RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 RHPN1Q8TCX5 695 aa11.36□□□□□ -0.59
CBX1-203ENST00000402583 RILPL2Q969X0 211 aa11.36□□□□□ -0.59
CBX1-203ENST00000402583 GPATCH3Q96I76 525 aa11.36□□□□□ -0.59
CBX1-203ENST00000402583 ESYT1Q9BSJ8 1104 aa11.36□□□□□ -0.59
CBX1-203ENST00000402583 CWC22Q9HCG8 908 aaKnown RBP11.36□□□□□ -0.59
CBX1-203ENST00000402583 TTC41PQ6P2S7 1318 aa11.35□□□□□ -0.59
CBX1-203ENST00000402583 GOLGA6L22H0YM25 854 aa11.35□□□□□ -0.59
CBX1-203ENST00000402583 NBPF7P0C2Y1 421 aaPredicted RBP11.35□□□□□ -0.59
CBX1-203ENST00000402583 CHMLP26374 656 aa11.35□□□□□ -0.59
CBX1-203ENST00000402583 NUCB2P80303 420 aa11.35□□□□□ -0.59
CBX1-203ENST00000402583 LARP1Q6PKG0 1096 aaKnown RBP11.35□□□□□ -0.59
CBX1-203ENST00000402583 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
CBX1-203ENST00000402583 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
CBX1-203ENST00000402583 RIC3Q7Z5B4 369 aa11.34□□□□□ -0.59
CBX1-203ENST00000402583 KDM6AO15550 1401 aaPredicted RBP11.34□□□□□ -0.59
CBX1-203ENST00000402583 UTYO14607 1347 aa11.34□□□□□ -0.59
CBX1-203ENST00000402583 USP42Q9H9J4 1324 aaKnown RBP11.34□□□□□ -0.59
CBX1-203ENST00000402583 SIPA1L3O60292 1781 aaPredicted RBP11.33□□□□□ -0.59
CBX1-203ENST00000402583 MRC1P22897 1456 aa11.33□□□□□ -0.6
CBX1-203ENST00000402583 GRM8O00222 908 aa11.33□□□□□ -0.6
CBX1-203ENST00000402583 GLRX3O76003 335 aaKnown RBP11.33□□□□□ -0.6
CBX1-203ENST00000402583 ANXA1P04083 346 aa11.33□□□□□ -0.6
CBX1-203ENST00000402583 SNRPA1P09661 255 aaKnown RBP11.33□□□□□ -0.6
CBX1-203ENST00000402583 CLASRPQ8N2M8 674 aaKnown RBP11.33□□□□□ -0.6
CBX1-203ENST00000402583 TNPO1Q92973 898 aaKnown RBP11.33□□□□□ -0.6
CBX1-203ENST00000402583 FMNL2Q96PY5 1086 aa11.33□□□□□ -0.6
CBX1-203ENST00000402583 IL1RAPL2Q9NP60 686 aa11.33□□□□□ -0.6
CBX1-203ENST00000402583 MEGF6O75095 1541 aa11.33□□□□□ -0.6
CBX1-203ENST00000402583 COL18A1P39060 1754 aa11.32□□□□□ -0.6
CBX1-203ENST00000402583 TRAK2O60296 914 aa11.32□□□□□ -0.6
CBX1-203ENST00000402583 CD2BP2O95400 341 aaKnown RBP11.32□□□□□ -0.6
CBX1-203ENST00000402583 CABP4P57796 275 aa11.32□□□□□ -0.6
CBX1-203ENST00000402583 NUTM1Q86Y26 1132 aa11.32□□□□□ -0.6
CBX1-203ENST00000402583 NFATC2IPQ8NCF5 419 aa11.32□□□□□ -0.6
CBX1-203ENST00000402583 ANO2Q9NQ90 1003 aa11.32□□□□□ -0.6
CBX1-203ENST00000402583 ISY1Q9ULR0 285 aaKnown RBP11.32□□□□□ -0.6
CBX1-203ENST00000402583 IFIT2P09913 472 aaKnown RBP11.31□□□□□ -0.6
CBX1-203ENST00000402583 G3BP1Q13283 466 aaKnown RBP eCLIP11.31□□□□□ -0.6
CBX1-203ENST00000402583 PROSER3Q2NL68 480 aa11.31□□□□□ -0.6
CBX1-203ENST00000402583 TSHZ3Q63HK5 1081 aa11.31□□□□□ -0.6
CBX1-203ENST00000402583 CLEC17AQ6ZS10 378 aa11.31□□□□□ -0.6
CBX1-203ENST00000402583 KIAA1211Q6ZU35 1233 aa11.31□□□□□ -0.6
CBX1-203ENST00000402583 RUFY2Q8WXA3 655 aa11.31□□□□□ -0.6
CBX1-203ENST00000402583 IL17RAQ96F46 866 aa11.31□□□□□ -0.6
CBX1-203ENST00000402583 ERBB4Q15303 1308 aa11.31□□□□□ -0.6
CBX1-203ENST00000402583 PCDH11XQ9BZA7 1347 aa11.31□□□□□ -0.6
CBX1-203ENST00000402583 PCDH11YQ9BZA8 1340 aa11.31□□□□□ -0.6
CBX1-203ENST00000402583 GOLGA6L3A6NEY3 463 aa11.3□□□□□ -0.6
CBX1-203ENST00000402583 PYGBP11216 843 aa11.3□□□□□ -0.6
CBX1-203ENST00000402583 AIMP1Q12904 312 aaKnown RBP11.3□□□□□ -0.6
CBX1-203ENST00000402583 PDIA6Q15084 440 aa11.3□□□□□ -0.6
CBX1-203ENST00000402583 CHRNA2Q15822 529 aa11.3□□□□□ -0.6
CBX1-203ENST00000402583 BRINP3Q76B58 766 aa11.3□□□□□ -0.6
CBX1-203ENST00000402583 PI4K2BQ8TCG2 481 aa11.3□□□□□ -0.6
CBX1-203ENST00000402583 CABLES1Q8TDN4 633 aa11.3□□□□□ -0.6
CBX1-203ENST00000402583 DDX17Q92841 729 aaKnown RBP11.3□□□□□ -0.6
CBX1-203ENST00000402583 METTL22Q9BUU2 404 aaPredicted RBP11.3□□□□□ -0.6
CBX1-203ENST00000402583 PRDM11Q9NQV5 511 aa11.3□□□□□ -0.6
CBX1-203ENST00000402583 ECHDC1Q9NTX5 307 aa11.3□□□□□ -0.6
CBX1-203ENST00000402583 STRCP1A6NGW2 1772 aa11.3□□□□□ -0.6
CBX1-203ENST00000402583 WDR17Q8IZU2 1322 aa11.3□□□□□ -0.6
CBX1-203ENST00000402583 PKD1L3Q7Z443 1732 aa11.29□□□□□ -0.6
CBX1-203ENST00000402583 SCN11AQ9UI33 1791 aa11.29□□□□□ -0.6
CBX1-203ENST00000402583 PRAMEF22A3QJZ6 481 aa11.29□□□□□ -0.6
CBX1-203ENST00000402583 HIP1O00291 1037 aa11.29□□□□□ -0.6
CBX1-203ENST00000402583 NEK4P51957 841 aa11.29□□□□□ -0.6
CBX1-203ENST00000402583 SLC39A6Q13433 755 aa11.29□□□□□ -0.6
CBX1-203ENST00000402583 CWF19L2Q2TBE0 894 aaKnown RBP11.29□□□□□ -0.6
CBX1-203ENST00000402583 ANKRD13DQ6ZTN6 518 aa11.29□□□□□ -0.6
CBX1-203ENST00000402583 XAGE3Q8WTP9 111 aa11.29□□□□□ -0.6
CBX1-203ENST00000402583 RNF25Q96BH1 459 aaPredicted RBP11.29□□□□□ -0.6
CBX1-203ENST00000402583 ZNF496Q96IT1 587 aaPredicted RBP11.29□□□□□ -0.6
CBX1-203ENST00000402583 NEURL1BA8MQ27 555 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 ERVV-2B6SEH9 535 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 CYP27B1O15528 508 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 MYL6BP14649 208 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 HSPA2P54652 639 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 GCKRQ14397 625 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 TOM1L2Q6ZVM7 507 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 COPS6Q7L5N1 327 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 EVI5LQ96CN4 794 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 DIAPH3Q9NSV4 1193 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 PARP4Q9UKK3 1724 aaKnown RBP11.28□□□□□ -0.6
CBX1-203ENST00000402583 CRYBG1Q9Y4K1 1723 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 SOS2Q07890 1332 aaPredicted RBP11.28□□□□□ -0.6
CBX1-203ENST00000402583 RGPD5Q99666 1765 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 COL15A1P39059 1388 aa11.28□□□□□ -0.6
CBX1-203ENST00000402583 RIOK3O14730 519 aaKnown RBP11.27□□□□□ -0.61
CBX1-203ENST00000402583 SGSM2O43147 1006 aa11.27□□□□□ -0.61
CBX1-203ENST00000402583 HSPA4P34932 840 aa11.27□□□□□ -0.61
CBX1-203ENST00000402583 ZCRB1Q8TBF4 217 aaKnown RBP11.27□□□□□ -0.61
CBX1-203ENST00000402583 INTS4Q96HW7 963 aaKnown RBP11.27□□□□□ -0.61
CBX1-203ENST00000402583 MYD88Q99836 296 aa11.27□□□□□ -0.61
CBX1-203ENST00000402583 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
CBX1-203ENST00000402583 SLAIN2Q9P270 581 aa11.27□□□□□ -0.61
CBX1-203ENST00000402583 TUBGCP6Q96RT7 1819 aa11.26□□□□□ -0.61
CBX1-203ENST00000402583 IGKV5-2P06315 115 aa11.26□□□□□ -0.61
CBX1-203ENST00000402583 SSFA2P28290 1259 aa11.26□□□□□ -0.61
CBX1-203ENST00000402583 AACSQ86V21 672 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms