RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 ZNF652Q9Y2D9 606 aa16.47■□□□□ 0.23
PRAME-204ENST00000403441 FER1L6Q2WGJ9 1857 aa16.47■□□□□ 0.23
PRAME-204ENST00000403441 KCNQ3O43525 872 aa16.46■□□□□ 0.23
PRAME-204ENST00000403441 U2AF1L5P0DN76 240 aaPredicted RBP16.46■□□□□ 0.23
PRAME-204ENST00000403441 U2AF1Q01081 240 aaKnown RBP eCLIP16.46■□□□□ 0.232e-24■□□□□ 8.6
PRAME-204ENST00000403441 PRPF40BQ6NWY9 871 aaKnown RBP16.46■□□□□ 0.23
PRAME-204ENST00000403441 NBPF5PQ86XG9 351 aaPredicted RBP16.46■□□□□ 0.23
PRAME-204ENST00000403441 DICER1Q9UPY3 1922 aaKnown RBP16.45■□□□□ 0.22
PRAME-204ENST00000403441 SNRPA1P09661 255 aaKnown RBP16.45■□□□□ 0.22
PRAME-204ENST00000403441 SRGNP10124 158 aa16.45■□□□□ 0.22
PRAME-204ENST00000403441 CLEC4GQ6UXB4 293 aa16.45■□□□□ 0.22
PRAME-204ENST00000403441 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
PRAME-204ENST00000403441 ARFGEF2Q9Y6D5 1785 aa16.44■□□□□ 0.22
PRAME-204ENST00000403441 USP16Q9Y5T5 823 aa16.44■□□□□ 0.22
PRAME-204ENST00000403441 PCNTO95613 3336 aa16.44■□□□□ 0.22
PRAME-204ENST00000403441 ZEB1P37275 1124 aaPredicted RBP16.43■□□□□ 0.22
PRAME-204ENST00000403441 PIP4K2AP48426 406 aaPredicted RBP16.43■□□□□ 0.22
PRAME-204ENST00000403441 MCM10Q7L590 875 aa16.43■□□□□ 0.22
PRAME-204ENST00000403441 CACNA1SQ13698 1873 aa16.43■□□□□ 0.22
PRAME-204ENST00000403441 SLX4Q8IY92 1834 aa16.42■□□□□ 0.22
PRAME-204ENST00000403441 POTECB2RU33 542 aa16.42■□□□□ 0.22
PRAME-204ENST00000403441 RGL2O15211 777 aa16.42■□□□□ 0.22
PRAME-204ENST00000403441 PRAMEF22A3QJZ6 481 aa16.41■□□□□ 0.22
PRAME-204ENST00000403441 HTATSF1O43719 755 aaKnown RBP16.41■□□□□ 0.22
PRAME-204ENST00000403441 NPR1P16066 1061 aa16.41■□□□□ 0.22
PRAME-204ENST00000403441 PPP2R1AP30153 589 aa16.41■□□□□ 0.22
PRAME-204ENST00000403441 CCDC93Q567U6 631 aa16.41■□□□□ 0.22
PRAME-204ENST00000403441 COL13A1Q5TAT6 717 aaPredicted RBP16.41■□□□□ 0.22
PRAME-204ENST00000403441 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
PRAME-204ENST00000403441 CHADLQ6NUI6 762 aa16.4■□□□□ 0.22
PRAME-204ENST00000403441 NIP7Q9Y221 180 aaKnown RBP eCLIP16.4■□□□□ 0.22
PRAME-204ENST00000403441 IQCA1LA6NCM1 817 aa16.39■□□□□ 0.21
PRAME-204ENST00000403441 DDNO94850 711 aaPredicted RBP16.39■□□□□ 0.21
PRAME-204ENST00000403441 NEFMP07197 916 aa16.39■□□□□ 0.21
PRAME-204ENST00000403441 DCTN1Q14203 1278 aa16.38■□□□□ 0.21
PRAME-204ENST00000403441 TNS4Q8IZW8 715 aa16.38■□□□□ 0.21
PRAME-204ENST00000403441 LAMB4A4D0S4 1761 aa16.38■□□□□ 0.21
PRAME-204ENST00000403441 NBPF26B4DH59 902 aa16.37■□□□□ 0.21
PRAME-204ENST00000403441 HSPA1AP0DMV8 641 aaKnown RBP16.37■□□□□ 0.21
PRAME-204ENST00000403441 HSPA1BP0DMV9 641 aaKnown RBP16.37■□□□□ 0.21
PRAME-204ENST00000403441 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
PRAME-204ENST00000403441 FKBP4Q02790 459 aaKnown RBP eCLIP16.37■□□□□ 0.21
PRAME-204ENST00000403441 TAF7Q15545 349 aaPredicted RBP16.37■□□□□ 0.21
PRAME-204ENST00000403441 NBPF10Q6P3W6 841 aaKnown RBP16.37■□□□□ 0.21
PRAME-204ENST00000403441 NBPF15Q8N660 670 aa16.37■□□□□ 0.21
PRAME-204ENST00000403441 C7orf43Q8WVR3 580 aa16.37■□□□□ 0.21
PRAME-204ENST00000403441 CREBZFQ9NS37 354 aa16.37■□□□□ 0.21
PRAME-204ENST00000403441 KLRG2A4D1S0 409 aaPredicted RBP16.36■□□□□ 0.21
PRAME-204ENST00000403441 FAM177BA6PVY3 158 aa16.36■□□□□ 0.21
PRAME-204ENST00000403441 RTKN2Q8IZC4 609 aa16.36■□□□□ 0.21
PRAME-204ENST00000403441 L3MBTL3Q96JM7 780 aaPredicted RBP16.36■□□□□ 0.21
PRAME-204ENST00000403441 LDHDQ86WU2 507 aa16.35■□□□□ 0.21
PRAME-204ENST00000403441 PNISRQ8TF01 805 aaKnown RBP16.35■□□□□ 0.21
PRAME-204ENST00000403441 SCN4AP35499 1836 aa16.35■□□□□ 0.21
PRAME-204ENST00000403441 POTEIP0CG38 1075 aa16.34■□□□□ 0.21
PRAME-204ENST00000403441 POTEJP0CG39 1038 aa16.34■□□□□ 0.21
PRAME-204ENST00000403441 ALDH1B1P30837 517 aa16.34■□□□□ 0.21
PRAME-204ENST00000403441 NYXQ9GZU5 481 aa16.34■□□□□ 0.21
PRAME-204ENST00000403441 ZNF277Q9NRM2 450 aaPredicted RBP16.34■□□□□ 0.21
PRAME-204ENST00000403441 CAPN15O75808 1086 aa16.33■□□□□ 0.2
PRAME-204ENST00000403441 HLFQ16534 295 aa16.33■□□□□ 0.2
PRAME-204ENST00000403441 KIF6Q6ZMV9 814 aa16.33■□□□□ 0.2
PRAME-204ENST00000403441 TAF1DQ9H5J8 278 aaPredicted RBP16.33■□□□□ 0.2
PRAME-204ENST00000403441 MIS18AQ9NYP9 233 aa16.33■□□□□ 0.2
PRAME-204ENST00000403441 MKRN1Q9UHC7 482 aaKnown RBP16.33■□□□□ 0.2
PRAME-204ENST00000403441 KDM3BQ7LBC6 1761 aa16.32■□□□□ 0.2
PRAME-204ENST00000403441 ZNF541Q9H0D2 1346 aa16.32■□□□□ 0.2
PRAME-204ENST00000403441 ERVV-1B6SEH8 477 aa16.31■□□□□ 0.2
PRAME-204ENST00000403441 IARSP41252 1262 aaKnown RBP16.31■□□□□ 0.2
PRAME-204ENST00000403441 EAPPQ56P03 285 aaPredicted RBP16.31■□□□□ 0.2
PRAME-204ENST00000403441 OLFM4Q6UX06 510 aa16.31■□□□□ 0.2
PRAME-204ENST00000403441 NGEFQ8N5V2 710 aa16.31■□□□□ 0.2
PRAME-204ENST00000403441 HACL1Q9UJ83 578 aa16.31■□□□□ 0.2
PRAME-204ENST00000403441 CNTNAP1P78357 1384 aa16.3■□□□□ 0.2
PRAME-204ENST00000403441 ABCC12Q96J65 1359 aa16.3■□□□□ 0.2
PRAME-204ENST00000403441 MAP3K15Q6ZN16 1313 aa16.3■□□□□ 0.2
PRAME-204ENST00000403441 PASKQ96RG2 1323 aa16.3■□□□□ 0.2
PRAME-204ENST00000403441 CRY2Q49AN0 593 aa16.3■□□□□ 0.2
PRAME-204ENST00000403441 DLG5Q8TDM6 1919 aa16.29■□□□□ 0.2
PRAME-204ENST00000403441 IBTKQ9P2D0 1353 aaPredicted RBP16.29■□□□□ 0.2
PRAME-204ENST00000403441 MAPK8IP3Q9UPT6 1336 aa16.29■□□□□ 0.2
PRAME-204ENST00000403441 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
PRAME-204ENST00000403441 SYNE4Q8N205 404 aa16.29■□□□□ 0.2
PRAME-204ENST00000403441 JDP2Q8WYK2 163 aa16.29■□□□□ 0.2
PRAME-204ENST00000403441 RPGRQ92834 1020 aaKnown RBP16.29■□□□□ 0.2
PRAME-204ENST00000403441 PSMD1Q99460 953 aa16.29■□□□□ 0.2
PRAME-204ENST00000403441 PNNQ9H307 717 aaKnown RBP16.29■□□□□ 0.2
PRAME-204ENST00000403441 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
PRAME-204ENST00000403441 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
PRAME-204ENST00000403441 MYL6BP14649 208 aa16.28■□□□□ 0.2
PRAME-204ENST00000403441 EPHX2P34913 555 aa16.28■□□□□ 0.2
PRAME-204ENST00000403441 NFE2L2Q16236 605 aa16.28■□□□□ 0.2
PRAME-204ENST00000403441 CC2D2BQ6DHV5 1058 aa16.28■□□□□ 0.2
PRAME-204ENST00000403441 NUTM1Q86Y26 1132 aa16.28■□□□□ 0.2
PRAME-204ENST00000403441 GPC2Q8N158 579 aa16.28■□□□□ 0.2
PRAME-204ENST00000403441 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
PRAME-204ENST00000403441 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
PRAME-204ENST00000403441 NUP98P52948 1817 aa16.27■□□□□ 0.2
PRAME-204ENST00000403441 TMEM88BA6NKF7 163 aa16.27■□□□□ 0.2
PRAME-204ENST00000403441 FZD9O00144 591 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms