RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 RIPK4P57078 832 aa16.82■□□□□ 0.28
SNORD88B-201ENST00000408454 DDX10Q13206 875 aaKnown RBP16.82■□□□□ 0.28
SNORD88B-201ENST00000408454 PRR5LQ6MZQ0 368 aa16.82■□□□□ 0.28
SNORD88B-201ENST00000408454 NIP7Q9Y221 180 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNORD88B-201ENST00000408454 DCTN1Q14203 1278 aa16.81■□□□□ 0.28
SNORD88B-201ENST00000408454 LAMB4A4D0S4 1761 aa16.81■□□□□ 0.28
SNORD88B-201ENST00000408454 DLEC1Q9Y238 1755 aa16.8■□□□□ 0.28
SNORD88B-201ENST00000408454 LTBP3Q9NS15 1303 aa16.8■□□□□ 0.28
SNORD88B-201ENST00000408454 NPR1P16066 1061 aa16.8■□□□□ 0.28
SNORD88B-201ENST00000408454 APLP1P51693 650 aa16.8■□□□□ 0.28
SNORD88B-201ENST00000408454 FSTL1Q12841 308 aa16.8■□□□□ 0.28
SNORD88B-201ENST00000408454 HSP90AB3PQ58FF7 597 aa16.8■□□□□ 0.28
SNORD88B-201ENST00000408454 RBM46Q8TBY0 533 aaKnown RBP16.8■□□□□ 0.28
SNORD88B-201ENST00000408454 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
SNORD88B-201ENST00000408454 IBTKQ9P2D0 1353 aaPredicted RBP16.79■□□□□ 0.28
SNORD88B-201ENST00000408454 RNF123Q5XPI4 1314 aa16.79■□□□□ 0.28
SNORD88B-201ENST00000408454 EIF4A1P60842 406 aaKnown RBP16.79■□□□□ 0.28
SNORD88B-201ENST00000408454 PARP10Q53GL7 1025 aa16.79■□□□□ 0.28
SNORD88B-201ENST00000408454 CC2D2BQ6DHV5 1058 aa16.79■□□□□ 0.28
SNORD88B-201ENST00000408454 AFDNP55196 1824 aaKnown RBP16.79■□□□□ 0.28
SNORD88B-201ENST00000408454 BCORQ6W2J9 1755 aa16.79■□□□□ 0.28
SNORD88B-201ENST00000408454 KCNQ3O43525 872 aa16.78■□□□□ 0.28
SNORD88B-201ENST00000408454 PPP1R42Q7Z4L9 355 aa16.78■□□□□ 0.28
SNORD88B-201ENST00000408454 TAOK3Q9H2K8 898 aa16.78■□□□□ 0.28
SNORD88B-201ENST00000408454 MAP3K15Q6ZN16 1313 aa16.77■□□□□ 0.28
SNORD88B-201ENST00000408454 HOXB7P09629 217 aa16.77■□□□□ 0.28
SNORD88B-201ENST00000408454 SRGNP10124 158 aa16.77■□□□□ 0.28
SNORD88B-201ENST00000408454 TMPOP42166 694 aaKnown RBP16.77■□□□□ 0.28
SNORD88B-201ENST00000408454 CCDC93Q567U6 631 aa16.77■□□□□ 0.28
SNORD88B-201ENST00000408454 RTKN2Q8IZC4 609 aa16.77■□□□□ 0.28
SNORD88B-201ENST00000408454 TNRC6CQ9HCJ0 1690 aaKnown RBP16.76■□□□□ 0.27
SNORD88B-201ENST00000408454 KIF3CO14782 793 aa16.76■□□□□ 0.27
SNORD88B-201ENST00000408454 VEGFAP15692 232 aaPredicted RBP16.76■□□□□ 0.27
SNORD88B-201ENST00000408454 RRP7AQ9Y3A4 280 aaKnown RBP16.76■□□□□ 0.27
SNORD88B-201ENST00000408454 KDM3BQ7LBC6 1761 aa16.76■□□□□ 0.27
SNORD88B-201ENST00000408454 GLTPD2A6NH11 291 aa16.75■□□□□ 0.27
SNORD88B-201ENST00000408454 HSP90B1P14625 803 aaKnown RBP16.75■□□□□ 0.27
SNORD88B-201ENST00000408454 SMC1BQ8NDV3 1235 aa16.75■□□□□ 0.27
SNORD88B-201ENST00000408454 RPGRQ92834 1020 aaKnown RBP16.75■□□□□ 0.27
SNORD88B-201ENST00000408454 UTRNP46939 3433 aa16.74■□□□□ 0.27
SNORD88B-201ENST00000408454 RIC1Q4ADV7 1423 aa16.74■□□□□ 0.27
SNORD88B-201ENST00000408454 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
SNORD88B-201ENST00000408454 PRPF40BQ6NWY9 871 aaKnown RBP16.74■□□□□ 0.27
SNORD88B-201ENST00000408454 IQCA1LA6NCM1 817 aa16.73■□□□□ 0.27
SNORD88B-201ENST00000408454 NBPF26B4DH59 902 aa16.73■□□□□ 0.27
SNORD88B-201ENST00000408454 C21orf2O43822 256 aa16.73■□□□□ 0.27
SNORD88B-201ENST00000408454 NBPF10Q6P3W6 841 aaKnown RBP16.73■□□□□ 0.27
SNORD88B-201ENST00000408454 NBPF15Q8N660 670 aa16.73■□□□□ 0.27
SNORD88B-201ENST00000408454 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
SNORD88B-201ENST00000408454 DLG5Q8TDM6 1919 aa16.72■□□□□ 0.27
SNORD88B-201ENST00000408454 KLRG2A4D1S0 409 aaPredicted RBP16.72■□□□□ 0.27
SNORD88B-201ENST00000408454 MYL6BP14649 208 aa16.72■□□□□ 0.27
SNORD88B-201ENST00000408454 GIGYF2Q6Y7W6 1299 aaKnown RBP16.72■□□□□ 0.27
SNORD88B-201ENST00000408454 PRKRIP1Q9H875 184 aaPredicted RBP16.72■□□□□ 0.27
SNORD88B-201ENST00000408454 NGEFQ8N5V2 710 aa16.71■□□□□ 0.27
SNORD88B-201ENST00000408454 PRAMEF22A3QJZ6 481 aa16.7■□□□□ 0.26
SNORD88B-201ENST00000408454 RBM17Q96I25 401 aaKnown RBP16.7■□□□□ 0.26
SNORD88B-201ENST00000408454 NLRP3Q96P20 1036 aa16.7■□□□□ 0.26
SNORD88B-201ENST00000408454 NMRK2Q9NPI5 230 aa16.7■□□□□ 0.26
SNORD88B-201ENST00000408454 NFKBIEO00221 500 aa16.69■□□□□ 0.26
SNORD88B-201ENST00000408454 EIF2S2P20042 333 aaKnown RBP16.69■□□□□ 0.26
SNORD88B-201ENST00000408454 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
SNORD88B-201ENST00000408454 GNAI1P63096 354 aa16.69■□□□□ 0.26
SNORD88B-201ENST00000408454 FKBP4Q02790 459 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNORD88B-201ENST00000408454 RASSF7Q02833 373 aa16.69■□□□□ 0.26
SNORD88B-201ENST00000408454 NEUROD2Q15784 382 aa16.69■□□□□ 0.26
SNORD88B-201ENST00000408454 JDP2Q8WYK2 163 aa16.69■□□□□ 0.26
SNORD88B-201ENST00000408454 DDX21Q9NR30 783 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNORD88B-201ENST00000408454 DBF4Q9UBU7 674 aaPredicted RBP16.69■□□□□ 0.26
SNORD88B-201ENST00000408454 ARFGEF2Q9Y6D5 1785 aa16.69■□□□□ 0.26
SNORD88B-201ENST00000408454 TMC4Q7Z404 712 aa16.68■□□□□ 0.26
SNORD88B-201ENST00000408454 CFAP44Q96MT7 982 aa16.68■□□□□ 0.26
SNORD88B-201ENST00000408454 THUMPD2Q9BTF0 503 aaKnown RBP16.68■□□□□ 0.26
SNORD88B-201ENST00000408454 UTP14AQ9BVJ6 771 aaKnown RBP16.68■□□□□ 0.26
SNORD88B-201ENST00000408454 ZBTB3Q9H5J0 574 aa16.68■□□□□ 0.26
SNORD88B-201ENST00000408454 RRAGCQ9HB90 399 aa16.68■□□□□ 0.26
SNORD88B-201ENST00000408454 HYPKQ9NX55 129 aa16.68■□□□□ 0.26
SNORD88B-201ENST00000408454 LAS1LQ9Y4W2 734 aaKnown RBP16.68■□□□□ 0.26
SNORD88B-201ENST00000408454 FAM177BA6PVY3 158 aa16.67■□□□□ 0.26
SNORD88B-201ENST00000408454 CHL1O00533 1208 aa16.67■□□□□ 0.26
SNORD88B-201ENST00000408454 CRY2Q49AN0 593 aa16.67■□□□□ 0.26
SNORD88B-201ENST00000408454 HDGFL1Q5TGJ6 251 aa16.67■□□□□ 0.26
SNORD88B-201ENST00000408454 SUPT20HQ8NEM7 779 aa16.67■□□□□ 0.26
SNORD88B-201ENST00000408454 VPS33BQ9H267 617 aa16.67■□□□□ 0.26
SNORD88B-201ENST00000408454 ANKRD31Q8N7Z5 1873 aa16.66■□□□□ 0.26
SNORD88B-201ENST00000408454 CRAMP1Q96RY5 1269 aa16.66■□□□□ 0.26
SNORD88B-201ENST00000408454 PSMD1Q99460 953 aa16.66■□□□□ 0.26
SNORD88B-201ENST00000408454 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
SNORD88B-201ENST00000408454 GOLGB1Q14789 3259 aaKnown RBP16.66■□□□□ 0.26
SNORD88B-201ENST00000408454 TIAM2Q8IVF5 1701 aa16.65■□□□□ 0.26
SNORD88B-201ENST00000408454 HOXA10P31260 410 aaPredicted RBP16.65■□□□□ 0.26
SNORD88B-201ENST00000408454 HLFQ16534 295 aa16.65■□□□□ 0.26
SNORD88B-201ENST00000408454 ZNF34Q8IZ26 560 aa16.65■□□□□ 0.26
SNORD88B-201ENST00000408454 IFT57Q9NWB7 429 aa16.65■□□□□ 0.26
SNORD88B-201ENST00000408454 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
SNORD88B-201ENST00000408454 DDX58O95786 925 aaKnown RBP16.64■□□□□ 0.25
SNORD88B-201ENST00000408454 GPTP24298 496 aa16.64■□□□□ 0.25
SNORD88B-201ENST00000408454 CCDC146Q8IYE0 955 aa16.64■□□□□ 0.25
SNORD88B-201ENST00000408454 CCDC24Q8N4L8 307 aa16.64■□□□□ 0.25
SNORD88B-201ENST00000408454 SBF1O95248 1867 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms