RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 RC3H1Q5TC82 1133 aaKnown RBP11.29□□□□□ -0.6
LINC02539-201ENST00000411615 TSPYL6Q8N831 410 aa11.29□□□□□ -0.6
LINC02539-201ENST00000411615 CAMKK2Q96RR4 588 aa11.29□□□□□ -0.6
LINC02539-201ENST00000411615 CCNL1Q9UK58 526 aaPredicted RBP11.29□□□□□ -0.6
LINC02539-201ENST00000411615 TAF1LQ8IZX4 1826 aa11.29□□□□□ -0.6
LINC02539-201ENST00000411615 C5P01031 1676 aa11.29□□□□□ -0.6
LINC02539-201ENST00000411615 CYP19A1P11511 503 aaPredicted RBP11.28□□□□□ -0.6
LINC02539-201ENST00000411615 KRT24Q2M2I5 525 aa11.28□□□□□ -0.6
LINC02539-201ENST00000411615 ALDH1L2Q3SY69 923 aa11.28□□□□□ -0.6
LINC02539-201ENST00000411615 CCDC30Q5VVM6 783 aa11.28□□□□□ -0.6
LINC02539-201ENST00000411615 DNAJC10Q8IXB1 793 aa11.28□□□□□ -0.6
LINC02539-201ENST00000411615 USP16Q9Y5T5 823 aa11.28□□□□□ -0.6
LINC02539-201ENST00000411615 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
LINC02539-201ENST00000411615 CNTNAP4Q9C0A0 1308 aa11.28□□□□□ -0.6
LINC02539-201ENST00000411615 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
LINC02539-201ENST00000411615 ITPK1Q13572 414 aa11.27□□□□□ -0.61
LINC02539-201ENST00000411615 HDGFL1Q5TGJ6 251 aa11.27□□□□□ -0.61
LINC02539-201ENST00000411615 PDCD7Q8N8D1 485 aaKnown RBP11.27□□□□□ -0.61
LINC02539-201ENST00000411615 SCUBE2Q9NQ36 999 aa11.27□□□□□ -0.61
LINC02539-201ENST00000411615 LRRC4BQ9NT99 713 aa11.27□□□□□ -0.61
LINC02539-201ENST00000411615 RREB1Q92766 1687 aa11.27□□□□□ -0.61
LINC02539-201ENST00000411615 PRAMEF22A3QJZ6 481 aa11.26□□□□□ -0.61
LINC02539-201ENST00000411615 ELL2O00472 640 aaPredicted RBP11.26□□□□□ -0.61
LINC02539-201ENST00000411615 EN1Q05925 392 aaPredicted RBP11.26□□□□□ -0.61
LINC02539-201ENST00000411615 DDX21Q9NR30 783 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC02539-201ENST00000411615 DBF4Q9UBU7 674 aaPredicted RBP11.26□□□□□ -0.61
LINC02539-201ENST00000411615 CRKLP46109 303 aaKnown RBP11.25□□□□□ -0.61
LINC02539-201ENST00000411615 EZH2Q15910 746 aaKnown RBP11.25□□□□□ -0.61
LINC02539-201ENST00000411615 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
LINC02539-201ENST00000411615 INTS5Q6P9B9 1019 aaKnown RBP11.25□□□□□ -0.61
LINC02539-201ENST00000411615 LINC00116Q8NCU8 138 aa11.25□□□□□ -0.61
LINC02539-201ENST00000411615 STK31Q9BXU1 1019 aa11.25□□□□□ -0.61
LINC02539-201ENST00000411615 CCDC87Q9NVE4 849 aa11.25□□□□□ -0.61
LINC02539-201ENST00000411615 C4BP0C0L5 1744 aa11.25□□□□□ -0.61
LINC02539-201ENST00000411615 MYH14Q7Z406 1995 aaKnown RBP11.25□□□□□ -0.61
LINC02539-201ENST00000411615 EIF2S2P20042 333 aaKnown RBP11.24□□□□□ -0.61
LINC02539-201ENST00000411615 IL6STP40189 918 aaPredicted RBP11.24□□□□□ -0.61
LINC02539-201ENST00000411615 RARSP54136 660 aaKnown RBP11.24□□□□□ -0.61
LINC02539-201ENST00000411615 PDAP1Q13442 181 aaKnown RBP11.24□□□□□ -0.61
LINC02539-201ENST00000411615 PDIA6Q15084 440 aa11.24□□□□□ -0.61
LINC02539-201ENST00000411615 MAMSTRQ6ZN01 415 aa11.24□□□□□ -0.61
LINC02539-201ENST00000411615 DEFB132Q7Z7B7 95 aa11.24□□□□□ -0.61
LINC02539-201ENST00000411615 OCEL1Q9H607 264 aa11.24□□□□□ -0.61
LINC02539-201ENST00000411615 HYPKQ9NX55 129 aa11.24□□□□□ -0.61
LINC02539-201ENST00000411615 NBPF26B4DH59 902 aa11.23□□□□□ -0.61
LINC02539-201ENST00000411615 RPS6KA4O75676 772 aa11.23□□□□□ -0.61
LINC02539-201ENST00000411615 NBPF14Q5TI25 921 aa11.23□□□□□ -0.61
LINC02539-201ENST00000411615 NBPF10Q6P3W6 841 aaKnown RBP11.23□□□□□ -0.61
LINC02539-201ENST00000411615 LRP10Q7Z4F1 713 aa11.23□□□□□ -0.61
LINC02539-201ENST00000411615 NBPF15Q8N660 670 aa11.23□□□□□ -0.61
LINC02539-201ENST00000411615 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
LINC02539-201ENST00000411615 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
LINC02539-201ENST00000411615 RCAN3Q9UKA8 241 aa11.23□□□□□ -0.61
LINC02539-201ENST00000411615 RGL2O15211 777 aa11.22□□□□□ -0.61
LINC02539-201ENST00000411615 A1BGP04217 495 aa11.22□□□□□ -0.61
LINC02539-201ENST00000411615 EIF5P55010 431 aaKnown RBP11.22□□□□□ -0.61
LINC02539-201ENST00000411615 KCNQ4P56696 695 aa11.22□□□□□ -0.61
LINC02539-201ENST00000411615 NUP188Q5SRE5 1749 aa11.22□□□□□ -0.61
LINC02539-201ENST00000411615 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
LINC02539-201ENST00000411615 CHPF2Q9P2E5 772 aa11.22□□□□□ -0.61
LINC02539-201ENST00000411615 QSER1Q2KHR3 1735 aa11.21□□□□□ -0.61
LINC02539-201ENST00000411615 A0A087WZG4 1122 aa11.21□□□□□ -0.61
LINC02539-201ENST00000411615 CENPBP07199 599 aaPredicted RBP11.21□□□□□ -0.61
LINC02539-201ENST00000411615 FLAD1Q8NFF5 587 aa11.21□□□□□ -0.61
LINC02539-201ENST00000411615 ARHGAP45Q92619 1136 aa11.21□□□□□ -0.61
LINC02539-201ENST00000411615 AK7Q96M32 723 aa11.21□□□□□ -0.61
LINC02539-201ENST00000411615 ZBTB1Q9Y2K1 713 aa11.21□□□□□ -0.61
LINC02539-201ENST00000411615 RTCBQ9Y3I0 505 aaKnown RBP11.21□□□□□ -0.61
LINC02539-201ENST00000411615 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.62
LINC02539-201ENST00000411615 PTPRCP08575 1304 aa11.2□□□□□ -0.62
LINC02539-201ENST00000411615 KIF16BQ96L93 1317 aa11.2□□□□□ -0.62
LINC02539-201ENST00000411615 POTEMA6NI47 508 aa11.2□□□□□ -0.62
LINC02539-201ENST00000411615 CANXP27824 592 aaKnown RBP11.2□□□□□ -0.62
LINC02539-201ENST00000411615 SSFA2P28290 1259 aa11.2□□□□□ -0.62
LINC02539-201ENST00000411615 MKRN3Q13064 507 aaKnown RBP11.2□□□□□ -0.62
LINC02539-201ENST00000411615 NPM2Q86SE8 214 aaKnown RBP11.2□□□□□ -0.62
LINC02539-201ENST00000411615 SLAIN1Q8ND83 568 aa11.2□□□□□ -0.62
LINC02539-201ENST00000411615 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
LINC02539-201ENST00000411615 SMC4Q9NTJ3 1288 aa11.2□□□□□ -0.62
LINC02539-201ENST00000411615 ERVV-1B6SEH8 477 aa11.19□□□□□ -0.62
LINC02539-201ENST00000411615 GNPATO15228 680 aa11.19□□□□□ -0.62
LINC02539-201ENST00000411615 IPO8O15397 1037 aaKnown RBP11.19□□□□□ -0.62
LINC02539-201ENST00000411615 MYL6BP14649 208 aa11.19□□□□□ -0.62
LINC02539-201ENST00000411615 SLC15A2Q16348 729 aa11.19□□□□□ -0.62
LINC02539-201ENST00000411615 PROSER3Q2NL68 480 aa11.19□□□□□ -0.62
LINC02539-201ENST00000411615 STK32BQ9NY57 414 aa11.19□□□□□ -0.62
LINC02539-201ENST00000411615 BCAR3O75815 825 aa11.18□□□□□ -0.62
LINC02539-201ENST00000411615 DDX58O95786 925 aaKnown RBP11.18□□□□□ -0.62
LINC02539-201ENST00000411615 FLIIQ13045 1269 aa11.18□□□□□ -0.62
LINC02539-201ENST00000411615 TRAPPC3LQ5T215 181 aa11.18□□□□□ -0.62
LINC02539-201ENST00000411615 COPS6Q7L5N1 327 aa11.18□□□□□ -0.62
LINC02539-201ENST00000411615 COL15A1P39059 1388 aa11.17□□□□□ -0.62
LINC02539-201ENST00000411615 TCERG1O14776 1098 aaKnown RBP11.17□□□□□ -0.62
LINC02539-201ENST00000411615 ZNF827Q17R98 1081 aa11.17□□□□□ -0.62
LINC02539-201ENST00000411615 POTEGQ6S5H5 508 aa11.17□□□□□ -0.62
LINC02539-201ENST00000411615 CLEC4GQ6UXB4 293 aa11.17□□□□□ -0.62
LINC02539-201ENST00000411615 ANKRD13DQ6ZTN6 518 aa11.17□□□□□ -0.62
LINC02539-201ENST00000411615 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.17□□□□□ -0.62
LINC02539-201ENST00000411615 PLBD2Q8NHP8 589 aa11.17□□□□□ -0.62
LINC02539-201ENST00000411615 XAGE3Q8WTP9 111 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms