RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 BCS1LQ9Y276 419 aa8.8□□□□□ -1
HMGB3P19-201ENST00000403971 ZBTB39O15060 712 aa8.79□□□□□ -1
HMGB3P19-201ENST00000403971 PTSQ03393 145 aa8.79□□□□□ -1
HMGB3P19-201ENST00000403971 SF3B2Q13435 895 aaKnown RBP8.79□□□□□ -1
HMGB3P19-201ENST00000403971 C11orf91Q3C1V1 193 aa8.79□□□□□ -1
HMGB3P19-201ENST00000403971 ARSJQ5FYB0 599 aaPredicted RBP8.79□□□□□ -1
HMGB3P19-201ENST00000403971 BICDL1Q6ZP65 573 aa8.79□□□□□ -1
HMGB3P19-201ENST00000403971 ZNF280CQ8ND82 737 aa8.79□□□□□ -1
HMGB3P19-201ENST00000403971 ZIC5Q96T25 663 aa8.79□□□□□ -1
HMGB3P19-201ENST00000403971 SENP2Q9HC62 589 aa8.79□□□□□ -1
HMGB3P19-201ENST00000403971 STIM2Q9P246 746 aa8.79□□□□□ -1
HMGB3P19-201ENST00000403971 POTECB2RU33 542 aa8.78□□□□□ -1
HMGB3P19-201ENST00000403971 ETFBKMTQ8IXQ9 262 aa8.78□□□□□ -1
HMGB3P19-201ENST00000403971 KIFC2Q96AC6 838 aa8.78□□□□□ -1
HMGB3P19-201ENST00000403971 DYRK1BQ9Y463 629 aa8.78□□□□□ -1
HMGB3P19-201ENST00000403971 MFAP1P55081 439 aaKnown RBP8.77□□□□□ -1.01
HMGB3P19-201ENST00000403971 ARHGAP4P98171 946 aa8.77□□□□□ -1.01
HMGB3P19-201ENST00000403971 IFT43Q96FT9 208 aa8.77□□□□□ -1.01
HMGB3P19-201ENST00000403971 SUSD3Q96L08 255 aa8.77□□□□□ -1.01
HMGB3P19-201ENST00000403971 A0A1W2PNR3 127 aa8.76□□□□□ -1.01
HMGB3P19-201ENST00000403971 SLC35F4A4IF30 521 aa8.76□□□□□ -1.01
HMGB3P19-201ENST00000403971 F11P03951 625 aa8.76□□□□□ -1.01
HMGB3P19-201ENST00000403971 NPR3P17342 541 aa8.76□□□□□ -1.01
HMGB3P19-201ENST00000403971 BRD2P25440 801 aaKnown RBP8.76□□□□□ -1.01
HMGB3P19-201ENST00000403971 LRRC69Q6ZNQ3 347 aa8.76□□□□□ -1.01
HMGB3P19-201ENST00000403971 ATCAYQ86WG3 371 aa8.76□□□□□ -1.01
HMGB3P19-201ENST00000403971 C11orf95C9JLR9 678 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P19-201ENST00000403971 FAM13AO94988 1023 aa8.75□□□□□ -1.01
HMGB3P19-201ENST00000403971 EIF1AXP47813 144 aaKnown RBP8.75□□□□□ -1.01
HMGB3P19-201ENST00000403971 CCDC27Q2M243 656 aa8.75□□□□□ -1.01
HMGB3P19-201ENST00000403971 RIPOR1Q6ZS17 1223 aa8.75□□□□□ -1.01
HMGB3P19-201ENST00000403971 CCDC155Q8N6L0 562 aa8.75□□□□□ -1.01
HMGB3P19-201ENST00000403971 CUEDC1Q9NWM3 386 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P19-201ENST00000403971 THBS1P07996 1170 aa8.74□□□□□ -1.01
HMGB3P19-201ENST00000403971 NOM1Q5C9Z4 860 aaKnown RBP8.74□□□□□ -1.01
HMGB3P19-201ENST00000403971 TREML1Q86YW5 311 aa8.74□□□□□ -1.01
HMGB3P19-201ENST00000403971 CCDC9Q9Y3X0 531 aaKnown RBP8.74□□□□□ -1.01
HMGB3P19-201ENST00000403971 TGFBR3LH3BV60 316 aa8.73□□□□□ -1.01
HMGB3P19-201ENST00000403971 ABTB2Q8N961 1025 aa8.73□□□□□ -1.01
HMGB3P19-201ENST00000403971 CRISPLD1Q9H336 500 aa8.73□□□□□ -1.01
HMGB3P19-201ENST00000403971 NEUROD4Q9HD90 331 aa8.73□□□□□ -1.01
HMGB3P19-201ENST00000403971 CCDC87Q9NVE4 849 aa8.73□□□□□ -1.01
HMGB3P19-201ENST00000403971 FZD6O60353 706 aa8.72□□□□□ -1.01
HMGB3P19-201ENST00000403971 MICAL2O94851 1124 aa8.72□□□□□ -1.01
HMGB3P19-201ENST00000403971 ZAP70P43403 619 aa8.72□□□□□ -1.01
HMGB3P19-201ENST00000403971 AAMPQ13685 434 aa8.72□□□□□ -1.01
HMGB3P19-201ENST00000403971 PGBD3Q8N328 593 aa8.72□□□□□ -1.01
HMGB3P19-201ENST00000403971 DMGDHQ9UI17 866 aaKnown RBP8.72□□□□□ -1.01
HMGB3P19-201ENST00000403971 GPC6Q9Y625 555 aaPredicted RBP8.72□□□□□ -1.01
HMGB3P19-201ENST00000403971 GJA3Q9Y6H8 435 aa8.72□□□□□ -1.01
HMGB3P19-201ENST00000403971 MARSP56192 900 aaKnown RBP8.71□□□□□ -1.02
HMGB3P19-201ENST00000403971 USP20Q9Y2K6 914 aa8.71□□□□□ -1.02
HMGB3P19-201ENST00000403971 OPLAHO14841 1288 aa8.7□□□□□ -1.02
HMGB3P19-201ENST00000403971 MAPK1P28482 360 aa8.7□□□□□ -1.02
HMGB3P19-201ENST00000403971 IDH3AP50213 366 aa8.7□□□□□ -1.02
HMGB3P19-201ENST00000403971 DBN1Q16643 649 aa8.7□□□□□ -1.02
HMGB3P19-201ENST00000403971 BTLAQ7Z6A9 289 aa8.7□□□□□ -1.02
HMGB3P19-201ENST00000403971 ANKIB1Q9P2G1 1089 aa8.7□□□□□ -1.02
HMGB3P19-201ENST00000403971 ITGA6P23229 1130 aa8.69□□□□□ -1.02
HMGB3P19-201ENST00000403971 DNM1Q05193 864 aaKnown RBP8.69□□□□□ -1.02
HMGB3P19-201ENST00000403971 HIF1AQ16665 826 aa8.69□□□□□ -1.02
HMGB3P19-201ENST00000403971 IER5Q5VY09 327 aa8.69□□□□□ -1.02
HMGB3P19-201ENST00000403971 ALKBH2Q6NS38 261 aa8.69□□□□□ -1.02
HMGB3P19-201ENST00000403971 GPR152Q8TDT2 470 aa8.69□□□□□ -1.02
HMGB3P19-201ENST00000403971 EDEM1Q92611 657 aa8.69□□□□□ -1.02
HMGB3P19-201ENST00000403971 ZCCHC2Q9C0B9 1178 aaKnown RBP8.69□□□□□ -1.02
HMGB3P19-201ENST00000403971 NUCKS1Q9H1E3 243 aaKnown RBP8.69□□□□□ -1.02
HMGB3P19-201ENST00000403971 TYRO3Q06418 890 aa8.68□□□□□ -1.02
HMGB3P19-201ENST00000403971 UBAP2LQ14157 1087 aaKnown RBP8.68□□□□□ -1.02
HMGB3P19-201ENST00000403971 EFHC2Q5JST6 749 aa8.68□□□□□ -1.02
HMGB3P19-201ENST00000403971 NLRP8Q86W28 1048 aa8.68□□□□□ -1.02
HMGB3P19-201ENST00000403971 CEP63Q96MT8 703 aa8.68□□□□□ -1.02
HMGB3P19-201ENST00000403971 DCTN4Q9UJW0 460 aa8.68□□□□□ -1.02
HMGB3P19-201ENST00000403971 BRPF3Q9ULD4 1205 aa8.68□□□□□ -1.02
HMGB3P19-201ENST00000403971 POLIQ9UNA4 740 aa8.68□□□□□ -1.02
HMGB3P19-201ENST00000403971 PPFIA3O75145 1194 aa8.67□□□□□ -1.02
HMGB3P19-201ENST00000403971 GRNP28799 593 aaKnown RBP8.67□□□□□ -1.02
HMGB3P19-201ENST00000403971 INPP5BP32019 993 aa8.67□□□□□ -1.02
HMGB3P19-201ENST00000403971 DNAJC14Q6Y2X3 702 aaPredicted RBP8.67□□□□□ -1.02
HMGB3P19-201ENST00000403971 RGL4Q8IZJ4 473 aa8.67□□□□□ -1.02
HMGB3P19-201ENST00000403971 ZNF837Q96EG3 531 aaPredicted RBP8.67□□□□□ -1.02
HMGB3P19-201ENST00000403971 DCDC2BA2VCK2 349 aa8.66□□□□□ -1.02
HMGB3P19-201ENST00000403971 NDUFB5O43674 189 aa8.66□□□□□ -1.02
HMGB3P19-201ENST00000403971 PDGFAP04085 211 aa8.66□□□□□ -1.02
HMGB3P19-201ENST00000403971 TRIM22Q8IYM9 498 aa8.66□□□□□ -1.02
HMGB3P19-201ENST00000403971 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
HMGB3P19-201ENST00000403971 HCN2Q9UL51 889 aa8.66□□□□□ -1.02
HMGB3P19-201ENST00000403971 ATXN7O15265 892 aaPredicted RBP8.65□□□□□ -1.02
HMGB3P19-201ENST00000403971 MZF1P28698 734 aaPredicted RBP8.65□□□□□ -1.02
HMGB3P19-201ENST00000403971 VEGFBP49765 207 aa8.65□□□□□ -1.02
HMGB3P19-201ENST00000403971 ARSDP51689 593 aa8.65□□□□□ -1.02
HMGB3P19-201ENST00000403971 GTPBP3Q969Y2 492 aaKnown RBP8.65□□□□□ -1.02
HMGB3P19-201ENST00000403971 NUDT16Q96DE0 195 aaKnown RBP8.65□□□□□ -1.02
HMGB3P19-201ENST00000403971 BRD7Q9NPI1 651 aa8.65□□□□□ -1.02
HMGB3P19-201ENST00000403971 RTCBQ9Y3I0 505 aaKnown RBP8.65□□□□□ -1.02
HMGB3P19-201ENST00000403971 CDC14CA4D256 554 aa8.64□□□□□ -1.03
HMGB3P19-201ENST00000403971 A6NHS1 94 aa8.64□□□□□ -1.03
HMGB3P19-201ENST00000403971 H7C1W4 665 aa8.64□□□□□ -1.03
HMGB3P19-201ENST00000403971 KHNYNO15037 678 aaKnown RBP8.64□□□□□ -1.03
HMGB3P19-201ENST00000403971 BNIP3LO60238 219 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms