RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 TNS3Q68CZ2 1445 aa9.4□□□□□ -0.9
CXCR4-202ENST00000409817 ANKRD24Q8TF21 1146 aa9.4□□□□□ -0.91
CXCR4-202ENST00000409817 GOPCQ9HD26 462 aa9.4□□□□□ -0.91
CXCR4-202ENST00000409817 CCT4P50991 539 aaKnown RBP9.39□□□□□ -0.91
CXCR4-202ENST00000409817 XPCQ01831 940 aaPredicted RBP9.39□□□□□ -0.91
CXCR4-202ENST00000409817 NUCB1Q02818 461 aa9.39□□□□□ -0.91
CXCR4-202ENST00000409817 FBXW7Q969H0 707 aa9.39□□□□□ -0.91
CXCR4-202ENST00000409817 FAM208AQ9UK61 1670 aaKnown RBP9.39□□□□□ -0.91
CXCR4-202ENST00000409817 KRT24Q2M2I5 525 aa9.38□□□□□ -0.91
CXCR4-202ENST00000409817 RPAP2Q8IXW5 612 aaPredicted RBP9.38□□□□□ -0.91
CXCR4-202ENST00000409817 ERBB3P21860 1342 aa9.38□□□□□ -0.91
CXCR4-202ENST00000409817 PXDNQ92626 1479 aa9.38□□□□□ -0.91
CXCR4-202ENST00000409817 HOXB3P14651 431 aaPredicted RBP9.38□□□□□ -0.91
CXCR4-202ENST00000409817 MDM2Q00987 491 aaPredicted RBP9.38□□□□□ -0.91
CXCR4-202ENST00000409817 C1orf141Q5JVX7 400 aa9.38□□□□□ -0.91
CXCR4-202ENST00000409817 NPM2Q86SE8 214 aaKnown RBP9.38□□□□□ -0.91
CXCR4-202ENST00000409817 USHBP1Q8N6Y0 703 aa9.38□□□□□ -0.91
CXCR4-202ENST00000409817 KHSRPQ92945 711 aaKnown RBP eCLIP9.38□□□□□ -0.91
CXCR4-202ENST00000409817 CPDO75976 1380 aa9.38□□□□□ -0.91
CXCR4-202ENST00000409817 STRCQ7RTU9 1775 aa9.37□□□□□ -0.91
CXCR4-202ENST00000409817 HSPA2P54652 639 aa9.37□□□□□ -0.91
CXCR4-202ENST00000409817 ZNF530Q6P9A1 599 aaPredicted RBP9.37□□□□□ -0.91
CXCR4-202ENST00000409817 CHD1LQ86WJ1 897 aa9.37□□□□□ -0.91
CXCR4-202ENST00000409817 ZMYND15Q9H091 742 aa9.37□□□□□ -0.91
CXCR4-202ENST00000409817 UPF2Q9HAU5 1272 aaKnown RBP9.37□□□□□ -0.91
CXCR4-202ENST00000409817 MIS18AQ9NYP9 233 aa9.37□□□□□ -0.91
CXCR4-202ENST00000409817 SPATA31A3Q5VYP0 1347 aa9.37□□□□□ -0.91
CXCR4-202ENST00000409817 PXDNLA1KZ92 1463 aa9.37□□□□□ -0.91
CXCR4-202ENST00000409817 RGPD2P0DJD1 1756 aa9.37□□□□□ -0.91
CXCR4-202ENST00000409817 KDM3BQ7LBC6 1761 aa9.37□□□□□ -0.91
CXCR4-202ENST00000409817 ZBTB7CA1YPR0 619 aa9.36□□□□□ -0.91
CXCR4-202ENST00000409817 ONECUT3O60422 494 aaPredicted RBP9.36□□□□□ -0.91
CXCR4-202ENST00000409817 TEFQ10587 303 aa9.36□□□□□ -0.91
CXCR4-202ENST00000409817 XIRP1Q702N8 1843 aaKnown RBP9.36□□□□□ -0.91
CXCR4-202ENST00000409817 METTL3Q86U44 580 aaKnown RBP9.36□□□□□ -0.91
CXCR4-202ENST00000409817 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
CXCR4-202ENST00000409817 LRRC59Q96AG4 307 aaKnown RBP9.36□□□□□ -0.91
CXCR4-202ENST00000409817 ADAMTS7Q9UKP4 1686 aa9.36□□□□□ -0.91
CXCR4-202ENST00000409817 EIF5BO60841 1220 aaKnown RBP9.36□□□□□ -0.91
CXCR4-202ENST00000409817 C6orf132Q5T0Z8 1188 aa9.36□□□□□ -0.91
CXCR4-202ENST00000409817 PADI6Q6TGC4 694 aa9.36□□□□□ -0.91
CXCR4-202ENST00000409817 ANKRD44Q8N8A2 993 aa9.36□□□□□ -0.91
CXCR4-202ENST00000409817 TTC13Q8NBP0 860 aa9.36□□□□□ -0.91
CXCR4-202ENST00000409817 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
CXCR4-202ENST00000409817 COL18A1P39060 1754 aa9.35□□□□□ -0.91
CXCR4-202ENST00000409817 N4BP2Q86UW6 1770 aaPredicted RBP9.35□□□□□ -0.91
CXCR4-202ENST00000409817 CRYBG1Q9Y4K1 1723 aa9.35□□□□□ -0.91
CXCR4-202ENST00000409817 POTEB2H3BUK9 544 aa9.35□□□□□ -0.91
CXCR4-202ENST00000409817 NUDT7P0C024 238 aa9.35□□□□□ -0.91
CXCR4-202ENST00000409817 CLCN1P35523 988 aa9.35□□□□□ -0.91
CXCR4-202ENST00000409817 FLIIQ13045 1269 aa9.35□□□□□ -0.91
CXCR4-202ENST00000409817 AXIN2Q9Y2T1 843 aa9.35□□□□□ -0.91
CXCR4-202ENST00000409817 ATP10DQ9P241 1426 aa9.35□□□□□ -0.91
CXCR4-202ENST00000409817 RNMTO43148 476 aaKnown RBP9.34□□□□□ -0.91
CXCR4-202ENST00000409817 HMMRO75330 724 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 EIF4A1P60842 406 aaKnown RBP9.34□□□□□ -0.91
CXCR4-202ENST00000409817 RAPGEF4Q8WZA2 1011 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 DCTPP1Q9H773 170 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 ADGRG1Q9Y653 693 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 BTBD11A6QL63 1104 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 GNAI3P08754 354 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 ZC3H6P61129 1189 aaKnown RBP9.34□□□□□ -0.91
CXCR4-202ENST00000409817 ARSIQ5FYB1 569 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 HDGFL1Q5TGJ6 251 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 BRINP3Q76B58 766 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 SIRT2Q8IXJ6 389 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 ZDHHC16Q969W1 377 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 SPG7Q9UQ90 795 aa9.34□□□□□ -0.91
CXCR4-202ENST00000409817 RGPD5Q99666 1765 aa9.33□□□□□ -0.92
CXCR4-202ENST00000409817 SOS2Q07890 1332 aaPredicted RBP9.33□□□□□ -0.92
CXCR4-202ENST00000409817 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
CXCR4-202ENST00000409817 FKBP5Q13451 457 aaPredicted RBP9.33□□□□□ -0.92
CXCR4-202ENST00000409817 BMP2KLQ5H9B9 411 aa9.33□□□□□ -0.92
CXCR4-202ENST00000409817 GPR153Q6NV75 609 aa9.33□□□□□ -0.92
CXCR4-202ENST00000409817 CEP85Q6P2H3 762 aa9.33□□□□□ -0.92
CXCR4-202ENST00000409817 ZNF454Q8N9F8 522 aa9.33□□□□□ -0.92
CXCR4-202ENST00000409817 PXYLP1Q8TE99 480 aa9.33□□□□□ -0.92
CXCR4-202ENST00000409817 C1orf115Q9H7X2 142 aa9.33□□□□□ -0.92
CXCR4-202ENST00000409817 LGR6Q9HBX8 967 aa9.33□□□□□ -0.92
CXCR4-202ENST00000409817 SSTR3P32745 418 aaPredicted RBP9.32□□□□□ -0.92
CXCR4-202ENST00000409817 ANKRD45Q5TZF3 282 aa9.32□□□□□ -0.92
CXCR4-202ENST00000409817 G2E3Q7L622 706 aa9.32□□□□□ -0.92
CXCR4-202ENST00000409817 LNPKQ9C0E8 428 aa9.32□□□□□ -0.92
CXCR4-202ENST00000409817 SLAIN2Q9P270 581 aa9.32□□□□□ -0.92
CXCR4-202ENST00000409817 SIPA1L3O60292 1781 aaPredicted RBP9.32□□□□□ -0.92
CXCR4-202ENST00000409817 HEG1Q9ULI3 1381 aa9.32□□□□□ -0.92
CXCR4-202ENST00000409817 GNAI2P04899 355 aa9.32□□□□□ -0.92
CXCR4-202ENST00000409817 HSP90AB1P08238 724 aaKnown RBP9.32□□□□□ -0.92
CXCR4-202ENST00000409817 SH3D19Q5HYK7 790 aa9.32□□□□□ -0.92
CXCR4-202ENST00000409817 MPRIPQ6WCQ1 1025 aa9.32□□□□□ -0.92
CXCR4-202ENST00000409817 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
CXCR4-202ENST00000409817 MEIS3Q99687 375 aa9.32□□□□□ -0.92
CXCR4-202ENST00000409817 FAM217BQ9NTX9 383 aaPredicted RBP9.32□□□□□ -0.92
CXCR4-202ENST00000409817 NLRP2Q9NX02 1062 aa9.32□□□□□ -0.92
CXCR4-202ENST00000409817 SLC4A10Q6U841 1118 aa9.31□□□□□ -0.92
CXCR4-202ENST00000409817 DBF4Q9UBU7 674 aaPredicted RBP9.31□□□□□ -0.92
CXCR4-202ENST00000409817 CSB-PGBD3P0DP91 1061 aa9.3□□□□□ -0.92
CXCR4-202ENST00000409817 IFNL2Q8IZJ0 200 aa9.3□□□□□ -0.92
CXCR4-202ENST00000409817 TBC1D32Q96NH3 1257 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms