RNA–Protein interactions for RNA: ENST00000405234.1

TUBBP9-201, Transcript of tubulin beta class I pseudogene 9, humanhuman

BASIC

Gene TUBBP9, Length 1,099 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP9-201ENST00000405234 SLC4A9Q96Q91 983 aa11.77□□□□□ -0.53
TUBBP9-201ENST00000405234 TAF1LQ8IZX4 1826 aa11.76□□□□□ -0.53
TUBBP9-201ENST00000405234 GRXCR2A6NFK2 248 aa11.76□□□□□ -0.53
TUBBP9-201ENST00000405234 GNPATO15228 680 aa11.76□□□□□ -0.53
TUBBP9-201ENST00000405234 HOXB3P14651 431 aaPredicted RBP11.76□□□□□ -0.53
TUBBP9-201ENST00000405234 SSFA2P28290 1259 aa11.76□□□□□ -0.53
TUBBP9-201ENST00000405234 NFATC2IPQ8NCF5 419 aa11.76□□□□□ -0.53
TUBBP9-201ENST00000405234 ZSWIM6Q9HCJ5 1215 aa11.76□□□□□ -0.53
TUBBP9-201ENST00000405234 C4BP0C0L5 1744 aa11.76□□□□□ -0.53
TUBBP9-201ENST00000405234 UTRNP46939 3433 aa11.75□□□□□ -0.53
TUBBP9-201ENST00000405234 YBX3P16989 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
TUBBP9-201ENST00000405234 C1orf141Q5JVX7 400 aa11.75□□□□□ -0.53
TUBBP9-201ENST00000405234 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.75□□□□□ -0.53
TUBBP9-201ENST00000405234 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
TUBBP9-201ENST00000405234 PTCD1O75127 700 aaKnown RBP11.74□□□□□ -0.53
TUBBP9-201ENST00000405234 HMOX1P09601 288 aa11.74□□□□□ -0.53
TUBBP9-201ENST00000405234 TRAPPC3LQ5T215 181 aa11.74□□□□□ -0.53
TUBBP9-201ENST00000405234 KDM6AO15550 1401 aaPredicted RBP11.73□□□□□ -0.53
TUBBP9-201ENST00000405234 DDX12PQ92771 950 aa11.73□□□□□ -0.53
TUBBP9-201ENST00000405234 PLEKHG2Q9H7P9 1386 aa11.73□□□□□ -0.53
TUBBP9-201ENST00000405234 LGR6Q9HBX8 967 aa11.73□□□□□ -0.53
TUBBP9-201ENST00000405234 RTCBQ9Y3I0 505 aaKnown RBP11.73□□□□□ -0.53
TUBBP9-201ENST00000405234 GRIN3BO60391 1043 aa11.72□□□□□ -0.53
TUBBP9-201ENST00000405234 DIAPH1O60610 1272 aaKnown RBP11.72□□□□□ -0.53
TUBBP9-201ENST00000405234 ARSIQ5FYB1 569 aa11.72□□□□□ -0.53
TUBBP9-201ENST00000405234 WWC3Q9ULE0 1092 aa11.72□□□□□ -0.53
TUBBP9-201ENST00000405234 KDRP35968 1356 aa11.71□□□□□ -0.53
TUBBP9-201ENST00000405234 RPS6KA4O75676 772 aa11.71□□□□□ -0.53
TUBBP9-201ENST00000405234 AKAP4Q5JQC9 854 aa11.71□□□□□ -0.53
TUBBP9-201ENST00000405234 RC3H1Q5TC82 1133 aaKnown RBP11.71□□□□□ -0.53
TUBBP9-201ENST00000405234 UBR3Q6ZT12 1888 aa11.71□□□□□ -0.53
TUBBP9-201ENST00000405234 NUDT7P0C024 238 aa11.7□□□□□ -0.54
TUBBP9-201ENST00000405234 MTHFSDQ2M296 383 aaKnown RBP11.7□□□□□ -0.54
TUBBP9-201ENST00000405234 CHD4Q14839 1912 aa11.69□□□□□ -0.54
TUBBP9-201ENST00000405234 RNMTO43148 476 aaKnown RBP11.69□□□□□ -0.54
TUBBP9-201ENST00000405234 MMP10P09238 476 aa11.69□□□□□ -0.54
TUBBP9-201ENST00000405234 RFC4P35249 363 aa11.69□□□□□ -0.54
TUBBP9-201ENST00000405234 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
TUBBP9-201ENST00000405234 CNTNAP4Q9C0A0 1308 aa11.68□□□□□ -0.54
TUBBP9-201ENST00000405234 U2SURPO15042 1029 aaKnown RBP11.68□□□□□ -0.54
TUBBP9-201ENST00000405234 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
TUBBP9-201ENST00000405234 KHSRPQ92945 711 aaKnown RBP eCLIP11.68□□□□□ -0.54
TUBBP9-201ENST00000405234 SLC52A2Q9HAB3 445 aa11.68□□□□□ -0.54
TUBBP9-201ENST00000405234 GYS1P13807 737 aa11.67□□□□□ -0.54
TUBBP9-201ENST00000405234 PRKCSHP14314 528 aaPredicted RBP11.67□□□□□ -0.54
TUBBP9-201ENST00000405234 CRKLP46109 303 aaKnown RBP11.67□□□□□ -0.54
TUBBP9-201ENST00000405234 RBM26Q5T8P6 1007 aaKnown RBP11.67□□□□□ -0.54
TUBBP9-201ENST00000405234 DNAJC10Q8IXB1 793 aa11.67□□□□□ -0.54
TUBBP9-201ENST00000405234 GPR153Q6NV75 609 aa11.66□□□□□ -0.54
TUBBP9-201ENST00000405234 INTS5Q6P9B9 1019 aaKnown RBP11.66□□□□□ -0.54
TUBBP9-201ENST00000405234 GPIHBP1Q8IV16 184 aa11.66□□□□□ -0.54
TUBBP9-201ENST00000405234 SRP68Q9UHB9 627 aaKnown RBP11.66□□□□□ -0.54
TUBBP9-201ENST00000405234 A0A0G2JLW4 131 aa11.65□□□□□ -0.54
TUBBP9-201ENST00000405234 C1QTNF8P60827 252 aa11.65□□□□□ -0.54
TUBBP9-201ENST00000405234 PARP3Q9Y6F1 533 aa11.65□□□□□ -0.54
TUBBP9-201ENST00000405234 GOLGB1Q14789 3259 aaKnown RBP11.64□□□□□ -0.55
TUBBP9-201ENST00000405234 TGFB2P61812 414 aa11.64□□□□□ -0.55
TUBBP9-201ENST00000405234 IL17REQ8NFR9 667 aa11.64□□□□□ -0.55
TUBBP9-201ENST00000405234 EPAS1Q99814 870 aa11.64□□□□□ -0.55
TUBBP9-201ENST00000405234 CCDC87Q9NVE4 849 aa11.64□□□□□ -0.55
TUBBP9-201ENST00000405234 NPC1L1Q9UHC9 1359 aa11.64□□□□□ -0.55
TUBBP9-201ENST00000405234 ZNF831Q5JPB2 1677 aa11.63□□□□□ -0.55
TUBBP9-201ENST00000405234 CYP19A1P11511 503 aaPredicted RBP11.63□□□□□ -0.55
TUBBP9-201ENST00000405234 DPEP1P16444 411 aa11.63□□□□□ -0.55
TUBBP9-201ENST00000405234 BCS1LQ9Y276 419 aa11.63□□□□□ -0.55
TUBBP9-201ENST00000405234 SCN11AQ9UI33 1791 aa11.63□□□□□ -0.55
TUBBP9-201ENST00000405234 MYH14Q7Z406 1995 aaKnown RBP11.63□□□□□ -0.55
TUBBP9-201ENST00000405234 COL5A3P25940 1745 aaPredicted RBP11.63□□□□□ -0.55
TUBBP9-201ENST00000405234 GIGYF1O75420 1035 aaPredicted RBP11.62□□□□□ -0.55
TUBBP9-201ENST00000405234 HOXB1P14653 301 aaPredicted RBP11.62□□□□□ -0.55
TUBBP9-201ENST00000405234 OSBPP22059 807 aa11.62□□□□□ -0.55
TUBBP9-201ENST00000405234 USPL1Q5W0Q7 1092 aa11.62□□□□□ -0.55
TUBBP9-201ENST00000405234 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
TUBBP9-201ENST00000405234 PHACTR3Q96KR7 559 aa11.62□□□□□ -0.55
TUBBP9-201ENST00000405234 USP42Q9H9J4 1324 aaKnown RBP11.61□□□□□ -0.55
TUBBP9-201ENST00000405234 GNAT3A8MTJ3 354 aa11.61□□□□□ -0.55
TUBBP9-201ENST00000405234 ZPR1O75312 459 aa11.61□□□□□ -0.55
TUBBP9-201ENST00000405234 TM4SF1P30408 202 aa11.61□□□□□ -0.55
TUBBP9-201ENST00000405234 DDR1Q08345 913 aa11.61□□□□□ -0.55
TUBBP9-201ENST00000405234 TYW1BQ6NUM6 668 aa11.61□□□□□ -0.55
TUBBP9-201ENST00000405234 GAS2L2Q8NHY3 880 aa11.61□□□□□ -0.55
TUBBP9-201ENST00000405234 ZNF526Q8TF50 670 aaPredicted RBP11.61□□□□□ -0.55
TUBBP9-201ENST00000405234 ZBTB1Q9Y2K1 713 aa11.61□□□□□ -0.55
TUBBP9-201ENST00000405234 CICQ96RK0 1608 aaPredicted RBP11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 COL3A1P02461 1466 aaPredicted RBP11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 SENP3-EIF4A1A0A087X0R7 540 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 MAP3K7O43318 606 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 FCHSD2O94868 740 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 KCNA3P22001 575 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 CANXP27824 592 aaKnown RBP11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 PPP2R1AP30153 589 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 TEFQ10587 303 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 ARHGAP27Q6ZUM4 889 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 TTC5Q8N0Z6 440 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 FBXW7Q969H0 707 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 CFAP53Q96M91 514 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 TJP1Q07157 1748 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 ATP10DQ9P241 1426 aa11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
TUBBP9-201ENST00000405234 PXDNLA1KZ92 1463 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms