RNA–Protein interactions for RNA: ENST00000409422.5

ATG9A-204, Transcript of autophagy related 9A, humanhuman

TSL 5 BASIC

Gene ATG9A, Length 2,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-204ENST00000409422 TMX3Q96JJ7 454 aa17.35■□□□□ 0.37
ATG9A-204ENST00000409422 TRIM6-TRIM34B2RNG4 842 aa17.35■□□□□ 0.37
ATG9A-204ENST00000409422 UBTFL1P0CB47 393 aaPredicted RBP17.35■□□□□ 0.37
ATG9A-204ENST00000409422 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
ATG9A-204ENST00000409422 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
ATG9A-204ENST00000409422 PXDNLA1KZ92 1463 aa17.34■□□□□ 0.37
ATG9A-204ENST00000409422 TNS2Q63HR2 1409 aa17.34■□□□□ 0.37
ATG9A-204ENST00000409422 TOGARAM1Q9Y4F4 1720 aa17.34■□□□□ 0.37
ATG9A-204ENST00000409422 EIF2S2P20042 333 aaKnown RBP17.34■□□□□ 0.37
ATG9A-204ENST00000409422 CLCN1P35523 988 aa17.34■□□□□ 0.37
ATG9A-204ENST00000409422 EIF4A1P60842 406 aaKnown RBP17.34■□□□□ 0.37
ATG9A-204ENST00000409422 PPP1R42Q7Z4L9 355 aa17.34■□□□□ 0.37
ATG9A-204ENST00000409422 NBPF7P0C2Y1 421 aaPredicted RBP17.33■□□□□ 0.36
ATG9A-204ENST00000409422 BARGINQ6ZT62 677 aa17.33■□□□□ 0.36
ATG9A-204ENST00000409422 NUTM1Q86Y26 1132 aa17.33■□□□□ 0.36
ATG9A-204ENST00000409422 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
ATG9A-204ENST00000409422 AMOTQ4VCS5 1084 aa17.32■□□□□ 0.36
ATG9A-204ENST00000409422 ILDR1Q86SU0 546 aaPredicted RBP17.32■□□□□ 0.36
ATG9A-204ENST00000409422 ANO2Q9NQ90 1003 aa17.32■□□□□ 0.36
ATG9A-204ENST00000409422 POLA2Q14181 598 aa17.32■□□□□ 0.36
ATG9A-204ENST00000409422 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
ATG9A-204ENST00000409422 GPT2Q8TD30 523 aa17.32■□□□□ 0.36
ATG9A-204ENST00000409422 UBE2Q2Q8WVN8 375 aa17.32■□□□□ 0.36
ATG9A-204ENST00000409422 CAVIN1Q6NZI2 390 aaKnown RBP17.31■□□□□ 0.36
ATG9A-204ENST00000409422 CHPF2Q9P2E5 772 aa17.31■□□□□ 0.36
ATG9A-204ENST00000409422 PRPF40AO75400 957 aaKnown RBP17.31■□□□□ 0.36
ATG9A-204ENST00000409422 ANXA1P04083 346 aa17.31■□□□□ 0.36
ATG9A-204ENST00000409422 TRPC5Q9UL62 973 aaPredicted RBP17.31■□□□□ 0.36
ATG9A-204ENST00000409422 SRCIN1Q9C0H9 1055 aa17.3■□□□□ 0.36
ATG9A-204ENST00000409422 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
ATG9A-204ENST00000409422 BRWD3Q6RI45 1802 aa17.3■□□□□ 0.36
ATG9A-204ENST00000409422 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
ATG9A-204ENST00000409422 MAP4K4O95819 1239 aaPredicted RBP17.3■□□□□ 0.36
ATG9A-204ENST00000409422 ZSCAN23Q3MJ62 389 aa17.3■□□□□ 0.36
ATG9A-204ENST00000409422 BEND3Q5T5X7 828 aa17.3■□□□□ 0.36
ATG9A-204ENST00000409422 FOXD4L5Q5VV16 416 aaPredicted RBP17.3■□□□□ 0.36
ATG9A-204ENST00000409422 ZNF530Q6P9A1 599 aaPredicted RBP17.3■□□□□ 0.36
ATG9A-204ENST00000409422 PI4K2BQ8TCG2 481 aa17.3■□□□□ 0.36
ATG9A-204ENST00000409422 FOXD4L4Q8WXT5 416 aaPredicted RBP17.3■□□□□ 0.36
ATG9A-204ENST00000409422 KDM6AO15550 1401 aaPredicted RBP17.29■□□□□ 0.36
ATG9A-204ENST00000409422 PI4KAP2A4QPH2 592 aa17.29■□□□□ 0.36
ATG9A-204ENST00000409422 CYP27B1O15528 508 aa17.29■□□□□ 0.36
ATG9A-204ENST00000409422 ZNF445P59923 1031 aa17.29■□□□□ 0.36
ATG9A-204ENST00000409422 CUL4AQ13619 759 aa17.29■□□□□ 0.36
ATG9A-204ENST00000409422 PI4KAP1Q8N8J0 262 aa17.29■□□□□ 0.36
ATG9A-204ENST00000409422 IL17RAQ96F46 866 aa17.29■□□□□ 0.36
ATG9A-204ENST00000409422 GJD4Q96KN9 370 aaPredicted RBP17.29■□□□□ 0.36
ATG9A-204ENST00000409422 NSFL1CQ9UNZ2 370 aaKnown RBP17.29■□□□□ 0.36
ATG9A-204ENST00000409422 ESPNB1AK53 854 aa17.29■□□□□ 0.36
ATG9A-204ENST00000409422 NCLP19338 710 aaKnown RBP17.29■□□□□ 0.36
ATG9A-204ENST00000409422 RHPN1Q8TCX5 695 aa17.29■□□□□ 0.36
ATG9A-204ENST00000409422 UPF3BQ9BZI7 483 aaKnown RBP17.29■□□□□ 0.36
ATG9A-204ENST00000409422 SPG7Q9UQ90 795 aa17.29■□□□□ 0.36
ATG9A-204ENST00000409422 MRC1P22897 1456 aa17.28■□□□□ 0.36
ATG9A-204ENST00000409422 ANAPC15P60006 121 aa17.28■□□□□ 0.36
ATG9A-204ENST00000409422 NOL8Q76FK4 1167 aaKnown RBP17.28■□□□□ 0.36
ATG9A-204ENST00000409422 CDCA7Q9BWT1 371 aaPredicted RBP17.28■□□□□ 0.36
ATG9A-204ENST00000409422 RBM27Q9P2N5 1060 aaKnown RBP17.28■□□□□ 0.36
ATG9A-204ENST00000409422 DOT1LQ8TEK3 1739 aa17.28■□□□□ 0.36
ATG9A-204ENST00000409422 SRGAP3O43295 1099 aa17.28■□□□□ 0.36
ATG9A-204ENST00000409422 NASPP49321 788 aaPredicted RBP17.28■□□□□ 0.36
ATG9A-204ENST00000409422 FAM98CQ17RN3 349 aaKnown RBP17.28■□□□□ 0.36
ATG9A-204ENST00000409422 ZCRB1Q8TBF4 217 aaKnown RBP17.28■□□□□ 0.36
ATG9A-204ENST00000409422 ITGB4P16144 1822 aa17.28■□□□□ 0.36
ATG9A-204ENST00000409422 AOX1Q06278 1338 aa17.28■□□□□ 0.36
ATG9A-204ENST00000409422 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
ATG9A-204ENST00000409422 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
ATG9A-204ENST00000409422 KDM3BQ7LBC6 1761 aa17.28■□□□□ 0.36
ATG9A-204ENST00000409422 PHKG2P15735 406 aa17.27■□□□□ 0.36
ATG9A-204ENST00000409422 AKAP4Q5JQC9 854 aa17.27■□□□□ 0.36
ATG9A-204ENST00000409422 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
ATG9A-204ENST00000409422 RGS17Q9UGC6 210 aaPredicted RBP17.27■□□□□ 0.36
ATG9A-204ENST00000409422 DNAAF4Q8WXU2 420 aa17.27■□□□□ 0.36
ATG9A-204ENST00000409422 QTRT2Q9H974 415 aaKnown RBP17.27■□□□□ 0.36
ATG9A-204ENST00000409422 BRD1O95696 1058 aa17.26■□□□□ 0.35
ATG9A-204ENST00000409422 ADCY9O60503 1353 aa17.26■□□□□ 0.35
ATG9A-204ENST00000409422 RAB11FIP3O75154 756 aa17.26■□□□□ 0.35
ATG9A-204ENST00000409422 ZNF772Q68DY9 489 aaPredicted RBP17.26■□□□□ 0.35
ATG9A-204ENST00000409422 PPP1R9BQ96SB3 815 aa17.26■□□□□ 0.35
ATG9A-204ENST00000409422 MCCP23508 829 aa17.25■□□□□ 0.35
ATG9A-204ENST00000409422 MCM2P49736 904 aa17.25■□□□□ 0.35
ATG9A-204ENST00000409422 HSPA4P34932 840 aa17.25■□□□□ 0.35
ATG9A-204ENST00000409422 PRIM1P49642 420 aaKnown RBP17.25■□□□□ 0.35
ATG9A-204ENST00000409422 RBSNQ9H1K0 784 aa17.25■□□□□ 0.35
ATG9A-204ENST00000409422 TMEM63CQ9P1W3 806 aa17.25■□□□□ 0.35
ATG9A-204ENST00000409422 BTBD11A6QL63 1104 aa17.24■□□□□ 0.35
ATG9A-204ENST00000409422 ONECUT3O60422 494 aaPredicted RBP17.24■□□□□ 0.35
ATG9A-204ENST00000409422 HOXB7P09629 217 aa17.24■□□□□ 0.35
ATG9A-204ENST00000409422 C1orf141Q5JVX7 400 aa17.24■□□□□ 0.35
ATG9A-204ENST00000409422 IFNL2Q8IZJ0 200 aa17.24■□□□□ 0.35
ATG9A-204ENST00000409422 PROSER3Q2NL68 480 aa17.24■□□□□ 0.35
ATG9A-204ENST00000409422 PAPPAQ13219 1627 aa17.24■□□□□ 0.35
ATG9A-204ENST00000409422 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
ATG9A-204ENST00000409422 KIF1BPQ96EK5 621 aa17.23■□□□□ 0.35
ATG9A-204ENST00000409422 INTS4Q96HW7 963 aaKnown RBP17.23■□□□□ 0.35
ATG9A-204ENST00000409422 SBF2Q86WG5 1849 aa17.23■□□□□ 0.35
ATG9A-204ENST00000409422 SGSM2O43147 1006 aa17.23■□□□□ 0.35
ATG9A-204ENST00000409422 NKX1-1Q15270 411 aaPredicted RBP17.23■□□□□ 0.35
ATG9A-204ENST00000409422 TRIM44Q96DX7 344 aaPredicted RBP17.23■□□□□ 0.35
ATG9A-204ENST00000409422 CCDC173Q0VFZ6 552 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms