RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 COL9A3Q14050 684 aaPredicted RBP13.39□□□□□ -0.27
SCFD2-202ENST00000401642 ADCK5Q3MIX3 580 aa13.39□□□□□ -0.27
SCFD2-202ENST00000401642 SNX14Q9Y5W7 946 aa13.39□□□□□ -0.27
SCFD2-202ENST00000401642 CYP2E1P05181 493 aaPredicted RBP13.38□□□□□ -0.27
SCFD2-202ENST00000401642 STK3Q13188 491 aa13.38□□□□□ -0.27
SCFD2-202ENST00000401642 FOSBP53539 338 aa13.38□□□□□ -0.27
SCFD2-202ENST00000401642 COPS6Q7L5N1 327 aa13.38□□□□□ -0.27
SCFD2-202ENST00000401642 FERMT3Q86UX7 667 aa13.38□□□□□ -0.27
SCFD2-202ENST00000401642 XAGE3Q8WTP9 111 aa13.38□□□□□ -0.27
SCFD2-202ENST00000401642 ADCY9O60503 1353 aa13.38□□□□□ -0.27
SCFD2-202ENST00000401642 SGSM2O43147 1006 aa13.38□□□□□ -0.27
SCFD2-202ENST00000401642 RAB11FIP3O75154 756 aa13.38□□□□□ -0.27
SCFD2-202ENST00000401642 LARGE1O95461 756 aa13.38□□□□□ -0.27
SCFD2-202ENST00000401642 STAP2Q9UGK3 403 aa13.38□□□□□ -0.27
SCFD2-202ENST00000401642 PTMSP20962 102 aa13.37□□□□□ -0.27
SCFD2-202ENST00000401642 KSR2Q6VAB6 950 aa13.37□□□□□ -0.27
SCFD2-202ENST00000401642 ARHGEF25Q86VW2 580 aa13.37□□□□□ -0.27
SCFD2-202ENST00000401642 FSD1Q9BTV5 496 aa13.37□□□□□ -0.27
SCFD2-202ENST00000401642 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
SCFD2-202ENST00000401642 CNPY2Q9Y2B0 182 aa13.37□□□□□ -0.27
SCFD2-202ENST00000401642 CCDC85AQ96PX6 553 aaPredicted RBP13.36□□□□□ -0.27
SCFD2-202ENST00000401642 SMC3Q9UQE7 1217 aa13.36□□□□□ -0.27
SCFD2-202ENST00000401642 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
SCFD2-202ENST00000401642 PTMAP06454 111 aaKnown RBP13.36□□□□□ -0.27
SCFD2-202ENST00000401642 POLA2Q14181 598 aa13.36□□□□□ -0.27
SCFD2-202ENST00000401642 FAM173BQ6P4H8 233 aa13.36□□□□□ -0.27
SCFD2-202ENST00000401642 USP48Q86UV5 1035 aa13.36□□□□□ -0.27
SCFD2-202ENST00000401642 EAF2Q96CJ1 260 aaPredicted RBP13.36□□□□□ -0.27
SCFD2-202ENST00000401642 DNAJC2Q99543 621 aaKnown RBP13.36□□□□□ -0.27
SCFD2-202ENST00000401642 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
SCFD2-202ENST00000401642 GRM8O00222 908 aa13.36□□□□□ -0.27
SCFD2-202ENST00000401642 HSPA4P34932 840 aa13.36□□□□□ -0.27
SCFD2-202ENST00000401642 ARID3AQ99856 593 aa13.36□□□□□ -0.27
SCFD2-202ENST00000401642 ECHDC1Q9NTX5 307 aa13.36□□□□□ -0.27
SCFD2-202ENST00000401642 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
SCFD2-202ENST00000401642 MSNP26038 577 aaKnown RBP13.35□□□□□ -0.27
SCFD2-202ENST00000401642 ZNF496Q96IT1 587 aaPredicted RBP13.35□□□□□ -0.27
SCFD2-202ENST00000401642 EPHA10Q5JZY3 1008 aa13.35□□□□□ -0.27
SCFD2-202ENST00000401642 RUFY3Q7L099 469 aa13.35□□□□□ -0.27
SCFD2-202ENST00000401642 UBE3BQ7Z3V4 1068 aa13.35□□□□□ -0.27
SCFD2-202ENST00000401642 PXDNQ92626 1479 aa13.35□□□□□ -0.27
SCFD2-202ENST00000401642 A0A0G2JS52 829 aa13.34□□□□□ -0.27
SCFD2-202ENST00000401642 SLFNL1Q499Z3 407 aa13.34□□□□□ -0.27
SCFD2-202ENST00000401642 AMOTQ4VCS5 1084 aa13.34□□□□□ -0.27
SCFD2-202ENST00000401642 TTC5Q8N0Z6 440 aa13.34□□□□□ -0.27
SCFD2-202ENST00000401642 GPATCH3Q96I76 525 aa13.34□□□□□ -0.27
SCFD2-202ENST00000401642 LSG1Q9H089 658 aaKnown RBP13.34□□□□□ -0.27
SCFD2-202ENST00000401642 BRD1O95696 1058 aa13.34□□□□□ -0.27
SCFD2-202ENST00000401642 NEXNQ0ZGT2 675 aa13.34□□□□□ -0.27
SCFD2-202ENST00000401642 NMIQ13287 307 aaPredicted RBP13.34□□□□□ -0.27
SCFD2-202ENST00000401642 PDRG1Q9NUG6 133 aa13.34□□□□□ -0.27
SCFD2-202ENST00000401642 TAF6LQ9Y6J9 622 aa13.34□□□□□ -0.27
SCFD2-202ENST00000401642 DDX58O95786 925 aaKnown RBP13.34□□□□□ -0.27
SCFD2-202ENST00000401642 MCM2P49736 904 aa13.34□□□□□ -0.27
SCFD2-202ENST00000401642 HSP90AB4PQ58FF6 505 aa13.34□□□□□ -0.27
SCFD2-202ENST00000401642 SASH1O94885 1247 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 CLCN1P35523 988 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 ZNF790Q6PG37 636 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 NEUROD6Q96NK8 337 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 LRRC2Q9BYS8 371 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 RAD50Q92878 1312 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 CEMIPQ8WUJ3 1361 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 ATF3P18847 181 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 CCDC173Q0VFZ6 552 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 CCDC129Q6ZRS4 1044 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 TOPAZ1Q8N9V7 1692 aa13.33□□□□□ -0.28
SCFD2-202ENST00000401642 KLHL34Q8N239 644 aa13.32□□□□□ -0.28
SCFD2-202ENST00000401642 KAZALD1Q96I82 304 aa13.32□□□□□ -0.28
SCFD2-202ENST00000401642 IGKV5-2P06315 115 aa13.32□□□□□ -0.28
SCFD2-202ENST00000401642 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
SCFD2-202ENST00000401642 SYT1P21579 422 aa13.32□□□□□ -0.28
SCFD2-202ENST00000401642 LIMCH1Q9UPQ0 1083 aa13.32□□□□□ -0.28
SCFD2-202ENST00000401642 RBM8AQ9Y5S9 174 aaKnown RBP13.32□□□□□ -0.28
SCFD2-202ENST00000401642 ARHGAP23Q9P227 1491 aa13.32□□□□□ -0.28
SCFD2-202ENST00000401642 GJB2P29033 226 aa13.32□□□□□ -0.28
SCFD2-202ENST00000401642 ZNF830Q96NB3 372 aaPredicted RBP13.32□□□□□ -0.28
SCFD2-202ENST00000401642 NWD1Q149M9 1564 aa13.31□□□□□ -0.28
SCFD2-202ENST00000401642 A0A0D9SFI3 127 aa13.31□□□□□ -0.28
SCFD2-202ENST00000401642 HSPA2P54652 639 aa13.31□□□□□ -0.28
SCFD2-202ENST00000401642 ANAPC15P60006 121 aa13.31□□□□□ -0.28
SCFD2-202ENST00000401642 LINS1Q8NG48 757 aa13.31□□□□□ -0.28
SCFD2-202ENST00000401642 RUFY2Q8WXA3 655 aa13.31□□□□□ -0.28
SCFD2-202ENST00000401642 HYPKQ9NX55 129 aa13.31□□□□□ -0.28
SCFD2-202ENST00000401642 ANKARQ7Z5J8 1434 aa13.31□□□□□ -0.28
SCFD2-202ENST00000401642 ZKSCAN1P17029 563 aaPredicted RBP13.31□□□□□ -0.28
SCFD2-202ENST00000401642 DNM1Q05193 864 aaKnown RBP13.31□□□□□ -0.28
SCFD2-202ENST00000401642 CUL4AQ13619 759 aa13.31□□□□□ -0.28
SCFD2-202ENST00000401642 SEC62Q99442 399 aaKnown RBP13.31□□□□□ -0.28
SCFD2-202ENST00000401642 WDR33Q9C0J8 1336 aaKnown RBP13.3□□□□□ -0.28
SCFD2-202ENST00000401642 DDX46Q7L014 1031 aaKnown RBP13.3□□□□□ -0.28
SCFD2-202ENST00000401642 DDX21Q9NR30 783 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCFD2-202ENST00000401642 CYP46A1Q9Y6A2 500 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 SLIT1O75093 1534 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 FMN2Q9NZ56 1722 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 A0A087WZG4 1122 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 STX6O43752 255 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 ZNF445P59923 1031 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 BABAM1Q9NWV8 329 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 ISY1Q9ULR0 285 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms