RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 BRCA2P51587 3418 aa11.71□□□□□ -0.54
GPN1-202ENST00000407583 TRPM7Q96QT4 1865 aa11.7□□□□□ -0.54
GPN1-202ENST00000407583 CRKLP46109 303 aaKnown RBP11.7□□□□□ -0.54
GPN1-202ENST00000407583 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
GPN1-202ENST00000407583 HHIPL1Q96JK4 782 aa11.7□□□□□ -0.54
GPN1-202ENST00000407583 SAGE1Q9NXZ1 904 aa11.7□□□□□ -0.54
GPN1-202ENST00000407583 EDC4Q6P2E9 1401 aaKnown RBP11.7□□□□□ -0.54
GPN1-202ENST00000407583 RTL1A6NKG5 1358 aa11.69□□□□□ -0.54
GPN1-202ENST00000407583 CELF2O95319 508 aaKnown RBP11.69□□□□□ -0.54
GPN1-202ENST00000407583 SERPINB2P05120 415 aa11.69□□□□□ -0.54
GPN1-202ENST00000407583 NOGQ13253 232 aa11.69□□□□□ -0.54
GPN1-202ENST00000407583 UNC80Q8N2C7 3258 aa11.69□□□□□ -0.54
GPN1-202ENST00000407583 KIF7Q2M1P5 1343 aa11.69□□□□□ -0.54
GPN1-202ENST00000407583 COL11A2P13942 1736 aaPredicted RBP11.69□□□□□ -0.54
GPN1-202ENST00000407583 BICDL1Q6ZP65 573 aa11.68□□□□□ -0.54
GPN1-202ENST00000407583 NUDCQ9Y266 331 aa11.68□□□□□ -0.54
GPN1-202ENST00000407583 RANBP2P49792 3224 aaKnown RBP11.68□□□□□ -0.54
GPN1-202ENST00000407583 TRPA1O75762 1119 aa11.67□□□□□ -0.54
GPN1-202ENST00000407583 TRIOBPQ9H2D6 2365 aa11.67□□□□□ -0.54
GPN1-202ENST00000407583 ZPR1O75312 459 aa11.67□□□□□ -0.54
GPN1-202ENST00000407583 RRS1Q15050 365 aaKnown RBP11.67□□□□□ -0.54
GPN1-202ENST00000407583 AKAP4Q5JQC9 854 aa11.67□□□□□ -0.54
GPN1-202ENST00000407583 RNF186Q9NXI6 227 aa11.67□□□□□ -0.54
GPN1-202ENST00000407583 HTTP42858 3142 aa11.66□□□□□ -0.54
GPN1-202ENST00000407583 SCN11AQ9UI33 1791 aa11.66□□□□□ -0.54
GPN1-202ENST00000407583 ANP32AP39687 249 aaKnown RBP11.66□□□□□ -0.54
GPN1-202ENST00000407583 ZNF277Q9NRM2 450 aaPredicted RBP11.66□□□□□ -0.54
GPN1-202ENST00000407583 ANKRD31Q8N7Z5 1873 aa11.65□□□□□ -0.54
GPN1-202ENST00000407583 PRPF40BQ6NWY9 871 aaKnown RBP11.65□□□□□ -0.55
GPN1-202ENST00000407583 GPC2Q8N158 579 aa11.65□□□□□ -0.55
GPN1-202ENST00000407583 SYNE4Q8N205 404 aa11.65□□□□□ -0.55
GPN1-202ENST00000407583 SPG7Q9UQ90 795 aa11.65□□□□□ -0.55
GPN1-202ENST00000407583 CENPFP49454 3210 aa11.64□□□□□ -0.55
GPN1-202ENST00000407583 SLX4Q8IY92 1834 aa11.64□□□□□ -0.55
GPN1-202ENST00000407583 FZD9O00144 591 aa11.64□□□□□ -0.55
GPN1-202ENST00000407583 PHKG2P15735 406 aa11.64□□□□□ -0.55
GPN1-202ENST00000407583 EPS15P42566 896 aa11.64□□□□□ -0.55
GPN1-202ENST00000407583 RALBP1Q15311 655 aa11.64□□□□□ -0.55
GPN1-202ENST00000407583 PKN2Q16513 984 aaKnown RBP11.64□□□□□ -0.55
GPN1-202ENST00000407583 INTS5Q6P9B9 1019 aaKnown RBP11.64□□□□□ -0.55
GPN1-202ENST00000407583 HDGFL2Q7Z4V5 671 aaPredicted RBP11.64□□□□□ -0.55
GPN1-202ENST00000407583 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
GPN1-202ENST00000407583 ZNF408Q9H9D4 720 aa11.64□□□□□ -0.55
GPN1-202ENST00000407583 BCL2L12Q9HB09 334 aa11.64□□□□□ -0.55
GPN1-202ENST00000407583 NOP58Q9Y2X3 529 aaKnown RBP11.64□□□□□ -0.55
GPN1-202ENST00000407583 A0A1W2PP64 1363 aa11.63□□□□□ -0.55
GPN1-202ENST00000407583 VCANP13611 3396 aa11.63□□□□□ -0.55
GPN1-202ENST00000407583 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
GPN1-202ENST00000407583 FAM155AB1AL88 458 aaPredicted RBP11.63□□□□□ -0.55
GPN1-202ENST00000407583 SCNN1DP51172 638 aa11.63□□□□□ -0.55
GPN1-202ENST00000407583 HSP90AB2PQ58FF8 381 aa11.63□□□□□ -0.55
GPN1-202ENST00000407583 SOGA3Q5TF21 947 aa11.63□□□□□ -0.55
GPN1-202ENST00000407583 TMC1Q8TDI8 760 aa11.63□□□□□ -0.55
GPN1-202ENST00000407583 COG3Q96JB2 828 aa11.63□□□□□ -0.55
GPN1-202ENST00000407583 PTCD1O75127 700 aaKnown RBP11.62□□□□□ -0.55
GPN1-202ENST00000407583 LMOD1P29536 600 aaPredicted RBP11.62□□□□□ -0.55
GPN1-202ENST00000407583 KIF23Q02241 960 aaPredicted RBP11.62□□□□□ -0.55
GPN1-202ENST00000407583 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
GPN1-202ENST00000407583 MPNDQ8N594 471 aa11.62□□□□□ -0.55
GPN1-202ENST00000407583 COL25A1Q9BXS0 654 aaPredicted RBP11.62□□□□□ -0.55
GPN1-202ENST00000407583 GLIS2Q9BZE0 524 aaPredicted RBP11.62□□□□□ -0.55
GPN1-202ENST00000407583 GJA3Q9Y6H8 435 aa11.62□□□□□ -0.55
GPN1-202ENST00000407583 SPTBN5Q9NRC6 3674 aaKnown RBP11.61□□□□□ -0.55
GPN1-202ENST00000407583 TJP1Q07157 1748 aa11.61□□□□□ -0.55
GPN1-202ENST00000407583 PDE6BP35913 854 aa11.61□□□□□ -0.55
GPN1-202ENST00000407583 FKBP4Q02790 459 aaKnown RBP eCLIP11.61□□□□□ -0.55
GPN1-202ENST00000407583 USP50Q70EL3 339 aaPredicted RBP11.61□□□□□ -0.55
GPN1-202ENST00000407583 IFNL2Q8IZJ0 200 aa11.61□□□□□ -0.55
GPN1-202ENST00000407583 CNKSR1Q969H4 720 aa11.61□□□□□ -0.55
GPN1-202ENST00000407583 OTUD5Q96G74 571 aa11.61□□□□□ -0.55
GPN1-202ENST00000407583 BRIP1Q9BX63 1249 aa11.61□□□□□ -0.55
GPN1-202ENST00000407583 SLC12A5Q9H2X9 1139 aa11.61□□□□□ -0.55
GPN1-202ENST00000407583 NARFQ9UHQ1 456 aa11.61□□□□□ -0.55
GPN1-202ENST00000407583 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
GPN1-202ENST00000407583 SOS1Q07889 1333 aaPredicted RBP11.61□□□□□ -0.55
GPN1-202ENST00000407583 CACNA1SQ13698 1873 aa11.6□□□□□ -0.55
GPN1-202ENST00000407583 HUNKP57058 714 aa11.6□□□□□ -0.55
GPN1-202ENST00000407583 CCDC93Q567U6 631 aa11.6□□□□□ -0.55
GPN1-202ENST00000407583 C7orf43Q8WVR3 580 aa11.6□□□□□ -0.55
GPN1-202ENST00000407583 RNF216Q9NWF9 866 aaPredicted RBP11.6□□□□□ -0.55
GPN1-202ENST00000407583 NCAPD2Q15021 1401 aa11.6□□□□□ -0.55
GPN1-202ENST00000407583 BCORQ6W2J9 1755 aa11.6□□□□□ -0.55
GPN1-202ENST00000407583 FBXO46Q6PJ61 603 aaPredicted RBP11.59□□□□□ -0.55
GPN1-202ENST00000407583 OLFM4Q6UX06 510 aa11.59□□□□□ -0.55
GPN1-202ENST00000407583 CCDC136Q96JN2 1154 aa11.59□□□□□ -0.55
GPN1-202ENST00000407583 HDAC9Q9UKV0 1011 aa11.59□□□□□ -0.55
GPN1-202ENST00000407583 LAMA3Q16787 3333 aa11.59□□□□□ -0.55
GPN1-202ENST00000407583 COL15A1P39059 1388 aa11.58□□□□□ -0.56
GPN1-202ENST00000407583 MYBBP1AQ9BQG0 1328 aaKnown RBP11.58□□□□□ -0.56
GPN1-202ENST00000407583 MS4A1P11836 297 aa11.58□□□□□ -0.56
GPN1-202ENST00000407583 IARSP41252 1262 aaKnown RBP11.58□□□□□ -0.56
GPN1-202ENST00000407583 STYK1Q6J9G0 422 aa11.58□□□□□ -0.56
GPN1-202ENST00000407583 PRR5LQ6MZQ0 368 aa11.58□□□□□ -0.56
GPN1-202ENST00000407583 IPO9Q96P70 1041 aaKnown RBP11.58□□□□□ -0.56
GPN1-202ENST00000407583 ARFGEF2Q9Y6D5 1785 aa11.58□□□□□ -0.56
GPN1-202ENST00000407583 COL4A5P29400 1685 aa11.58□□□□□ -0.56
GPN1-202ENST00000407583 TCERG1O14776 1098 aaKnown RBP11.57□□□□□ -0.56
GPN1-202ENST00000407583 SRGNP10124 158 aa11.57□□□□□ -0.56
GPN1-202ENST00000407583 CHRDL2Q6WN34 429 aa11.57□□□□□ -0.56
GPN1-202ENST00000407583 ZNF296Q8WUU4 475 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms