RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 FOXD4L1Q9NU39 408 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 ZDHHC9Q9Y397 364 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 PRR36Q9H6K5 1346 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 EXOC5O00471 708 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 COL23A1Q86Y22 540 aaPredicted RBP4.05□□□□□ -1.76
RGPD3-202ENST00000409886 STRN4Q9NRL3 753 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 LRRC4BQ9NT99 713 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 RRP7AQ9Y3A4 280 aaKnown RBP4.05□□□□□ -1.76
RGPD3-202ENST00000409886 FGD1P98174 961 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 ATP2B3Q16720 1220 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 RGL3Q3MIN7 710 aa4.05□□□□□ -1.76
RGPD3-202ENST00000409886 REM2Q8IYK8 340 aaPredicted RBP4.05□□□□□ -1.76
RGPD3-202ENST00000409886 WDR33Q9C0J8 1336 aaKnown RBP4.04□□□□□ -1.76
RGPD3-202ENST00000409886 ZNF646O15015 1829 aaPredicted RBP4.04□□□□□ -1.76
RGPD3-202ENST00000409886 A0A1W2PPC1 479 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 APAF1O14727 1248 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 BRPF1P55201 1214 aaPredicted RBP4.04□□□□□ -1.76
RGPD3-202ENST00000409886 AMER1Q5JTC6 1135 aaPredicted RBP4.04□□□□□ -1.76
RGPD3-202ENST00000409886 SCN11AQ9UI33 1791 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 TFCP2L1Q9NZI6 479 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 NUP155O75694 1391 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 PLEKHG3A1L390 1219 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 ESPNB1AK53 854 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 BAZ2BQ9UIF8 2168 aaKnown RBP4.04□□□□□ -1.76
RGPD3-202ENST00000409886 HTRA3P83110 453 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 FAM43AQ8N2R8 423 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 TMC1Q8TDI8 760 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 DDRGK1Q96HY6 314 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 L3MBTL3Q96JM7 780 aaPredicted RBP4.04□□□□□ -1.76
RGPD3-202ENST00000409886 STAC3Q96MF2 364 aa4.04□□□□□ -1.76
RGPD3-202ENST00000409886 PDZRN3Q9UPQ7 1066 aa4.03□□□□□ -1.76
RGPD3-202ENST00000409886 MCM4P33991 863 aa4.03□□□□□ -1.76
RGPD3-202ENST00000409886 NOM1Q5C9Z4 860 aaKnown RBP4.03□□□□□ -1.76
RGPD3-202ENST00000409886 NLRP13Q86W25 1043 aa4.03□□□□□ -1.76
RGPD3-202ENST00000409886 SIRT2Q8IXJ6 389 aa4.03□□□□□ -1.76
RGPD3-202ENST00000409886 KLHL34Q8N239 644 aa4.03□□□□□ -1.76
RGPD3-202ENST00000409886 CHMP4CQ96CF2 233 aa4.03□□□□□ -1.76
RGPD3-202ENST00000409886 PAPPA2Q9BXP8 1791 aa4.03□□□□□ -1.76
RGPD3-202ENST00000409886 AKAP11Q9UKA4 1901 aa4.03□□□□□ -1.76
RGPD3-202ENST00000409886 CAPN2P17655 700 aa4.03□□□□□ -1.76
RGPD3-202ENST00000409886 PLA2G5P39877 138 aa4.03□□□□□ -1.76
RGPD3-202ENST00000409886 CCDC87Q9NVE4 849 aa4.03□□□□□ -1.76
RGPD3-202ENST00000409886 C14orf93Q9H972 538 aaKnown RBP4.03□□□□□ -1.77
RGPD3-202ENST00000409886 CERS3Q8IU89 383 aa4.02□□□□□ -1.77
RGPD3-202ENST00000409886 OTUD7AQ8TE49 926 aaPredicted RBP4.02□□□□□ -1.77
RGPD3-202ENST00000409886 ST7Q9NRC1 585 aa4.02□□□□□ -1.77
RGPD3-202ENST00000409886 TCERG1O14776 1098 aaKnown RBP4.02□□□□□ -1.77
RGPD3-202ENST00000409886 RTL5Q5HYW3 569 aaPredicted RBP4.02□□□□□ -1.77
RGPD3-202ENST00000409886 LMOD2Q6P5Q4 547 aa4.02□□□□□ -1.77
RGPD3-202ENST00000409886 GAS2L2Q8NHY3 880 aa4.02□□□□□ -1.77
RGPD3-202ENST00000409886 BEGAINQ9BUH8 593 aa4.02□□□□□ -1.77
RGPD3-202ENST00000409886 AFDNP55196 1824 aaKnown RBP4.02□□□□□ -1.77
RGPD3-202ENST00000409886 CGNL1Q0VF96 1302 aa4.02□□□□□ -1.77
RGPD3-202ENST00000409886 IQCA1LA6NCM1 817 aa4.02□□□□□ -1.77
RGPD3-202ENST00000409886 LMNB1P20700 586 aa4.02□□□□□ -1.77
RGPD3-202ENST00000409886 MAP3K19Q56UN5 1328 aa4.02□□□□□ -1.77
RGPD3-202ENST00000409886 DSPP15924 2871 aaKnown RBP4.01□□□□□ -1.77
RGPD3-202ENST00000409886 ADRA2BP18089 450 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 KIAA1211Q6ZU35 1233 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 TBC1D32Q96NH3 1257 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 USP35Q9P2H5 1018 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 NEUROD2Q15784 382 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 DEFB115Q30KQ5 88 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 PTF1AQ7RTS3 328 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 ZGPATQ8N5A5 531 aaKnown RBP4.01□□□□□ -1.77
RGPD3-202ENST00000409886 SLC4A1APQ9BWU0 796 aaKnown RBP4.01□□□□□ -1.77
RGPD3-202ENST00000409886 PRDM6Q9NQX0 595 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 RBM27Q9P2N5 1060 aaKnown RBP4.01□□□□□ -1.77
RGPD3-202ENST00000409886 WASLO00401 505 aaPredicted RBP4.01□□□□□ -1.77
RGPD3-202ENST00000409886 DGKZQ13574 1117 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 KRT24Q2M2I5 525 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 ARHGAP27Q6ZUM4 889 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 KCNH5Q8NCM2 988 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 FANCGO15287 622 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 PRR29P0C7W0 189 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 RNF181Q9P0P0 153 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 USP31Q70CQ4 1352 aa4.01□□□□□ -1.77
RGPD3-202ENST00000409886 SSC5DA1L4H1 1573 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 HSP90AA2PQ14568 343 aaPredicted RBP4□□□□□ -1.77
RGPD3-202ENST00000409886 RBSNQ9H1K0 784 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 MKRN1Q9UHC7 482 aaKnown RBP4□□□□□ -1.77
RGPD3-202ENST00000409886 SLC17A8Q8NDX2 589 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 A0A087WWV3 80 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 HOXD11P31277 338 aaPredicted RBP4□□□□□ -1.77
RGPD3-202ENST00000409886 CHRNA2Q15822 529 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 SMARCC1Q92922 1105 aaPredicted RBP4□□□□□ -1.77
RGPD3-202ENST00000409886 TMEM63CQ9P1W3 806 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 PIM2Q9P1W9 311 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 TLL2Q9Y6L7 1015 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 ERBB3P21860 1342 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 POTECB2RU33 542 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 DALRD3Q5D0E6 543 aaKnown RBP4□□□□□ -1.77
RGPD3-202ENST00000409886 WAPLQ7Z5K2 1190 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 SCN7AQ01118 1682 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 COL12A1Q99715 3063 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 KNL1Q8NG31 2342 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 ANKRD13DQ6ZTN6 518 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 TOM1L2Q6ZVM7 507 aa4□□□□□ -1.77
RGPD3-202ENST00000409886 TSR2Q969E8 191 aaKnown RBP4□□□□□ -1.77
RGPD3-202ENST00000409886 GDPD2Q9HCC8 539 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms