERG1O14776 1098 aaKnown RBP5.55□□□□□ -1.52
SEMA3C-202ENST00000411788 CCDC27Q2M243 656 aa5.55□□□□□ -1.52
SEMA3C-202ENST00000411788 EFHC2Q5JST6 749 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms