RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-208ENST00000407417 ITPK1Q13572 414 aa10.39□□□□□ -0.75
NFIA-208ENST00000407417 SMIM5Q71RC9 77 aa10.39□□□□□ -0.75
NFIA-208ENST00000407417 LINC00116Q8NCU8 138 aa10.39□□□□□ -0.75
NFIA-208ENST00000407417 GAS2L2Q8NHY3 880 aa10.39□□□□□ -0.75
NFIA-208ENST00000407417 SLC4A9Q96Q91 983 aa10.39□□□□□ -0.75
NFIA-208ENST00000407417 RBM42Q9BTD8 480 aaKnown RBP10.39□□□□□ -0.75
NFIA-208ENST00000407417 MAP3K5Q99683 1374 aa10.38□□□□□ -0.75
NFIA-208ENST00000407417 SLC52A2Q9HAB3 445 aa10.38□□□□□ -0.75
NFIA-208ENST00000407417 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.38□□□□□ -0.75
NFIA-208ENST00000407417 ATF5Q9Y2D1 282 aaPredicted RBP10.38□□□□□ -0.75
NFIA-208ENST00000407417 LRP5O75197 1615 aa10.38□□□□□ -0.75
NFIA-208ENST00000407417 PNPLA7Q6ZV29 1317 aa10.38□□□□□ -0.75
NFIA-208ENST00000407417 SENP3-EIF4A1A0A087X0R7 540 aa10.37□□□□□ -0.75
NFIA-208ENST00000407417 GNAT3A8MTJ3 354 aa10.37□□□□□ -0.75
NFIA-208ENST00000407417 PTCD1O75127 700 aaKnown RBP10.37□□□□□ -0.75
NFIA-208ENST00000407417 ATP6V1AP38606 617 aa10.37□□□□□ -0.75
NFIA-208ENST00000407417 AMIGO3Q86WK7 504 aa10.37□□□□□ -0.75
NFIA-208ENST00000407417 IL17REQ8NFR9 667 aa10.37□□□□□ -0.75
NFIA-208ENST00000407417 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
NFIA-208ENST00000407417 SLC39A6Q13433 755 aa10.37□□□□□ -0.75
NFIA-208ENST00000407417 SPON1Q9HCB6 807 aa10.37□□□□□ -0.75
NFIA-208ENST00000407417 C5P01031 1676 aa10.37□□□□□ -0.75
NFIA-208ENST00000407417 PLEKHF1Q96S99 279 aa10.36□□□□□ -0.75
NFIA-208ENST00000407417 FEZ1Q99689 392 aa10.36□□□□□ -0.75
NFIA-208ENST00000407417 RWDD1Q9H446 243 aaPredicted RBP10.36□□□□□ -0.75
NFIA-208ENST00000407417 MRC1P22897 1456 aa10.36□□□□□ -0.75
NFIA-208ENST00000407417 FAM193AP78312 1265 aa10.36□□□□□ -0.75
NFIA-208ENST00000407417 ADAMTS7Q9UKP4 1686 aa10.35□□□□□ -0.75
NFIA-208ENST00000407417 TUBGCP6Q96RT7 1819 aa10.35□□□□□ -0.75
NFIA-208ENST00000407417 C4BP0C0L5 1744 aa10.35□□□□□ -0.75
NFIA-208ENST00000407417 DCTN1Q14203 1278 aa10.35□□□□□ -0.75
NFIA-208ENST00000407417 WDR43Q15061 677 aaKnown RBP eCLIP10.35□□□□□ -0.75
NFIA-208ENST00000407417 MCM10Q7L590 875 aa10.35□□□□□ -0.75
NFIA-208ENST00000407417 COL23A1Q86Y22 540 aaPredicted RBP10.35□□□□□ -0.75
NFIA-208ENST00000407417 FTSJ3Q8IY81 847 aaKnown RBP10.35□□□□□ -0.75
NFIA-208ENST00000407417 AK7Q96M32 723 aa10.35□□□□□ -0.75
NFIA-208ENST00000407417 CHMP4BQ9H444 224 aaKnown RBP10.35□□□□□ -0.75
NFIA-208ENST00000407417 PRDM10Q9NQV6 1147 aa10.35□□□□□ -0.75
NFIA-208ENST00000407417 ADAMTS8Q9UP79 889 aa10.35□□□□□ -0.75
NFIA-208ENST00000407417 PHF14O94880 888 aa10.34□□□□□ -0.75
NFIA-208ENST00000407417 PTGER2P43116 358 aa10.34□□□□□ -0.75
NFIA-208ENST00000407417 TAF1LQ8IZX4 1826 aa10.34□□□□□ -0.75
NFIA-208ENST00000407417 GABPB1Q06547 395 aaPredicted RBP10.34□□□□□ -0.75
NFIA-208ENST00000407417 KIAA2012Q0VF49 1180 aa10.34□□□□□ -0.75
NFIA-208ENST00000407417 TEFQ10587 303 aa10.34□□□□□ -0.75
NFIA-208ENST00000407417 MTFR1LQ9H019 292 aa10.34□□□□□ -0.75
NFIA-208ENST00000407417 CEMIPQ8WUJ3 1361 aa10.34□□□□□ -0.75
NFIA-208ENST00000407417 GNPATO15228 680 aa10.33□□□□□ -0.76
NFIA-208ENST00000407417 CDK11BP21127 795 aaKnown RBP10.33□□□□□ -0.76
NFIA-208ENST00000407417 CCDC146Q8IYE0 955 aa10.33□□□□□ -0.76
NFIA-208ENST00000407417 DNAJC2Q99543 621 aaKnown RBP10.33□□□□□ -0.76
NFIA-208ENST00000407417 PPP1R1BQ9UD71 204 aaPredicted RBP10.33□□□□□ -0.76
NFIA-208ENST00000407417 MSL1Q68DK7 614 aa10.33□□□□□ -0.76
NFIA-208ENST00000407417 CREBRFQ8IUR6 639 aa10.33□□□□□ -0.76
NFIA-208ENST00000407417 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
NFIA-208ENST00000407417 RTF1Q92541 710 aaKnown RBP10.33□□□□□ -0.76
NFIA-208ENST00000407417 SGIP1Q9BQI5 828 aa10.33□□□□□ -0.76
NFIA-208ENST00000407417 TSPYL1Q9H0U9 437 aa10.33□□□□□ -0.76
NFIA-208ENST00000407417 PDZRN3Q9UPQ7 1066 aa10.33□□□□□ -0.76
NFIA-208ENST00000407417 DDX49Q9Y6V7 483 aaKnown RBP10.33□□□□□ -0.76
NFIA-208ENST00000407417 KCPQ6ZWJ8 1503 aa10.32□□□□□ -0.76
NFIA-208ENST00000407417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.32□□□□□ -0.76
NFIA-208ENST00000407417 KCNQ3O43525 872 aa10.32□□□□□ -0.76
NFIA-208ENST00000407417 DNAJC10Q8IXB1 793 aa10.32□□□□□ -0.76
NFIA-208ENST00000407417 QSER1Q2KHR3 1735 aa10.32□□□□□ -0.76
NFIA-208ENST00000407417 CCDC66A2RUB6 948 aa10.31□□□□□ -0.76
NFIA-208ENST00000407417 NFE2L2Q16236 605 aa10.31□□□□□ -0.76
NFIA-208ENST00000407417 THUMPD2Q9BTF0 503 aaKnown RBP10.31□□□□□ -0.76
NFIA-208ENST00000407417 KIF3AQ9Y496 699 aa10.31□□□□□ -0.76
NFIA-208ENST00000407417 KIF16BQ96L93 1317 aa10.31□□□□□ -0.76
NFIA-208ENST00000407417 CRKLP46109 303 aaKnown RBP10.31□□□□□ -0.76
NFIA-208ENST00000407417 SLC16A10Q8TF71 515 aa10.31□□□□□ -0.76
NFIA-208ENST00000407417 TJP1Q07157 1748 aa10.31□□□□□ -0.76
NFIA-208ENST00000407417 CNTNAP4Q9C0A0 1308 aa10.31□□□□□ -0.76
NFIA-208ENST00000407417 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 CHRM1P11229 460 aaPredicted RBP10.3□□□□□ -0.76
NFIA-208ENST00000407417 HMGB2P26583 209 aaKnown RBP10.3□□□□□ -0.76
NFIA-208ENST00000407417 NUCB2P80303 420 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 ZNF790Q6PG37 636 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 TTC5Q8N0Z6 440 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 PDCL2Q8N4E4 241 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 ZNF496Q96IT1 587 aaPredicted RBP10.3□□□□□ -0.76
NFIA-208ENST00000407417 RRP7AQ9Y3A4 280 aaKnown RBP10.3□□□□□ -0.76
NFIA-208ENST00000407417 ZNF831Q5JPB2 1677 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 HTATSF1O43719 755 aaKnown RBP10.3□□□□□ -0.76
NFIA-208ENST00000407417 SSFA2P28290 1259 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 SYCP1Q15431 976 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 ZSCAN23Q3MJ62 389 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 RC3H1Q5TC82 1133 aaKnown RBP10.3□□□□□ -0.76
NFIA-208ENST00000407417 TEX2Q8IWB9 1127 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 ZNF710Q8N1W2 664 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 SPRYD3Q8NCJ5 442 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 FLAD1Q8NFF5 587 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 MIS18AQ9NYP9 233 aa10.3□□□□□ -0.76
NFIA-208ENST00000407417 RTCBQ9Y3I0 505 aaKnown RBP10.3□□□□□ -0.76
NFIA-208ENST00000407417 UBR3Q6ZT12 1888 aa10.29□□□□□ -0.76
NFIA-208ENST00000407417 COL5A3P25940 1745 aaPredicted RBP10.29□□□□□ -0.76
NFIA-208ENST00000407417 SIPA1L3O60292 1781 aaPredicted RBP10.29□□□□□ -0.76
NFIA-208ENST00000407417 BCAR3O75815 825 aa10.29□□□□□ -0.76
NFIA-208ENST00000407417 CYP19A1P11511 503 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms