RNA–Protein interactions for RNA: ENST00000404025.2

NLRC4-204, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NLRC4, Length 3,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-204ENST00000404025 BICC1Q9H694 974 aaKnown RBP9.14□□□□□ -0.95
NLRC4-204ENST00000404025 C19orf44Q9H6X5 657 aa9.14□□□□□ -0.95
NLRC4-204ENST00000404025 DDX21Q9NR30 783 aaKnown RBP eCLIP9.14□□□□□ -0.95
NLRC4-204ENST00000404025 FAM208AQ9UK61 1670 aaKnown RBP9.14□□□□□ -0.95
NLRC4-204ENST00000404025 DTNBO60941 627 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 ZNF790Q6PG37 636 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 KLHDC4Q8TBB5 520 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 MYD88Q99836 296 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 GDPD2Q9HCC8 539 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 SNX14Q9Y5W7 946 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 LTN1O94822 1766 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 LRRC37A3O60309 1634 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 NFAT5O94916 1531 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 PDE4CQ08493 712 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 COPS6Q7L5N1 327 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 RASEFQ8IZ41 740 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 XAGE3Q8WTP9 111 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 RAD50Q92878 1312 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 CASTP20810 708 aaKnown RBP9.13□□□□□ -0.95
NLRC4-204ENST00000404025 CUL4AQ13619 759 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 PRPF40BQ6NWY9 871 aaKnown RBP9.13□□□□□ -0.95
NLRC4-204ENST00000404025 GPT2Q8TD30 523 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 NAP1L5Q96NT1 182 aaPredicted RBP9.13□□□□□ -0.95
NLRC4-204ENST00000404025 BOLA2Q9H3K6 86 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 ERBB3P21860 1342 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 TTC41PQ6P2S7 1318 aa9.13□□□□□ -0.95
NLRC4-204ENST00000404025 LARP1Q6PKG0 1096 aaKnown RBP9.12□□□□□ -0.95
NLRC4-204ENST00000404025 LSG1Q9H089 658 aaKnown RBP9.12□□□□□ -0.95
NLRC4-204ENST00000404025 CCDC9Q9Y3X0 531 aaKnown RBP9.12□□□□□ -0.95
NLRC4-204ENST00000404025 SYCE3A1L190 88 aa9.12□□□□□ -0.95
NLRC4-204ENST00000404025 ESPNB1AK53 854 aa9.12□□□□□ -0.95
NLRC4-204ENST00000404025 BRD1O95696 1058 aa9.12□□□□□ -0.95
NLRC4-204ENST00000404025 INTS4Q96HW7 963 aaKnown RBP9.12□□□□□ -0.95
NLRC4-204ENST00000404025 JAKMIP1Q96N16 626 aaKnown RBP9.12□□□□□ -0.95
NLRC4-204ENST00000404025 PRIM1P49642 420 aaKnown RBP9.12□□□□□ -0.95
NLRC4-204ENST00000404025 AK2P54819 239 aa9.12□□□□□ -0.95
NLRC4-204ENST00000404025 ZNF496Q96IT1 587 aaPredicted RBP9.12□□□□□ -0.95
NLRC4-204ENST00000404025 NSFL1CQ9UNZ2 370 aaKnown RBP9.12□□□□□ -0.95
NLRC4-204ENST00000404025 IFNL2Q8IZJ0 200 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 FSD1Q9BTV5 496 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 SLC52A2Q9HAB3 445 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 SMC3Q9UQE7 1217 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 MARF1Q9Y4F3 1742 aaKnown RBP9.11□□□□□ -0.95
NLRC4-204ENST00000404025 PTH1RQ03431 593 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 MTX1Q13505 466 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 RNF214Q8ND24 703 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 EAF2Q96CJ1 260 aaPredicted RBP9.11□□□□□ -0.95
NLRC4-204ENST00000404025 CHMP3Q9Y3E7 222 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 NPHP3Q7Z494 1330 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 CCDC173Q0VFZ6 552 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 EVI5LQ96CN4 794 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 TMEM63CQ9P1W3 806 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 USP16Q9Y5T5 823 aa9.11□□□□□ -0.95
NLRC4-204ENST00000404025 WDR33Q9C0J8 1336 aaKnown RBP9.1□□□□□ -0.95
NLRC4-204ENST00000404025 CHD2O14647 1828 aaKnown RBP9.1□□□□□ -0.95
NLRC4-204ENST00000404025 CACNA1FO60840 1977 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 ATP5J2-PTCD1G3V325 749 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 PTCD1O75127 700 aaKnown RBP9.1□□□□□ -0.95
NLRC4-204ENST00000404025 SASH1O94885 1247 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 MBD3O95983 291 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 PHKG2P15735 406 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 ZKSCAN1P17029 563 aaPredicted RBP9.1□□□□□ -0.95
NLRC4-204ENST00000404025 ZNF445P59923 1031 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 ANKRD13DQ6ZTN6 518 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 RBSNQ9H1K0 784 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 LIMCH1Q9UPQ0 1083 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 IGKV5-2P06315 115 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 CABP4P57796 275 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 CCDC83Q8IWF9 413 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 FAM227BQ96M60 508 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 PDRG1Q9NUG6 133 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 TLR7Q9NYK1 1049 aaKnown RBP9.1□□□□□ -0.95
NLRC4-204ENST00000404025 NCAPD2Q15021 1401 aa9.1□□□□□ -0.95
NLRC4-204ENST00000404025 RGPD2P0DJD1 1756 aa9.09□□□□□ -0.95
NLRC4-204ENST00000404025 PDIA6Q15084 440 aa9.09□□□□□ -0.95
NLRC4-204ENST00000404025 KAZALD1Q96I82 304 aa9.09□□□□□ -0.95
NLRC4-204ENST00000404025 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.09□□□□□ -0.95
NLRC4-204ENST00000404025 CYP46A1Q9Y6A2 500 aa9.09□□□□□ -0.95
NLRC4-204ENST00000404025 EPB41L2O43491 1005 aaKnown RBP9.09□□□□□ -0.95
NLRC4-204ENST00000404025 SNRPA1P09661 255 aaKnown RBP9.09□□□□□ -0.95
NLRC4-204ENST00000404025 NMIQ13287 307 aaPredicted RBP9.09□□□□□ -0.95
NLRC4-204ENST00000404025 UBE3BQ7Z3V4 1068 aa9.09□□□□□ -0.95
NLRC4-204ENST00000404025 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.09□□□□□ -0.95
NLRC4-204ENST00000404025 NEURL1BA8MQ27 555 aa9.09□□□□□ -0.95
NLRC4-204ENST00000404025 CLCN1P35523 988 aa9.09□□□□□ -0.95
NLRC4-204ENST00000404025 GCKRQ14397 625 aa9.09□□□□□ -0.95
NLRC4-204ENST00000404025 ADCK5Q3MIX3 580 aa9.09□□□□□ -0.95
NLRC4-204ENST00000404025 RUFY3Q7L099 469 aa9.09□□□□□ -0.95
NLRC4-204ENST00000404025 C1orf167Q5SNV9 1468 aa9.09□□□□□ -0.96
NLRC4-204ENST00000404025 EPHA10Q5JZY3 1008 aa9.08□□□□□ -0.96
NLRC4-204ENST00000404025 SYAP1Q96A49 352 aaPredicted RBP9.08□□□□□ -0.96
NLRC4-204ENST00000404025 METTL22Q9BUU2 404 aaPredicted RBP9.08□□□□□ -0.96
NLRC4-204ENST00000404025 RBM8AQ9Y5S9 174 aaKnown RBP9.08□□□□□ -0.96
NLRC4-204ENST00000404025 GADD45BO75293 160 aaPredicted RBP9.08□□□□□ -0.96
NLRC4-204ENST00000404025 USP48Q86UV5 1035 aa9.08□□□□□ -0.96
NLRC4-204ENST00000404025 EDC3Q96F86 508 aaKnown RBP9.08□□□□□ -0.96
NLRC4-204ENST00000404025 TCEANC2Q96MN5 208 aa9.08□□□□□ -0.96
NLRC4-204ENST00000404025 FMNL2Q96PY5 1086 aa9.08□□□□□ -0.96
NLRC4-204ENST00000404025 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
NLRC4-204ENST00000404025 A0A087WZG4 1122 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms