RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 SMC1BQ8NDV3 1235 aa17.27■□□□□ 0.36
PRAME-206ENST00000406503 PDZRN3Q9UPQ7 1066 aa17.27■□□□□ 0.36
PRAME-206ENST00000406503 NBPF26B4DH59 902 aa17.26■□□□□ 0.35
PRAME-206ENST00000406503 SRGNP10124 158 aa17.26■□□□□ 0.35
PRAME-206ENST00000406503 VEGFAP15692 232 aaPredicted RBP17.26■□□□□ 0.35
PRAME-206ENST00000406503 NBPF10Q6P3W6 841 aaKnown RBP17.26■□□□□ 0.35
PRAME-206ENST00000406503 NBPF15Q8N660 670 aa17.26■□□□□ 0.35
PRAME-206ENST00000406503 CNBD1Q8NA66 436 aa17.26■□□□□ 0.35
PRAME-206ENST00000406503 CFAP53Q96M91 514 aa17.26■□□□□ 0.35
PRAME-206ENST00000406503 SETDB2Q96T68 719 aa17.26■□□□□ 0.35
PRAME-206ENST00000406503 ZNF219Q9P2Y4 722 aaPredicted RBP17.26■□□□□ 0.35
PRAME-206ENST00000406503 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
PRAME-206ENST00000406503 U2AF1L5P0DN76 240 aaPredicted RBP17.25■□□□□ 0.35
PRAME-206ENST00000406503 U2AF1Q01081 240 aaKnown RBP eCLIP17.25■□□□□ 0.352e-24■□□□□ 8.6
PRAME-206ENST00000406503 ADAMTSL1Q8N6G6 1762 aa17.25■□□□□ 0.35
PRAME-206ENST00000406503 STYK1Q6J9G0 422 aa17.24■□□□□ 0.35
PRAME-206ENST00000406503 PRPF40BQ6NWY9 871 aaKnown RBP17.24■□□□□ 0.35
PRAME-206ENST00000406503 SNRPA1P09661 255 aaKnown RBP17.23■□□□□ 0.35
PRAME-206ENST00000406503 C7orf43Q8WVR3 580 aa17.23■□□□□ 0.35
PRAME-206ENST00000406503 NUDCQ9Y266 331 aa17.23■□□□□ 0.35
PRAME-206ENST00000406503 SNED1Q8TER0 1413 aa17.22■□□□□ 0.35
PRAME-206ENST00000406503 ST5P78524 1137 aa17.22■□□□□ 0.35
PRAME-206ENST00000406503 ERFEQ4G0M1 354 aa17.22■□□□□ 0.35
PRAME-206ENST00000406503 CLEC4GQ6UXB4 293 aa17.22■□□□□ 0.35
PRAME-206ENST00000406503 MASTLQ96GX5 879 aa17.22■□□□□ 0.35
PRAME-206ENST00000406503 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
PRAME-206ENST00000406503 LAMB2P55268 1798 aa17.21■□□□□ 0.35
PRAME-206ENST00000406503 ANKRD36CQ5JPF3 1778 aa17.21■□□□□ 0.35
PRAME-206ENST00000406503 KLRG2A4D1S0 409 aaPredicted RBP17.21■□□□□ 0.35
PRAME-206ENST00000406503 CNKSR1Q969H4 720 aa17.21■□□□□ 0.35
PRAME-206ENST00000406503 HTATSF1O43719 755 aaKnown RBP17.2■□□□□ 0.34
PRAME-206ENST00000406503 POTEIP0CG38 1075 aa17.2■□□□□ 0.34
PRAME-206ENST00000406503 POTEJP0CG39 1038 aa17.2■□□□□ 0.34
PRAME-206ENST00000406503 HLFQ16534 295 aa17.2■□□□□ 0.34
PRAME-206ENST00000406503 RTF1Q92541 710 aaKnown RBP17.2■□□□□ 0.34
PRAME-206ENST00000406503 MIS18AQ9NYP9 233 aa17.2■□□□□ 0.34
PRAME-206ENST00000406503 DDNO94850 711 aaPredicted RBP17.19■□□□□ 0.34
PRAME-206ENST00000406503 COL13A1Q5TAT6 717 aaPredicted RBP17.19■□□□□ 0.34
PRAME-206ENST00000406503 NBPF5PQ86XG9 351 aaPredicted RBP17.19■□□□□ 0.34
PRAME-206ENST00000406503 COL4A5P29400 1685 aa17.19■□□□□ 0.34
PRAME-206ENST00000406503 ABCC12Q96J65 1359 aa17.18■□□□□ 0.34
PRAME-206ENST00000406503 RGL2O15211 777 aa17.18■□□□□ 0.34
PRAME-206ENST00000406503 OLFM4Q6UX06 510 aa17.18■□□□□ 0.34
PRAME-206ENST00000406503 NPM2Q86SE8 214 aaKnown RBP17.18■□□□□ 0.34
PRAME-206ENST00000406503 LTBP1Q14766 1721 aa17.18■□□□□ 0.34
PRAME-206ENST00000406503 TAF7Q15545 349 aaPredicted RBP17.17■□□□□ 0.34
PRAME-206ENST00000406503 DPY19L2Q6NUT2 758 aa17.17■□□□□ 0.34
PRAME-206ENST00000406503 PLEKHF1Q96S99 279 aa17.17■□□□□ 0.34
PRAME-206ENST00000406503 NIP7Q9Y221 180 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRAME-206ENST00000406503 ZNF652Q9Y2D9 606 aa17.17■□□□□ 0.34
PRAME-206ENST00000406503 NPHP1O15259 732 aa17.16■□□□□ 0.34
PRAME-206ENST00000406503 NPR1P16066 1061 aa17.15■□□□□ 0.34
PRAME-206ENST00000406503 CCDC93Q567U6 631 aa17.15■□□□□ 0.34
PRAME-206ENST00000406503 SOGA3Q5TF21 947 aa17.15■□□□□ 0.34
PRAME-206ENST00000406503 TAF1P21675 1872 aa17.15■□□□□ 0.34
PRAME-206ENST00000406503 FAM177BA6PVY3 158 aa17.14■□□□□ 0.33
PRAME-206ENST00000406503 THUMPD2Q9BTF0 503 aaKnown RBP17.14■□□□□ 0.33
PRAME-206ENST00000406503 ZNF541Q9H0D2 1346 aa17.14■□□□□ 0.33
PRAME-206ENST00000406503 EIF4A1P60842 406 aaKnown RBP17.13■□□□□ 0.33
PRAME-206ENST00000406503 FKBP4Q02790 459 aaKnown RBP eCLIP17.13■□□□□ 0.33
PRAME-206ENST00000406503 TPTE2Q6XPS3 522 aa17.13■□□□□ 0.33
PRAME-206ENST00000406503 TTLL7Q6ZT98 887 aa17.13■□□□□ 0.33
PRAME-206ENST00000406503 SLC51AQ86UW1 340 aa17.13■□□□□ 0.33
PRAME-206ENST00000406503 L3MBTL3Q96JM7 780 aaPredicted RBP17.13■□□□□ 0.33
PRAME-206ENST00000406503 ZNF277Q9NRM2 450 aaPredicted RBP17.13■□□□□ 0.33
PRAME-206ENST00000406503 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
PRAME-206ENST00000406503 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
PRAME-206ENST00000406503 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
PRAME-206ENST00000406503 CHADLQ6NUI6 762 aa17.12■□□□□ 0.33
PRAME-206ENST00000406503 UBN2Q6ZU65 1347 aa17.12■□□□□ 0.33
PRAME-206ENST00000406503 PASKQ96RG2 1323 aa17.12■□□□□ 0.33
PRAME-206ENST00000406503 TRPM7Q96QT4 1865 aa17.12■□□□□ 0.33
PRAME-206ENST00000406503 CRY2Q49AN0 593 aa17.11■□□□□ 0.33
PRAME-206ENST00000406503 NUTM1Q86Y26 1132 aa17.11■□□□□ 0.33
PRAME-206ENST00000406503 TAF1DQ9H5J8 278 aaPredicted RBP17.11■□□□□ 0.33
PRAME-206ENST00000406503 MAP3K15Q6ZN16 1313 aa17.11■□□□□ 0.33
PRAME-206ENST00000406503 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
PRAME-206ENST00000406503 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
PRAME-206ENST00000406503 IBTKQ9P2D0 1353 aaPredicted RBP17.1■□□□□ 0.33
PRAME-206ENST00000406503 ERVV-1B6SEH8 477 aa17.09■□□□□ 0.33
PRAME-206ENST00000406503 LRP10Q7Z4F1 713 aa17.09■□□□□ 0.33
PRAME-206ENST00000406503 CREBZFQ9NS37 354 aa17.09■□□□□ 0.33
PRAME-206ENST00000406503 DDX60Q8IY21 1712 aaKnown RBP17.09■□□□□ 0.33
PRAME-206ENST00000406503 FZD9O00144 591 aa17.08■□□□□ 0.32
PRAME-206ENST00000406503 IARSP41252 1262 aaKnown RBP17.08■□□□□ 0.32
PRAME-206ENST00000406503 PNISRQ8TF01 805 aaKnown RBP17.08■□□□□ 0.32
PRAME-206ENST00000406503 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
PRAME-206ENST00000406503 MYL6BP14649 208 aa17.07■□□□□ 0.32
PRAME-206ENST00000406503 ALDH1B1P30837 517 aa17.07■□□□□ 0.32
PRAME-206ENST00000406503 SUSD4Q5VX71 490 aa17.07■□□□□ 0.32
PRAME-206ENST00000406503 LDHDQ86WU2 507 aa17.07■□□□□ 0.32
PRAME-206ENST00000406503 RTKN2Q8IZC4 609 aa17.07■□□□□ 0.32
PRAME-206ENST00000406503 SYNE4Q8N205 404 aa17.07■□□□□ 0.32
PRAME-206ENST00000406503 MKRN1Q9UHC7 482 aaKnown RBP17.07■□□□□ 0.32
PRAME-206ENST00000406503 RRP7AQ9Y3A4 280 aaKnown RBP17.07■□□□□ 0.32
PRAME-206ENST00000406503 CNTNAP1P78357 1384 aa17.06■□□□□ 0.32
PRAME-206ENST00000406503 IQCA1LA6NCM1 817 aa17.06■□□□□ 0.32
PRAME-206ENST00000406503 NTSR2O95665 410 aa17.06■□□□□ 0.32
PRAME-206ENST00000406503 GPTP24298 496 aa17.06■□□□□ 0.32
PRAME-206ENST00000406503 C3orf67Q6ZVT6 689 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms