RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 AOPEPQ8N6M6 819 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 CCDC191Q8NCU4 936 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 PUS7Q96PZ0 661 aaKnown RBP8.63□□□□□ -1.03
HDAC9-202ENST00000405010 RUFY1Q96T51 708 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 TMX1Q9H3N1 280 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 NCOA3Q9Y6Q9 1424 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 CYP2E1P05181 493 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-202ENST00000405010 CUL4AQ13619 759 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 RASSF4Q9H2L5 321 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 ECHDC1Q9NTX5 307 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 USP16Q9Y5T5 823 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 KDM5AP29375 1690 aaKnown RBP8.63□□□□□ -1.03
HDAC9-202ENST00000405010 TRAPPC8Q9Y2L5 1435 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 ADAMTS12P58397 1594 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 GNG11P61952 73 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 TRDNQ13061 729 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 JMYQ8N9B5 988 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 RASSF8Q8NHQ8 419 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 NEUROD6Q96NK8 337 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 A0A1W2PP64 1363 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 GTF2A1P52655 376 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-202ENST00000405010 BOLA2Q9H3K6 86 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 ZSWIM4Q9H7M6 989 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 PLA2R1Q13018 1463 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 TRPM1Q7Z4N2 1603 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 DHX16O60231 1041 aaKnown RBP8.62□□□□□ -1.03
HDAC9-202ENST00000405010 BRPF1P55201 1214 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-202ENST00000405010 LRRFIP1Q32MZ4 808 aaKnown RBP8.62□□□□□ -1.03
HDAC9-202ENST00000405010 PPFIBP1Q86W92 1011 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 SLC52A1Q9NWF4 448 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 RBM8AQ9Y5S9 174 aaKnown RBP8.62□□□□□ -1.03
HDAC9-202ENST00000405010 SLC3A2P08195 630 aaKnown RBP8.62□□□□□ -1.03
HDAC9-202ENST00000405010 TAF7LQ5H9L4 462 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 ZNF518AQ6AHZ1 1483 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 SNX14Q9Y5W7 946 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 ERVK-7P63135 1459 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 C1orf141Q5JVX7 400 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 VPS53Q5VIR6 699 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 WAPLQ7Z5K2 1190 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 CAGE1Q8TC20 777 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 PLEKHF1Q96S99 279 aa8.62□□□□□ -1.03
HDAC9-202ENST00000405010 ZSCAN16Q9H4T2 348 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-202ENST00000405010 RDXP35241 583 aaKnown RBP8.61□□□□□ -1.03
HDAC9-202ENST00000405010 NCBP1Q09161 790 aaKnown RBP8.61□□□□□ -1.03
HDAC9-202ENST00000405010 RIC3Q7Z5B4 369 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 BRF1Q92994 677 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 SRRTQ9BXP5 876 aaKnown RBP8.61□□□□□ -1.03
HDAC9-202ENST00000405010 GBP3Q9H0R5 595 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 LIG1P18858 919 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 HSPA4P34932 840 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 USP8P40818 1118 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 MCM6Q14566 821 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 SAFBQ15424 915 aaKnown RBP eCLIP8.61□□□□□ -1.03
HDAC9-202ENST00000405010 KIF4BQ2VIQ3 1234 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 FILIP1LQ4L180 1135 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 KRBA2Q6ZNG9 492 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 TXNDC2Q86VQ3 553 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 EVI5LQ96CN4 794 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 SPTLC3Q9NUV7 552 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.61□□□□□ -1.03
HDAC9-202ENST00000405010 NRBP1Q9UHY1 535 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 CCDC61Q9Y6R9 512 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 TUBB4AP04350 444 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 TAF7Q15545 349 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-202ENST00000405010 GPATCH11Q8N954 259 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 SMARCE1Q969G3 411 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 CLSTN2Q9H4D0 955 aa8.61□□□□□ -1.03
HDAC9-202ENST00000405010 RAD50Q92878 1312 aa8.6□□□□□ -1.03
HDAC9-202ENST00000405010 PPFIA3O75145 1194 aa8.6□□□□□ -1.03
HDAC9-202ENST00000405010 ATP2B1P20020 1258 aa8.6□□□□□ -1.03
HDAC9-202ENST00000405010 WASHC4Q2M389 1173 aa8.6□□□□□ -1.03
HDAC9-202ENST00000405010 CCDC8Q9H0W5 538 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-202ENST00000405010 SGSM2O43147 1006 aa8.6□□□□□ -1.03
HDAC9-202ENST00000405010 CAPN2P17655 700 aa8.6□□□□□ -1.03
HDAC9-202ENST00000405010 ERCC6LQ2NKX8 1250 aa8.6□□□□□ -1.03
HDAC9-202ENST00000405010 ISM2Q6H9L7 571 aa8.6□□□□□ -1.03
HDAC9-202ENST00000405010 NFXL1Q6ZNB6 911 aa8.6□□□□□ -1.03
HDAC9-202ENST00000405010 CCT2P78371 535 aaKnown RBP8.6□□□□□ -1.03
HDAC9-202ENST00000405010 ZNF330Q9Y3S2 320 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-202ENST00000405010 RGS12O14924 1447 aa8.6□□□□□ -1.03
HDAC9-202ENST00000405010 LMOD1P29536 600 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-202ENST00000405010 FAM193AP78312 1265 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 G2E3Q7L622 706 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 NUDT16Q96DE0 195 aaKnown RBP8.59□□□□□ -1.03
HDAC9-202ENST00000405010 IFNKQ9P0W0 207 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 DDX41Q9UJV9 622 aaKnown RBP8.59□□□□□ -1.03
HDAC9-202ENST00000405010 MTMR6Q9Y217 621 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 MAST1Q9Y2H9 1570 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 SBNO2Q9Y2G9 1366 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 GOLGA6L9A6NEM1 432 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 KIF5CO60282 957 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 IVLP07476 585 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 EVCP57679 992 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 NLRP6P59044 892 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 AKAP17AQ02040 695 aaKnown RBP8.59□□□□□ -1.03
HDAC9-202ENST00000405010 SYCP1Q15431 976 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 TERF2Q15554 542 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 TTC6Q86TZ1 520 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 ZNF710Q8N1W2 664 aa8.59□□□□□ -1.03
HDAC9-202ENST00000405010 CCDC12Q8WUD4 166 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms