RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 ITGB4P16144 1822 aa24.23■■□□□ 1.47
LIMS2-207ENST00000409808 GNAI3P08754 354 aa24.23■■□□□ 1.47
LIMS2-207ENST00000409808 XAGE3Q8WTP9 111 aa24.23■■□□□ 1.47
LIMS2-207ENST00000409808 ASAP1Q9ULH1 1129 aa24.23■■□□□ 1.47
LIMS2-207ENST00000409808 LRRFIP2Q9Y608 721 aaKnown RBP24.23■■□□□ 1.47
LIMS2-207ENST00000409808 SPATA31A5Q5VU36 1347 aa24.23■■□□□ 1.47
LIMS2-207ENST00000409808 SPATA31A7Q8IWB4 1347 aa24.23■■□□□ 1.47
LIMS2-207ENST00000409808 HMMRO75330 724 aa24.22■■□□□ 1.47
LIMS2-207ENST00000409808 COPS6Q7L5N1 327 aa24.22■■□□□ 1.47
LIMS2-207ENST00000409808 USP26Q9BXU7 913 aa24.22■■□□□ 1.47
LIMS2-207ENST00000409808 NGLY1Q96IV0 654 aa24.22■■□□□ 1.47
LIMS2-207ENST00000409808 NWD2Q9ULI1 1742 aa24.21■■□□□ 1.47
LIMS2-207ENST00000409808 LRP10Q7Z4F1 713 aa24.21■■□□□ 1.47
LIMS2-207ENST00000409808 RBM42Q9BTD8 480 aaKnown RBP24.21■■□□□ 1.47
LIMS2-207ENST00000409808 NBPF7P0C2Y1 421 aaPredicted RBP24.2■■□□□ 1.46
LIMS2-207ENST00000409808 UBTFL1P0CB47 393 aaPredicted RBP24.2■■□□□ 1.46
LIMS2-207ENST00000409808 CWF19L2Q2TBE0 894 aaKnown RBP24.2■■□□□ 1.46
LIMS2-207ENST00000409808 RRAGDQ9NQL2 400 aaPredicted RBP24.2■■□□□ 1.46
LIMS2-207ENST00000409808 LAMB4A4D0S4 1761 aa24.2■■□□□ 1.46
LIMS2-207ENST00000409808 APBB1O00213 710 aa24.19■■□□□ 1.46
LIMS2-207ENST00000409808 SYTL4Q96C24 671 aaPredicted RBP24.19■■□□□ 1.46
LIMS2-207ENST00000409808 TNS2Q63HR2 1409 aa24.19■■□□□ 1.46
LIMS2-207ENST00000409808 NUCB2P80303 420 aa24.19■■□□□ 1.46
LIMS2-207ENST00000409808 THRAP3Q9Y2W1 955 aaKnown RBP24.19■■□□□ 1.46
LIMS2-207ENST00000409808 PNMA6EA0A0J9YXQ4 647 aa24.18■■□□□ 1.46
LIMS2-207ENST00000409808 DDB1Q16531 1140 aa24.18■■□□□ 1.46
LIMS2-207ENST00000409808 NBPF26B4DH59 902 aa24.18■■□□□ 1.46
LIMS2-207ENST00000409808 NBPF14Q5TI25 921 aa24.18■■□□□ 1.46
LIMS2-207ENST00000409808 NBPF10Q6P3W6 841 aaKnown RBP24.18■■□□□ 1.46
LIMS2-207ENST00000409808 RIC3Q7Z5B4 369 aa24.18■■□□□ 1.46
LIMS2-207ENST00000409808 UNC5CLQ8IV45 518 aa24.18■■□□□ 1.46
LIMS2-207ENST00000409808 C16orf71Q8IYS4 520 aaPredicted RBP24.18■■□□□ 1.46
LIMS2-207ENST00000409808 NBPF15Q8N660 670 aa24.18■■□□□ 1.46
LIMS2-207ENST00000409808 PANK2Q9BZ23 570 aa24.18■■□□□ 1.46
LIMS2-207ENST00000409808 ATG3Q9NT62 314 aa24.18■■□□□ 1.46
LIMS2-207ENST00000409808 DDX58O95786 925 aaKnown RBP24.17■■□□□ 1.46
LIMS2-207ENST00000409808 A1BGP04217 495 aa24.17■■□□□ 1.46
LIMS2-207ENST00000409808 CWC22Q9HCG8 908 aaKnown RBP24.17■■□□□ 1.46
LIMS2-207ENST00000409808 REC8O95072 547 aa24.17■■□□□ 1.46
LIMS2-207ENST00000409808 OSBPL3Q9H4L5 887 aa24.17■■□□□ 1.46
LIMS2-207ENST00000409808 SDSP20132 328 aa24.16■■□□□ 1.46
LIMS2-207ENST00000409808 ARXQ96QS3 562 aa24.16■■□□□ 1.46
LIMS2-207ENST00000409808 CDCA7Q9BWT1 371 aaPredicted RBP24.16■■□□□ 1.46
LIMS2-207ENST00000409808 LRP6O75581 1613 aa24.16■■□□□ 1.46
LIMS2-207ENST00000409808 BCL9LQ86UU0 1499 aa24.15■■□□□ 1.46
LIMS2-207ENST00000409808 HSPA1LP34931 641 aa24.15■■□□□ 1.46
LIMS2-207ENST00000409808 PRIM1P49642 420 aaKnown RBP24.15■■□□□ 1.46
LIMS2-207ENST00000409808 SMARCA5O60264 1052 aaPredicted RBP24.15■■□□□ 1.46
LIMS2-207ENST00000409808 ATP8B2P98198 1209 aa24.15■■□□□ 1.46
LIMS2-207ENST00000409808 IBTKQ9P2D0 1353 aaPredicted RBP24.14■■□□□ 1.46
LIMS2-207ENST00000409808 A0A0G2JS52 829 aa24.14■■□□□ 1.45
LIMS2-207ENST00000409808 ST18O60284 1047 aa24.14■■□□□ 1.45
LIMS2-207ENST00000409808 FAM98CQ17RN3 349 aaKnown RBP24.14■■□□□ 1.45
LIMS2-207ENST00000409808 MARCH10Q8NA82 808 aaPredicted RBP24.14■■□□□ 1.45
LIMS2-207ENST00000409808 FOXD4L1Q9NU39 408 aa24.14■■□□□ 1.45
LIMS2-207ENST00000409808 BCL9O00512 1426 aa24.14■■□□□ 1.45
LIMS2-207ENST00000409808 SSFA2P28290 1259 aa24.13■■□□□ 1.45
LIMS2-207ENST00000409808 CLCN1P35523 988 aa24.13■■□□□ 1.45
LIMS2-207ENST00000409808 ANKRD13DQ6ZTN6 518 aa24.13■■□□□ 1.45
LIMS2-207ENST00000409808 DOT1LQ8TEK3 1739 aa24.13■■□□□ 1.45
LIMS2-207ENST00000409808 IGKV5-2P06315 115 aa24.13■■□□□ 1.45
LIMS2-207ENST00000409808 ACSBG1Q96GR2 724 aa24.13■■□□□ 1.45
LIMS2-207ENST00000409808 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.13■■□□□ 1.45
LIMS2-207ENST00000409808 ALDH1L1O75891 902 aa24.12■■□□□ 1.45
LIMS2-207ENST00000409808 KLHL40Q2TBA0 621 aa24.12■■□□□ 1.45
LIMS2-207ENST00000409808 LINS1Q8NG48 757 aa24.12■■□□□ 1.45
LIMS2-207ENST00000409808 MYD88Q99836 296 aa24.12■■□□□ 1.45
LIMS2-207ENST00000409808 C9orf78Q9NZ63 289 aaPredicted RBP24.12■■□□□ 1.45
LIMS2-207ENST00000409808 EXOC6BQ9Y2D4 811 aa24.12■■□□□ 1.45
LIMS2-207ENST00000409808 BAG4O95429 457 aaKnown RBP24.12■■□□□ 1.45
LIMS2-207ENST00000409808 BARGINQ6ZT62 677 aa24.12■■□□□ 1.45
LIMS2-207ENST00000409808 DNAJC10Q8IXB1 793 aa24.11■■□□□ 1.45
LIMS2-207ENST00000409808 ERC2O15083 957 aa24.11■■□□□ 1.45
LIMS2-207ENST00000409808 OTUD7AQ8TE49 926 aaPredicted RBP24.11■■□□□ 1.45
LIMS2-207ENST00000409808 TTLL7Q6ZT98 887 aa24.1■■□□□ 1.45
LIMS2-207ENST00000409808 PPP1R42Q7Z4L9 355 aa24.1■■□□□ 1.45
LIMS2-207ENST00000409808 METTL22Q9BUU2 404 aaPredicted RBP24.1■■□□□ 1.45
LIMS2-207ENST00000409808 SLC4A9Q96Q91 983 aa24.1■■□□□ 1.45
LIMS2-207ENST00000409808 SPATA31A6Q5VVP1 1343 aa24.09■■□□□ 1.45
LIMS2-207ENST00000409808 VPS72Q15906 364 aa24.09■■□□□ 1.45
LIMS2-207ENST00000409808 FNBP4Q8N3X1 1017 aaPredicted RBP24.09■■□□□ 1.45
LIMS2-207ENST00000409808 CYP2E1P05181 493 aaPredicted RBP24.09■■□□□ 1.45
LIMS2-207ENST00000409808 ARFGEF2Q9Y6D5 1785 aa24.08■■□□□ 1.45
LIMS2-207ENST00000409808 USP21Q9UK80 565 aa24.08■■□□□ 1.45
LIMS2-207ENST00000409808 NEURL1BA8MQ27 555 aa24.07■■□□□ 1.44
LIMS2-207ENST00000409808 NEXNQ0ZGT2 675 aa24.07■■□□□ 1.44
LIMS2-207ENST00000409808 ERBB4Q15303 1308 aa24.07■■□□□ 1.44
LIMS2-207ENST00000409808 ATP5J2-PTCD1G3V325 749 aa24.07■■□□□ 1.44
LIMS2-207ENST00000409808 GAS2L3Q86XJ1 694 aa24.07■■□□□ 1.44
LIMS2-207ENST00000409808 JARID2Q92833 1246 aaPredicted RBP24.07■■□□□ 1.44
LIMS2-207ENST00000409808 GRM8O00222 908 aa24.06■■□□□ 1.44
LIMS2-207ENST00000409808 PDE1AP54750 535 aa24.06■■□□□ 1.44
LIMS2-207ENST00000409808 ZNF330Q9Y3S2 320 aaPredicted RBP24.06■■□□□ 1.44
LIMS2-207ENST00000409808 SRGAP3O43295 1099 aa24.06■■□□□ 1.44
LIMS2-207ENST00000409808 DDX49Q9Y6V7 483 aaKnown RBP24.06■■□□□ 1.44
LIMS2-207ENST00000409808 PLBD2Q8NHP8 589 aa24.05■■□□□ 1.44
LIMS2-207ENST00000409808 SSH3Q8TE77 659 aa24.05■■□□□ 1.44
LIMS2-207ENST00000409808 MEX3CQ5U5Q3 659 aaKnown RBP24.05■■□□□ 1.44
LIMS2-207ENST00000409808 SUCLG2Q96I99 432 aa24.05■■□□□ 1.44
LIMS2-207ENST00000409808 GCKRQ14397 625 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms