RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 NUP188Q5SRE5 1749 aa19.37■□□□□ 0.69
AP1S3-204ENST00000409375 PXDNLA1KZ92 1463 aa19.37■□□□□ 0.69
AP1S3-204ENST00000409375 PI4KAP2A4QPH2 592 aa19.37■□□□□ 0.69
AP1S3-204ENST00000409375 PLIN1O60240 522 aa19.37■□□□□ 0.69
AP1S3-204ENST00000409375 TRAPPC3LQ5T215 181 aa19.37■□□□□ 0.69
AP1S3-204ENST00000409375 ILDR2Q71H61 639 aa19.37■□□□□ 0.69
AP1S3-204ENST00000409375 PI4KAP1Q8N8J0 262 aa19.37■□□□□ 0.69
AP1S3-204ENST00000409375 DNAAF4Q8WXU2 420 aa19.37■□□□□ 0.69
AP1S3-204ENST00000409375 ZNF652Q9Y2D9 606 aa19.37■□□□□ 0.69
AP1S3-204ENST00000409375 MAP3K15Q6ZN16 1313 aa19.36■□□□□ 0.69
AP1S3-204ENST00000409375 ERVV-1B6SEH8 477 aa19.36■□□□□ 0.69
AP1S3-204ENST00000409375 RGL2O15211 777 aa19.36■□□□□ 0.69
AP1S3-204ENST00000409375 HSP90AB3PQ58FF7 597 aa19.36■□□□□ 0.69
AP1S3-204ENST00000409375 TTLL7Q6ZT98 887 aa19.36■□□□□ 0.69
AP1S3-204ENST00000409375 AKT1S1Q96B36 256 aa19.36■□□□□ 0.69
AP1S3-204ENST00000409375 MAP3K2Q9Y2U5 619 aa19.36■□□□□ 0.69
AP1S3-204ENST00000409375 ZPR1O75312 459 aa19.35■□□□□ 0.69
AP1S3-204ENST00000409375 RFC4P35249 363 aa19.35■□□□□ 0.69
AP1S3-204ENST00000409375 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
AP1S3-204ENST00000409375 CLUAP1Q96AJ1 413 aa19.35■□□□□ 0.69
AP1S3-204ENST00000409375 CHMP4BQ9H444 224 aaKnown RBP19.35■□□□□ 0.69
AP1S3-204ENST00000409375 ARFGEF2Q9Y6D5 1785 aa19.34■□□□□ 0.69
AP1S3-204ENST00000409375 ABCC4O15439 1325 aa19.34■□□□□ 0.69
AP1S3-204ENST00000409375 PHF14O94880 888 aa19.34■□□□□ 0.69
AP1S3-204ENST00000409375 SLC4A10Q6U841 1118 aa19.34■□□□□ 0.69
AP1S3-204ENST00000409375 ZBTB3Q9H5J0 574 aa19.34■□□□□ 0.69
AP1S3-204ENST00000409375 TBC1D2BQ9UPU7 963 aa19.34■□□□□ 0.69
AP1S3-204ENST00000409375 ADCY9O60503 1353 aa19.33■□□□□ 0.69
AP1S3-204ENST00000409375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.33■□□□□ 0.68
AP1S3-204ENST00000409375 SLC15A2Q16348 729 aa19.33■□□□□ 0.68
AP1S3-204ENST00000409375 METTL22Q9BUU2 404 aaPredicted RBP19.33■□□□□ 0.68
AP1S3-204ENST00000409375 NARFQ9UHQ1 456 aa19.33■□□□□ 0.68
AP1S3-204ENST00000409375 QSER1Q2KHR3 1735 aa19.32■□□□□ 0.68
AP1S3-204ENST00000409375 F6X3S4 739 aa19.32■□□□□ 0.68
AP1S3-204ENST00000409375 ZNF827Q17R98 1081 aa19.32■□□□□ 0.68
AP1S3-204ENST00000409375 CLEC4GQ6UXB4 293 aa19.32■□□□□ 0.68
AP1S3-204ENST00000409375 GIGYF2Q6Y7W6 1299 aaKnown RBP19.32■□□□□ 0.68
AP1S3-204ENST00000409375 ARHGEF1Q92888 912 aaKnown RBP19.32■□□□□ 0.68
AP1S3-204ENST00000409375 SRCIN1Q9C0H9 1055 aa19.32■□□□□ 0.68
AP1S3-204ENST00000409375 ATP10DQ9P241 1426 aa19.32■□□□□ 0.68
AP1S3-204ENST00000409375 BCORQ6W2J9 1755 aa19.32■□□□□ 0.68
AP1S3-204ENST00000409375 C4AP0C0L4 1744 aa19.31■□□□□ 0.68
AP1S3-204ENST00000409375 SCN7AQ01118 1682 aa19.31■□□□□ 0.68
AP1S3-204ENST00000409375 INTS3Q68E01 1043 aaKnown RBP19.31■□□□□ 0.68
AP1S3-204ENST00000409375 LINS1Q8NG48 757 aa19.31■□□□□ 0.68
AP1S3-204ENST00000409375 ALDH1L1O75891 902 aa19.3■□□□□ 0.68
AP1S3-204ENST00000409375 CAMTA2O94983 1202 aa19.3■□□□□ 0.68
AP1S3-204ENST00000409375 ITPRIPQ8IWB1 547 aa19.3■□□□□ 0.68
AP1S3-204ENST00000409375 PANK1Q8TE04 598 aa19.3■□□□□ 0.68
AP1S3-204ENST00000409375 DDX19BQ9UMR2 479 aa19.3■□□□□ 0.68
AP1S3-204ENST00000409375 NUP98P52948 1817 aa19.3■□□□□ 0.68
AP1S3-204ENST00000409375 USP42Q9H9J4 1324 aaKnown RBP19.29■□□□□ 0.68
AP1S3-204ENST00000409375 MSH5O43196 834 aa19.29■□□□□ 0.68
AP1S3-204ENST00000409375 TCIRG1Q13488 830 aa19.29■□□□□ 0.68
AP1S3-204ENST00000409375 TMEM57Q8N5G2 664 aa19.29■□□□□ 0.68
AP1S3-204ENST00000409375 MYD88Q99836 296 aa19.29■□□□□ 0.68
AP1S3-204ENST00000409375 ANO8Q9HCE9 1232 aaPredicted RBP19.29■□□□□ 0.68
AP1S3-204ENST00000409375 TUBGCP6Q96RT7 1819 aa19.29■□□□□ 0.68
AP1S3-204ENST00000409375 ANKRD36CQ5JPF3 1778 aa19.29■□□□□ 0.68
AP1S3-204ENST00000409375 MVPQ14764 893 aaKnown RBP19.28■□□□□ 0.68
AP1S3-204ENST00000409375 BEND3Q5T5X7 828 aa19.28■□□□□ 0.68
AP1S3-204ENST00000409375 IBTKQ9P2D0 1353 aaPredicted RBP19.28■□□□□ 0.68
AP1S3-204ENST00000409375 RLBP1P12271 317 aa19.27■□□□□ 0.68
AP1S3-204ENST00000409375 PARP10Q53GL7 1025 aa19.27■□□□□ 0.68
AP1S3-204ENST00000409375 C20orf194Q5TEA3 1177 aa19.27■□□□□ 0.68
AP1S3-204ENST00000409375 USPL1Q5W0Q7 1092 aa19.27■□□□□ 0.68
AP1S3-204ENST00000409375 HDAC5Q9UQL6 1122 aa19.27■□□□□ 0.68
AP1S3-204ENST00000409375 TNNQ9UQP3 1299 aa19.27■□□□□ 0.68
AP1S3-204ENST00000409375 COG6Q9Y2V7 657 aa19.27■□□□□ 0.68
AP1S3-204ENST00000409375 PNPLA7Q6ZV29 1317 aa19.26■□□□□ 0.67
AP1S3-204ENST00000409375 AFDNP55196 1824 aaKnown RBP19.26■□□□□ 0.67
AP1S3-204ENST00000409375 TRIM28Q13263 835 aaKnown RBP19.26■□□□□ 0.67
AP1S3-204ENST00000409375 AAMPQ13685 434 aa19.26■□□□□ 0.67
AP1S3-204ENST00000409375 HLFQ16534 295 aa19.26■□□□□ 0.67
AP1S3-204ENST00000409375 CCDC191Q8NCU4 936 aa19.26■□□□□ 0.67
AP1S3-204ENST00000409375 AMIGO3Q86WK7 504 aa19.25■□□□□ 0.67
AP1S3-204ENST00000409375 CWC25Q9NXE8 425 aaPredicted RBP19.25■□□□□ 0.67
AP1S3-204ENST00000409375 C9orf78Q9NZ63 289 aaPredicted RBP19.25■□□□□ 0.67
AP1S3-204ENST00000409375 SRP68Q9UHB9 627 aaKnown RBP19.25■□□□□ 0.67
AP1S3-204ENST00000409375 NEURL1BA8MQ27 555 aa19.24■□□□□ 0.67
AP1S3-204ENST00000409375 GNAI3P08754 354 aa19.24■□□□□ 0.67
AP1S3-204ENST00000409375 SMIM5Q71RC9 77 aa19.24■□□□□ 0.67
AP1S3-204ENST00000409375 COL23A1Q86Y22 540 aaPredicted RBP19.24■□□□□ 0.67
AP1S3-204ENST00000409375 NLGN1Q8N2Q7 840 aa19.24■□□□□ 0.67
AP1S3-204ENST00000409375 ISCA1Q9BUE6 129 aa19.24■□□□□ 0.67
AP1S3-204ENST00000409375 ATP5J2-PTCD1G3V325 749 aa19.23■□□□□ 0.67
AP1S3-204ENST00000409375 IGKV5-2P06315 115 aa19.23■□□□□ 0.67
AP1S3-204ENST00000409375 CWF19L2Q2TBE0 894 aaKnown RBP19.23■□□□□ 0.67
AP1S3-204ENST00000409375 ZNF34Q8IZ26 560 aa19.23■□□□□ 0.67
AP1S3-204ENST00000409375 SLC16A10Q8TF71 515 aa19.23■□□□□ 0.67
AP1S3-204ENST00000409375 CRBNQ96SW2 442 aa19.23■□□□□ 0.67
AP1S3-204ENST00000409375 NIP7Q9Y221 180 aaKnown RBP eCLIP19.23■□□□□ 0.67
AP1S3-204ENST00000409375 GYS1P13807 737 aa19.22■□□□□ 0.67
AP1S3-204ENST00000409375 GPTP24298 496 aa19.22■□□□□ 0.67
AP1S3-204ENST00000409375 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
AP1S3-204ENST00000409375 GCKRQ14397 625 aa19.22■□□□□ 0.67
AP1S3-204ENST00000409375 ERICH6BQ5W0A0 696 aa19.22■□□□□ 0.67
AP1S3-204ENST00000409375 PPP1R42Q7Z4L9 355 aa19.22■□□□□ 0.67
AP1S3-204ENST00000409375 SETDB2Q96T68 719 aa19.22■□□□□ 0.67
AP1S3-204ENST00000409375 GRM8O00222 908 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms