RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 CPDO75976 1380 aa20.63■□□□□ 0.89
DNMT3A-205ENST00000402667 BAG4O95429 457 aaKnown RBP20.62■□□□□ 0.89
DNMT3A-205ENST00000402667 SKOR2Q2VWA4 1001 aaPredicted RBP20.62■□□□□ 0.89
DNMT3A-205ENST00000402667 ERC1Q8IUD2 1116 aa20.62■□□□□ 0.89
DNMT3A-205ENST00000402667 XAGE3Q8WTP9 111 aa20.62■□□□□ 0.89
DNMT3A-205ENST00000402667 GLRX3O76003 335 aaKnown RBP20.62■□□□□ 0.89
DNMT3A-205ENST00000402667 MCM2P49736 904 aa20.62■□□□□ 0.89
DNMT3A-205ENST00000402667 COPS6Q7L5N1 327 aa20.62■□□□□ 0.89
DNMT3A-205ENST00000402667 BICC1Q9H694 974 aaKnown RBP20.62■□□□□ 0.89
DNMT3A-205ENST00000402667 SGSM2O43147 1006 aa20.61■□□□□ 0.89
DNMT3A-205ENST00000402667 SNRPA1P09661 255 aaKnown RBP20.61■□□□□ 0.89
DNMT3A-205ENST00000402667 PKP1Q13835 747 aa20.61■□□□□ 0.89
DNMT3A-205ENST00000402667 TTC5Q8N0Z6 440 aa20.61■□□□□ 0.89
DNMT3A-205ENST00000402667 TMX3Q96JJ7 454 aa20.61■□□□□ 0.89
DNMT3A-205ENST00000402667 USP16Q9Y5T5 823 aa20.61■□□□□ 0.89
DNMT3A-205ENST00000402667 RTN4Q9NQC3 1192 aaKnown RBP20.61■□□□□ 0.89
DNMT3A-205ENST00000402667 HSPA4P34932 840 aa20.6■□□□□ 0.89
DNMT3A-205ENST00000402667 NEXNQ0ZGT2 675 aa20.6■□□□□ 0.89
DNMT3A-205ENST00000402667 MRC1P22897 1456 aa20.6■□□□□ 0.89
DNMT3A-205ENST00000402667 NEURL1BA8MQ27 555 aa20.6■□□□□ 0.89
DNMT3A-205ENST00000402667 GOLGA6L22H0YM25 854 aa20.6■□□□□ 0.89
DNMT3A-205ENST00000402667 BRINP3Q76B58 766 aa20.6■□□□□ 0.89
DNMT3A-205ENST00000402667 LRP10Q7Z4F1 713 aa20.6■□□□□ 0.89
DNMT3A-205ENST00000402667 XRCC6P12956 609 aaKnown RBP eCLIP20.59■□□□□ 0.89
DNMT3A-205ENST00000402667 ARXQ96QS3 562 aa20.59■□□□□ 0.89
DNMT3A-205ENST00000402667 METTL22Q9BUU2 404 aaPredicted RBP20.59■□□□□ 0.89
DNMT3A-205ENST00000402667 ECHDC1Q9NTX5 307 aa20.59■□□□□ 0.89
DNMT3A-205ENST00000402667 PKD1L3Q7Z443 1732 aa20.59■□□□□ 0.89
DNMT3A-205ENST00000402667 FMNL2Q96PY5 1086 aa20.59■□□□□ 0.89
DNMT3A-205ENST00000402667 IFIT2P09913 472 aaKnown RBP20.58■□□□□ 0.89
DNMT3A-205ENST00000402667 CABP4P57796 275 aa20.58■□□□□ 0.89
DNMT3A-205ENST00000402667 GCKRQ14397 625 aa20.58■□□□□ 0.89
DNMT3A-205ENST00000402667 MYD88Q99836 296 aa20.58■□□□□ 0.89
DNMT3A-205ENST00000402667 SASH1O94885 1247 aa20.58■□□□□ 0.88
DNMT3A-205ENST00000402667 ANKRD13DQ6ZTN6 518 aa20.58■□□□□ 0.88
DNMT3A-205ENST00000402667 PIP4K2AP48426 406 aaPredicted RBP20.57■□□□□ 0.88
DNMT3A-205ENST00000402667 G3BP1Q13283 466 aaKnown RBP eCLIP20.57■□□□□ 0.884e-6■□□□□ 9.2
DNMT3A-205ENST00000402667 RAD50Q92878 1312 aa20.57■□□□□ 0.88
DNMT3A-205ENST00000402667 CUL4AQ13619 759 aa20.56■□□□□ 0.88
DNMT3A-205ENST00000402667 CWC27Q6UX04 472 aaKnown RBP20.56■□□□□ 0.88
DNMT3A-205ENST00000402667 AACSQ86V21 672 aa20.56■□□□□ 0.88
DNMT3A-205ENST00000402667 GPATCH3Q96I76 525 aa20.56■□□□□ 0.88
DNMT3A-205ENST00000402667 UPF3BQ9BZI7 483 aaKnown RBP20.56■□□□□ 0.88
DNMT3A-205ENST00000402667 LSG1Q9H089 658 aaKnown RBP20.56■□□□□ 0.88
DNMT3A-205ENST00000402667 ZDHHC9Q9Y397 364 aa20.56■□□□□ 0.88
DNMT3A-205ENST00000402667 XIRP1Q702N8 1843 aaKnown RBP20.56■□□□□ 0.88
DNMT3A-205ENST00000402667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.56■□□□□ 0.88
DNMT3A-205ENST00000402667 EPHA10Q5JZY3 1008 aa20.54■□□□□ 0.88
DNMT3A-205ENST00000402667 MCTP1Q6DN14 999 aa20.54■□□□□ 0.88
DNMT3A-205ENST00000402667 EAF2Q96CJ1 260 aaPredicted RBP20.54■□□□□ 0.88
DNMT3A-205ENST00000402667 KIAA1211Q6ZU35 1233 aa20.54■□□□□ 0.88
DNMT3A-205ENST00000402667 NOL8Q76FK4 1167 aaKnown RBP20.54■□□□□ 0.88
DNMT3A-205ENST00000402667 PRDM11Q9NQV5 511 aa20.54■□□□□ 0.88
DNMT3A-205ENST00000402667 DIAPH3Q9NSV4 1193 aa20.54■□□□□ 0.88
DNMT3A-205ENST00000402667 MRE11P49959 708 aa20.53■□□□□ 0.88
DNMT3A-205ENST00000402667 WDR17Q8IZU2 1322 aa20.53■□□□□ 0.88
DNMT3A-205ENST00000402667 INTS4Q96HW7 963 aaKnown RBP20.53■□□□□ 0.88
DNMT3A-205ENST00000402667 SIL1Q9H173 461 aa20.53■□□□□ 0.88
DNMT3A-205ENST00000402667 ISY1Q9ULR0 285 aaKnown RBP20.53■□□□□ 0.88
DNMT3A-205ENST00000402667 SNX14Q9Y5W7 946 aa20.53■□□□□ 0.88
DNMT3A-205ENST00000402667 KLHL40Q2TBA0 621 aa20.52■□□□□ 0.88
DNMT3A-205ENST00000402667 TOM1L2Q6ZVM7 507 aa20.52■□□□□ 0.88
DNMT3A-205ENST00000402667 KLHDC4Q8TBB5 520 aa20.52■□□□□ 0.88
DNMT3A-205ENST00000402667 RUFY2Q8WXA3 655 aa20.52■□□□□ 0.88
DNMT3A-205ENST00000402667 EVI5LQ96CN4 794 aa20.52■□□□□ 0.88
DNMT3A-205ENST00000402667 CCDC8Q9H0W5 538 aaPredicted RBP20.52■□□□□ 0.88
DNMT3A-205ENST00000402667 DDX49Q9Y6V7 483 aaKnown RBP20.52■□□□□ 0.88
DNMT3A-205ENST00000402667 ZCRB1Q8TBF4 217 aaKnown RBP20.52■□□□□ 0.87
DNMT3A-205ENST00000402667 SOS2Q07890 1332 aaPredicted RBP20.51■□□□□ 0.87
DNMT3A-205ENST00000402667 RASEFQ8IZ41 740 aa20.5■□□□□ 0.87
DNMT3A-205ENST00000402667 JARID2Q92833 1246 aaPredicted RBP20.5■□□□□ 0.87
DNMT3A-205ENST00000402667 PANK2Q9BZ23 570 aa20.5■□□□□ 0.87
DNMT3A-205ENST00000402667 GRPEL1Q9HAV7 217 aa20.5■□□□□ 0.87
DNMT3A-205ENST00000402667 LMBRD1Q9NUN5 540 aa20.5■□□□□ 0.87
DNMT3A-205ENST00000402667 SLAIN2Q9P270 581 aa20.5■□□□□ 0.87
DNMT3A-205ENST00000402667 PCDH11XQ9BZA7 1347 aa20.5■□□□□ 0.87
DNMT3A-205ENST00000402667 PCDH11YQ9BZA8 1340 aa20.5■□□□□ 0.87
DNMT3A-205ENST00000402667 GAS2L3Q86XJ1 694 aa20.49■□□□□ 0.87
DNMT3A-205ENST00000402667 TLR7Q9NYK1 1049 aaKnown RBP20.49■□□□□ 0.87
DNMT3A-205ENST00000402667 PARP4Q9UKK3 1724 aaKnown RBP20.49■□□□□ 0.87
DNMT3A-205ENST00000402667 GLI3P10071 1580 aa20.48■□□□□ 0.87
DNMT3A-205ENST00000402667 ATP5J2-PTCD1G3V325 749 aa20.48■□□□□ 0.87
DNMT3A-205ENST00000402667 PTCD1O75127 700 aaKnown RBP20.48■□□□□ 0.87
DNMT3A-205ENST00000402667 PLBD2Q8NHP8 589 aa20.48■□□□□ 0.87
DNMT3A-205ENST00000402667 PTH1RQ03431 593 aa20.48■□□□□ 0.87
DNMT3A-205ENST00000402667 UBE3BQ7Z3V4 1068 aa20.48■□□□□ 0.87
DNMT3A-205ENST00000402667 COPRSQ9NQ92 184 aa20.48■□□□□ 0.87
DNMT3A-205ENST00000402667 BRD1O95696 1058 aa20.47■□□□□ 0.87
DNMT3A-205ENST00000402667 RFX5P48382 616 aaPredicted RBP20.47■□□□□ 0.87
DNMT3A-205ENST00000402667 TTC14Q96N46 770 aa20.47■□□□□ 0.87
DNMT3A-205ENST00000402667 NBPF26B4DH59 902 aa20.47■□□□□ 0.87
DNMT3A-205ENST00000402667 RABL6Q3YEC7 729 aaPredicted RBP20.47■□□□□ 0.87
DNMT3A-205ENST00000402667 NBPF14Q5TI25 921 aa20.47■□□□□ 0.87
DNMT3A-205ENST00000402667 NBPF10Q6P3W6 841 aaKnown RBP20.47■□□□□ 0.87
DNMT3A-205ENST00000402667 NBPF15Q8N660 670 aa20.47■□□□□ 0.87
DNMT3A-205ENST00000402667 COL5A2P05997 1499 aaPredicted RBP20.46■□□□□ 0.87
DNMT3A-205ENST00000402667 A0A087WZG4 1122 aa20.46■□□□□ 0.87
DNMT3A-205ENST00000402667 ERVV-2B6SEH9 535 aa20.46■□□□□ 0.87
DNMT3A-205ENST00000402667 COL15A1P39059 1388 aa20.46■□□□□ 0.87
DNMT3A-205ENST00000402667 ARFGEF2Q9Y6D5 1785 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms