RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 ANO8Q9HCE9 1232 aaPredicted RBP26.07■■□□□ 1.76
VSX1-203ENST00000409285 SLC15A2Q16348 729 aa26.06■■□□□ 1.76
VSX1-203ENST00000409285 KSR2Q6VAB6 950 aa26.06■■□□□ 1.76
VSX1-203ENST00000409285 KIF6Q6ZMV9 814 aa26.06■■□□□ 1.76
VSX1-203ENST00000409285 TTLL7Q6ZT98 887 aa26.06■■□□□ 1.76
VSX1-203ENST00000409285 ANKRD13DQ6ZTN6 518 aa26.06■■□□□ 1.76
VSX1-203ENST00000409285 ZNF330Q9Y3S2 320 aaPredicted RBP26.06■■□□□ 1.76
VSX1-203ENST00000409285 ABCC4O15439 1325 aa26.06■■□□□ 1.76
VSX1-203ENST00000409285 MAP3K15Q6ZN16 1313 aa26.06■■□□□ 1.76
VSX1-203ENST00000409285 ATP10DQ9P241 1426 aa26.06■■□□□ 1.76
VSX1-203ENST00000409285 COL24A1Q17RW2 1714 aa26.05■■□□□ 1.76
VSX1-203ENST00000409285 CASZ1Q86V15 1759 aa26.05■■□□□ 1.76
VSX1-203ENST00000409285 ERVV-1B6SEH8 477 aa26.05■■□□□ 1.76
VSX1-203ENST00000409285 AIMP1Q12904 312 aaKnown RBP26.05■■□□□ 1.76
VSX1-203ENST00000409285 DZIP3Q86Y13 1208 aaKnown RBP26.05■■□□□ 1.76
VSX1-203ENST00000409285 FLAD1Q8NFF5 587 aa26.05■■□□□ 1.76
VSX1-203ENST00000409285 STK32BQ9NY57 414 aa26.05■■□□□ 1.76
VSX1-203ENST00000409285 SUPT16HQ9Y5B9 1047 aaKnown RBP26.05■■□□□ 1.76
VSX1-203ENST00000409285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.04■■□□□ 1.76
VSX1-203ENST00000409285 TRAPPC3LQ5T215 181 aa26.04■■□□□ 1.76
VSX1-203ENST00000409285 TFCP2L1Q9NZI6 479 aa26.04■■□□□ 1.76
VSX1-203ENST00000409285 PI4KAP2A4QPH2 592 aa26.04■■□□□ 1.76
VSX1-203ENST00000409285 MS4A1P11836 297 aa26.04■■□□□ 1.76
VSX1-203ENST00000409285 PI4KAP1Q8N8J0 262 aa26.04■■□□□ 1.76
VSX1-203ENST00000409285 NARFQ9UHQ1 456 aa26.04■■□□□ 1.76
VSX1-203ENST00000409285 IBTKQ9P2D0 1353 aaPredicted RBP26.03■■□□□ 1.76
VSX1-203ENST00000409285 PDE3AQ14432 1141 aa26.03■■□□□ 1.76
VSX1-203ENST00000409285 R3HDM1Q15032 1099 aaKnown RBP26.03■■□□□ 1.76
VSX1-203ENST00000409285 ARHGEF1Q92888 912 aaKnown RBP26.03■■□□□ 1.76
VSX1-203ENST00000409285 USP42Q9H9J4 1324 aaKnown RBP26.03■■□□□ 1.76
VSX1-203ENST00000409285 CAMTA2O94983 1202 aa26.02■■□□□ 1.76
VSX1-203ENST00000409285 DNAAF4Q8WXU2 420 aa26.02■■□□□ 1.76
VSX1-203ENST00000409285 PSDA5PKW4 1024 aaPredicted RBP26.01■■□□□ 1.75
VSX1-203ENST00000409285 PLIN1O60240 522 aa26.01■■□□□ 1.75
VSX1-203ENST00000409285 PNPLA7Q6ZV29 1317 aa26.01■■□□□ 1.75
VSX1-203ENST00000409285 TBC1D2BQ9UPU7 963 aa26.01■■□□□ 1.75
VSX1-203ENST00000409285 MAP3K2Q9Y2U5 619 aa26.01■■□□□ 1.75
VSX1-203ENST00000409285 CLEC4GQ6UXB4 293 aa26■■□□□ 1.75
VSX1-203ENST00000409285 RIC3Q7Z5B4 369 aa26■■□□□ 1.75
VSX1-203ENST00000409285 PHF14O94880 888 aa25.99■■□□□ 1.75
VSX1-203ENST00000409285 RFC4P35249 363 aa25.99■■□□□ 1.75
VSX1-203ENST00000409285 GIGYF2Q6Y7W6 1299 aaKnown RBP25.99■■□□□ 1.75
VSX1-203ENST00000409285 DZIP1LQ8IYY4 767 aaKnown RBP25.99■■□□□ 1.75
VSX1-203ENST00000409285 METTL22Q9BUU2 404 aaPredicted RBP25.99■■□□□ 1.75
VSX1-203ENST00000409285 ZBTB3Q9H5J0 574 aa25.99■■□□□ 1.75
VSX1-203ENST00000409285 F6X3S4 739 aa25.98■■□□□ 1.75
VSX1-203ENST00000409285 ZNF652Q9Y2D9 606 aa25.98■■□□□ 1.75
VSX1-203ENST00000409285 HSP90AB3PQ58FF7 597 aa25.98■■□□□ 1.75
VSX1-203ENST00000409285 FTSJ3Q8IY81 847 aaKnown RBP25.98■■□□□ 1.75
VSX1-203ENST00000409285 ZPR1O75312 459 aa25.97■■□□□ 1.75
VSX1-203ENST00000409285 INTS3Q68E01 1043 aaKnown RBP25.97■■□□□ 1.75
VSX1-203ENST00000409285 SMIM5Q71RC9 77 aa25.97■■□□□ 1.75
VSX1-203ENST00000409285 TNNQ9UQP3 1299 aa25.97■■□□□ 1.75
VSX1-203ENST00000409285 LAMB2P55268 1798 aa25.96■■□□□ 1.75
VSX1-203ENST00000409285 COL23A1Q86Y22 540 aaPredicted RBP25.96■■□□□ 1.75
VSX1-203ENST00000409285 RLBP1P12271 317 aa25.95■■□□□ 1.74
VSX1-203ENST00000409285 CCT4P50991 539 aaKnown RBP25.95■■□□□ 1.74
VSX1-203ENST00000409285 NEXNQ0ZGT2 675 aa25.95■■□□□ 1.74
VSX1-203ENST00000409285 TCIRG1Q13488 830 aa25.95■■□□□ 1.74
VSX1-203ENST00000409285 HLFQ16534 295 aa25.95■■□□□ 1.74
VSX1-203ENST00000409285 BEND3Q5T5X7 828 aa25.95■■□□□ 1.74
VSX1-203ENST00000409285 LINS1Q8NG48 757 aa25.95■■□□□ 1.74
VSX1-203ENST00000409285 CLUAP1Q96AJ1 413 aa25.95■■□□□ 1.74
VSX1-203ENST00000409285 ARXQ96QS3 562 aa25.95■■□□□ 1.74
VSX1-203ENST00000409285 BCL2L12Q9HB09 334 aa25.95■■□□□ 1.74
VSX1-203ENST00000409285 MYH3P11055 1940 aa25.94■■□□□ 1.74
VSX1-203ENST00000409285 TRIM28Q13263 835 aaKnown RBP25.94■■□□□ 1.74
VSX1-203ENST00000409285 USPL1Q5W0Q7 1092 aa25.94■■□□□ 1.74
VSX1-203ENST00000409285 NRXN2Q9P2S2 1712 aa25.93■■□□□ 1.74
VSX1-203ENST00000409285 C20orf194Q5TEA3 1177 aa25.93■■□□□ 1.74
VSX1-203ENST00000409285 SRP68Q9UHB9 627 aaKnown RBP25.93■■□□□ 1.74
VSX1-203ENST00000409285 ALDH1L1O75891 902 aa25.92■■□□□ 1.74
VSX1-203ENST00000409285 SLC4A10Q6U841 1118 aa25.92■■□□□ 1.74
VSX1-203ENST00000409285 PANK1Q8TE04 598 aa25.92■■□□□ 1.74
VSX1-203ENST00000409285 ISCA1Q9BUE6 129 aa25.92■■□□□ 1.74
VSX1-203ENST00000409285 IGKV5-2P06315 115 aa25.91■■□□□ 1.74
VSX1-203ENST00000409285 GYS1P13807 737 aa25.91■■□□□ 1.74
VSX1-203ENST00000409285 ZNF34Q8IZ26 560 aa25.91■■□□□ 1.74
VSX1-203ENST00000409285 TMEM57Q8N5G2 664 aa25.91■■□□□ 1.74
VSX1-203ENST00000409285 MYD88Q99836 296 aa25.91■■□□□ 1.74
VSX1-203ENST00000409285 SRCIN1Q9C0H9 1055 aa25.91■■□□□ 1.74
VSX1-203ENST00000409285 MVPQ14764 893 aaKnown RBP25.9■■□□□ 1.74
VSX1-203ENST00000409285 NEURL1BA8MQ27 555 aa25.89■■□□□ 1.73
VSX1-203ENST00000409285 CCDC191Q8NCU4 936 aa25.89■■□□□ 1.73
VSX1-203ENST00000409285 DDX60Q8IY21 1712 aaKnown RBP25.89■■□□□ 1.73
VSX1-203ENST00000409285 SLC16A10Q8TF71 515 aa25.88■■□□□ 1.73
VSX1-203ENST00000409285 CWF19L2Q2TBE0 894 aaKnown RBP25.87■■□□□ 1.73
VSX1-203ENST00000409285 PARP10Q53GL7 1025 aa25.87■■□□□ 1.73
VSX1-203ENST00000409285 UBN2Q6ZU65 1347 aa25.87■■□□□ 1.73
VSX1-203ENST00000409285 FKBP8Q14318 412 aa25.86■■□□□ 1.73
VSX1-203ENST00000409285 NLGN1Q8N2Q7 840 aa25.86■■□□□ 1.73
VSX1-203ENST00000409285 DDX19BQ9UMR2 479 aa25.86■■□□□ 1.73
VSX1-203ENST00000409285 ATP5J2-PTCD1G3V325 749 aa25.85■■□□□ 1.73
VSX1-203ENST00000409285 GCKRQ14397 625 aa25.85■■□□□ 1.73
VSX1-203ENST00000409285 TBC1D9BQ66K14 1250 aa25.85■■□□□ 1.73
VSX1-203ENST00000409285 NLRP10Q86W26 655 aa25.85■■□□□ 1.73
VSX1-203ENST00000409285 ITPRIPQ8IWB1 547 aa25.85■■□□□ 1.73
VSX1-203ENST00000409285 CWC25Q9NXE8 425 aaPredicted RBP25.85■■□□□ 1.73
VSX1-203ENST00000409285 CARMIL3Q8ND23 1372 aa25.85■■□□□ 1.73
VSX1-203ENST00000409285 NIP7Q9Y221 180 aaKnown RBP eCLIP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms