RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 NMRK2Q9NPI5 230 aa29.68■■■□□ 2.34
KDELR3-202ENST00000409006 TMPOP42166 694 aaKnown RBP29.67■■■□□ 2.34
KDELR3-202ENST00000409006 CCDC146Q8IYE0 955 aa29.67■■■□□ 2.34
KDELR3-202ENST00000409006 FER1L6Q2WGJ9 1857 aa29.67■■■□□ 2.34
KDELR3-202ENST00000409006 NGEFQ8N5V2 710 aa29.66■■■□□ 2.34
KDELR3-202ENST00000409006 ZNF652Q9Y2D9 606 aa29.66■■■□□ 2.34
KDELR3-202ENST00000409006 ARFGEF2Q9Y6D5 1785 aa29.66■■■□□ 2.34
KDELR3-202ENST00000409006 RRP7AQ9Y3A4 280 aaKnown RBP29.65■■■□□ 2.34
KDELR3-202ENST00000409006 NPHP1O15259 732 aa29.64■■■□□ 2.34
KDELR3-202ENST00000409006 ST5P78524 1137 aa29.64■■■□□ 2.34
KDELR3-202ENST00000409006 NBPF5PQ86XG9 351 aaPredicted RBP29.64■■■□□ 2.34
KDELR3-202ENST00000409006 PDZRN3Q9UPQ7 1066 aa29.64■■■□□ 2.34
KDELR3-202ENST00000409006 NIP7Q9Y221 180 aaKnown RBP eCLIP29.64■■■□□ 2.34
KDELR3-202ENST00000409006 TIAM2Q8IVF5 1701 aa29.63■■■□□ 2.33
KDELR3-202ENST00000409006 NFKBIEO00221 500 aa29.63■■■□□ 2.33
KDELR3-202ENST00000409006 ZNF219Q9P2Y4 722 aaPredicted RBP29.63■■■□□ 2.33
KDELR3-202ENST00000409006 TSPYL4Q9UJ04 414 aa29.63■■■□□ 2.33
KDELR3-202ENST00000409006 DICER1Q9UPY3 1922 aaKnown RBP29.61■■■□□ 2.33
KDELR3-202ENST00000409006 FAM177BA6PVY3 158 aa29.61■■■□□ 2.33
KDELR3-202ENST00000409006 RGL2O15211 777 aa29.61■■■□□ 2.33
KDELR3-202ENST00000409006 C21orf2O43822 256 aa29.61■■■□□ 2.33
KDELR3-202ENST00000409006 SRGNP10124 158 aa29.61■■■□□ 2.33
KDELR3-202ENST00000409006 MYL6BP14649 208 aa29.61■■■□□ 2.33
KDELR3-202ENST00000409006 TTLL7Q6ZT98 887 aa29.61■■■□□ 2.33
KDELR3-202ENST00000409006 NEUROD2Q15784 382 aa29.6■■■□□ 2.33
KDELR3-202ENST00000409006 PRKRIP1Q9H875 184 aaPredicted RBP29.6■■■□□ 2.33
KDELR3-202ENST00000409006 LMNB1P20700 586 aa29.59■■■□□ 2.33
KDELR3-202ENST00000409006 STYK1Q6J9G0 422 aa29.58■■■□□ 2.33
KDELR3-202ENST00000409006 TNRC6CQ9HCJ0 1690 aaKnown RBP29.58■■■□□ 2.33
KDELR3-202ENST00000409006 ADAMTS8Q9UP79 889 aa29.58■■■□□ 2.33
KDELR3-202ENST00000409006 MAP3K15Q6ZN16 1313 aa29.57■■■□□ 2.32
KDELR3-202ENST00000409006 HSPA6P17066 643 aa29.57■■■□□ 2.32
KDELR3-202ENST00000409006 TPTE2Q6XPS3 522 aa29.57■■■□□ 2.32
KDELR3-202ENST00000409006 MASTLQ96GX5 879 aa29.57■■■□□ 2.32
KDELR3-202ENST00000409006 ERVV-1B6SEH8 477 aa29.56■■■□□ 2.32
KDELR3-202ENST00000409006 TOMM70O94826 608 aa29.56■■■□□ 2.32
KDELR3-202ENST00000409006 WDR43Q15061 677 aaKnown RBP eCLIP29.56■■■□□ 2.32
KDELR3-202ENST00000409006 CNKSR1Q969H4 720 aa29.56■■■□□ 2.32
KDELR3-202ENST00000409006 RUNDC1Q96C34 613 aa29.56■■■□□ 2.32
KDELR3-202ENST00000409006 TRIM35Q9UPQ4 493 aa29.56■■■□□ 2.32
KDELR3-202ENST00000409006 LMOD3Q0VAK6 560 aa29.55■■■□□ 2.32
KDELR3-202ENST00000409006 PRPF40BQ6NWY9 871 aaKnown RBP29.55■■■□□ 2.32
KDELR3-202ENST00000409006 KDM2BQ8NHM5 1336 aa29.54■■■□□ 2.32
KDELR3-202ENST00000409006 KLRG2A4D1S0 409 aaPredicted RBP29.54■■■□□ 2.32
KDELR3-202ENST00000409006 EIF2S2P20042 333 aaKnown RBP29.54■■■□□ 2.32
KDELR3-202ENST00000409006 PDIA6Q15084 440 aa29.54■■■□□ 2.32
KDELR3-202ENST00000409006 ZBTB3Q9H5J0 574 aa29.54■■■□□ 2.32
KDELR3-202ENST00000409006 RRAGCQ9HB90 399 aa29.54■■■□□ 2.32
KDELR3-202ENST00000409006 BABAM1Q9NWV8 329 aa29.54■■■□□ 2.32
KDELR3-202ENST00000409006 KIF6Q6ZMV9 814 aa29.53■■■□□ 2.32
KDELR3-202ENST00000409006 LRP10Q7Z4F1 713 aa29.53■■■□□ 2.32
KDELR3-202ENST00000409006 PROSER3Q2NL68 480 aa29.52■■■□□ 2.32
KDELR3-202ENST00000409006 ERBB4Q15303 1308 aa29.51■■■□□ 2.32
KDELR3-202ENST00000409006 ZC3H4Q9UPT8 1303 aaKnown RBP29.51■■■□□ 2.32
KDELR3-202ENST00000409006 ANXA1P04083 346 aa29.51■■■□□ 2.31
KDELR3-202ENST00000409006 NUTM1Q86Y26 1132 aa29.51■■■□□ 2.31
KDELR3-202ENST00000409006 CEP350Q5VT06 3117 aa29.51■■■□□ 2.31
KDELR3-202ENST00000409006 UBN2Q6ZU65 1347 aa29.5■■■□□ 2.31
KDELR3-202ENST00000409006 NPR1P16066 1061 aa29.5■■■□□ 2.31
KDELR3-202ENST00000409006 GPTP24298 496 aa29.5■■■□□ 2.31
KDELR3-202ENST00000409006 KRT24Q2M2I5 525 aa29.5■■■□□ 2.31
KDELR3-202ENST00000409006 C7orf43Q8WVR3 580 aa29.5■■■□□ 2.31
KDELR3-202ENST00000409006 ABCC12Q96J65 1359 aa29.5■■■□□ 2.31
KDELR3-202ENST00000409006 CHL1O00533 1208 aa29.49■■■□□ 2.31
KDELR3-202ENST00000409006 GLTPD2A6NH11 291 aa29.48■■■□□ 2.31
KDELR3-202ENST00000409006 NECTIN2Q92692 538 aa29.48■■■□□ 2.31
KDELR3-202ENST00000409006 LAS1LQ9Y4W2 734 aaKnown RBP29.48■■■□□ 2.31
KDELR3-202ENST00000409006 GTF2E1P29083 439 aaPredicted RBP29.47■■■□□ 2.31
KDELR3-202ENST00000409006 ERFEQ4G0M1 354 aa29.47■■■□□ 2.31
KDELR3-202ENST00000409006 ZNF34Q8IZ26 560 aa29.47■■■□□ 2.31
KDELR3-202ENST00000409006 TAOK3Q9H2K8 898 aa29.47■■■□□ 2.31
KDELR3-202ENST00000409006 LTBP3Q9NS15 1303 aa29.46■■■□□ 2.31
KDELR3-202ENST00000409006 SUSD4Q5VX71 490 aa29.46■■■□□ 2.31
KDELR3-202ENST00000409006 OLFM4Q6UX06 510 aa29.46■■■□□ 2.31
KDELR3-202ENST00000409006 GIGYF2Q6Y7W6 1299 aaKnown RBP29.46■■■□□ 2.31
KDELR3-202ENST00000409006 RBM46Q8TBY0 533 aaKnown RBP29.46■■■□□ 2.31
KDELR3-202ENST00000409006 ANKRD36CQ5JPF3 1778 aa29.46■■■□□ 2.31
KDELR3-202ENST00000409006 C16orf71Q8IYS4 520 aaPredicted RBP29.45■■■□□ 2.31
KDELR3-202ENST00000409006 NYXQ9GZU5 481 aa29.45■■■□□ 2.31
KDELR3-202ENST00000409006 WDR90Q96KV7 1748 aa29.42■■■□□ 2.3
KDELR3-202ENST00000409006 SOGA3Q5TF21 947 aa29.42■■■□□ 2.3
KDELR3-202ENST00000409006 IBTKQ9P2D0 1353 aaPredicted RBP29.41■■■□□ 2.3
KDELR3-202ENST00000409006 NTSR2O95665 410 aa29.41■■■□□ 2.3
KDELR3-202ENST00000409006 CRY2Q49AN0 593 aa29.41■■■□□ 2.3
KDELR3-202ENST00000409006 POTECB2RU33 542 aa29.4■■■□□ 2.3
KDELR3-202ENST00000409006 CCDC93Q567U6 631 aa29.4■■■□□ 2.3
KDELR3-202ENST00000409006 COPS6Q7L5N1 327 aa29.4■■■□□ 2.3
KDELR3-202ENST00000409006 APAF1O14727 1248 aa29.39■■■□□ 2.3
KDELR3-202ENST00000409006 AIMP1Q12904 312 aaKnown RBP29.39■■■□□ 2.3
KDELR3-202ENST00000409006 XAGE3Q8WTP9 111 aa29.39■■■□□ 2.3
KDELR3-202ENST00000409006 ALDH1B1P30837 517 aa29.38■■■□□ 2.29
KDELR3-202ENST00000409006 CCDC184Q52MB2 194 aa29.38■■■□□ 2.29
KDELR3-202ENST00000409006 C3orf67Q6ZVT6 689 aa29.38■■■□□ 2.29
KDELR3-202ENST00000409006 LAMB2P55268 1798 aa29.38■■■□□ 2.29
KDELR3-202ENST00000409006 RIC1Q4ADV7 1423 aa29.37■■■□□ 2.29
KDELR3-202ENST00000409006 VEGFAP15692 232 aaPredicted RBP29.37■■■□□ 2.29
KDELR3-202ENST00000409006 APLP1P51693 650 aa29.37■■■□□ 2.29
KDELR3-202ENST00000409006 CFAP44Q96MT7 982 aa29.37■■■□□ 2.29
KDELR3-202ENST00000409006 DDX21Q9NR30 783 aaKnown RBP eCLIP29.37■■■□□ 2.29
KDELR3-202ENST00000409006 FSTL1Q12841 308 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms