RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 NOL7Q9UMY1 257 aaKnown RBP17.02■□□□□ 0.31
GABPA-202ENST00000400075 ZHX3Q9H4I2 956 aa17.01■□□□□ 0.31
GABPA-202ENST00000400075 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
GABPA-202ENST00000400075 TNIP1Q15025 636 aa17.01■□□□□ 0.31
GABPA-202ENST00000400075 BEGAINQ9BUH8 593 aa17.01■□□□□ 0.31
GABPA-202ENST00000400075 GOLIM4O00461 696 aa17■□□□□ 0.31
GABPA-202ENST00000400075 EIF6P56537 245 aaKnown RBP17■□□□□ 0.31
GABPA-202ENST00000400075 JMYQ8N9B5 988 aa17■□□□□ 0.31
GABPA-202ENST00000400075 CERKQ8TCT0 537 aa17■□□□□ 0.31
GABPA-202ENST00000400075 ANKRD2Q9GZV1 360 aa17■□□□□ 0.31
GABPA-202ENST00000400075 STK38Q15208 465 aa17■□□□□ 0.31
GABPA-202ENST00000400075 CRNKL1Q9BZJ0 848 aaKnown RBP17■□□□□ 0.31
GABPA-202ENST00000400075 SH3TC1Q8TE82 1336 aa17■□□□□ 0.31
GABPA-202ENST00000400075 RABEP1Q15276 862 aa17■□□□□ 0.31
GABPA-202ENST00000400075 COL17A1Q9UMD9 1497 aaPredicted RBP16.99■□□□□ 0.31
GABPA-202ENST00000400075 TRIM37O94972 964 aa16.99■□□□□ 0.31
GABPA-202ENST00000400075 ECHDC1Q9NTX5 307 aa16.99■□□□□ 0.31
GABPA-202ENST00000400075 BCS1LQ9Y276 419 aa16.99■□□□□ 0.31
GABPA-202ENST00000400075 EFCAB6Q5THR3 1501 aa16.99■□□□□ 0.31
GABPA-202ENST00000400075 MAST1Q9Y2H9 1570 aa16.99■□□□□ 0.31
GABPA-202ENST00000400075 PDE4BQ07343 736 aa16.99■□□□□ 0.31
GABPA-202ENST00000400075 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
GABPA-202ENST00000400075 LARGE2Q8N3Y3 721 aa16.99■□□□□ 0.31
GABPA-202ENST00000400075 JAKMIP1Q96N16 626 aaKnown RBP16.99■□□□□ 0.31
GABPA-202ENST00000400075 ZNF213O14771 459 aa16.99■□□□□ 0.31
GABPA-202ENST00000400075 OFD1O75665 1012 aa16.99■□□□□ 0.31
GABPA-202ENST00000400075 NLRP1Q9C000 1473 aa16.99■□□□□ 0.31
GABPA-202ENST00000400075 SMARCA5O60264 1052 aaPredicted RBP16.99■□□□□ 0.31
GABPA-202ENST00000400075 DDX21Q9NR30 783 aaKnown RBP eCLIP16.98■□□□□ 0.31
GABPA-202ENST00000400075 SSBP05455 408 aaKnown RBP eCLIP16.98■□□□□ 0.31
GABPA-202ENST00000400075 CUL5Q93034 780 aa16.98■□□□□ 0.31
GABPA-202ENST00000400075 CARD14Q9BXL6 1004 aa16.98■□□□□ 0.31
GABPA-202ENST00000400075 ABCA8O94911 1581 aa16.98■□□□□ 0.31
GABPA-202ENST00000400075 CCDC196A0A1B0GTZ2 297 aa16.98■□□□□ 0.31
GABPA-202ENST00000400075 IL15P40933 162 aaPredicted RBP16.98■□□□□ 0.31
GABPA-202ENST00000400075 CT47A1Q5JQC4 288 aaPredicted RBP16.98■□□□□ 0.31
GABPA-202ENST00000400075 SCLT1Q96NL6 688 aa16.98■□□□□ 0.31
GABPA-202ENST00000400075 ZFYVE9O95405 1425 aa16.97■□□□□ 0.31
GABPA-202ENST00000400075 WASF1Q92558 559 aa16.97■□□□□ 0.31
GABPA-202ENST00000400075 ZNF396Q96N95 335 aaPredicted RBP16.97■□□□□ 0.31
GABPA-202ENST00000400075 CHMP5Q9NZZ3 219 aa16.97■□□□□ 0.31
GABPA-202ENST00000400075 BMP2KQ9NSY1 1161 aaPredicted RBP16.97■□□□□ 0.31
GABPA-202ENST00000400075 TSPY2A6NKD2 308 aa16.97■□□□□ 0.31
GABPA-202ENST00000400075 TRIM27P14373 513 aa16.97■□□□□ 0.31
GABPA-202ENST00000400075 PAF1Q8N7H5 531 aa16.97■□□□□ 0.31
GABPA-202ENST00000400075 ASXL1Q8IXJ9 1541 aa16.97■□□□□ 0.31
GABPA-202ENST00000400075 SASS6Q6UVJ0 657 aa16.96■□□□□ 0.31
GABPA-202ENST00000400075 ADGRL2O95490 1459 aa16.96■□□□□ 0.31
GABPA-202ENST00000400075 SKOR2Q2VWA4 1001 aaPredicted RBP16.96■□□□□ 0.31
GABPA-202ENST00000400075 MSL1Q68DK7 614 aa16.96■□□□□ 0.31
GABPA-202ENST00000400075 ZNF408Q9H9D4 720 aa16.96■□□□□ 0.31
GABPA-202ENST00000400075 TNNI2P48788 182 aa16.96■□□□□ 0.31
GABPA-202ENST00000400075 HELBQ8NG08 1087 aaPredicted RBP16.96■□□□□ 0.31
GABPA-202ENST00000400075 CYP7A1P22680 504 aa16.95■□□□□ 0.3
GABPA-202ENST00000400075 NAA16Q6N069 864 aaPredicted RBP16.95■□□□□ 0.3
GABPA-202ENST00000400075 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
GABPA-202ENST00000400075 DNMT1P26358 1616 aaKnown RBP16.95■□□□□ 0.3
GABPA-202ENST00000400075 SLC52A2Q9HAB3 445 aa16.95■□□□□ 0.3
GABPA-202ENST00000400075 A1BGP04217 495 aa16.95■□□□□ 0.3
GABPA-202ENST00000400075 ODF2Q5BJF6 829 aa16.95■□□□□ 0.3
GABPA-202ENST00000400075 C8orf58Q8NAV2 365 aa16.95■□□□□ 0.3
GABPA-202ENST00000400075 SAMD9Q5K651 1589 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 KIAA0232Q92628 1395 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 GOLGA6L3A6NEY3 463 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 ERVV-2B6SEH9 535 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 OLFM4Q6UX06 510 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 EIF2AK4Q9P2K8 1649 aaKnown RBP16.94■□□□□ 0.3
GABPA-202ENST00000400075 UNC5CLQ8IV45 518 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 PDRG1Q9NUG6 133 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 PICALMQ13492 652 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 DPY19L2Q6NUT2 758 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 UFL1O94874 794 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 PDE6BP35913 854 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 SLC4A8Q2Y0W8 1093 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 DPP8Q6V1X1 898 aaPredicted RBP16.94■□□□□ 0.3
GABPA-202ENST00000400075 FAM89AQ96GI7 184 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 MPHOSPH6Q99547 160 aaKnown RBP16.94■□□□□ 0.3
GABPA-202ENST00000400075 MYO5CQ9NQX4 1742 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 STX8Q9UNK0 236 aa16.94■□□□□ 0.3
GABPA-202ENST00000400075 METP08581 1390 aa16.93■□□□□ 0.3
GABPA-202ENST00000400075 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
GABPA-202ENST00000400075 SUPT20HQ8NEM7 779 aa16.93■□□□□ 0.3
GABPA-202ENST00000400075 NKTRP30414 1462 aaKnown RBP16.93■□□□□ 0.3
GABPA-202ENST00000400075 HCLS1P14317 486 aaPredicted RBP16.93■□□□□ 0.3
GABPA-202ENST00000400075 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
GABPA-202ENST00000400075 KINO60870 393 aaKnown RBP16.93■□□□□ 0.3
GABPA-202ENST00000400075 PLCG2P16885 1265 aa16.93■□□□□ 0.3
GABPA-202ENST00000400075 CEBPZQ03701 1054 aaKnown RBP16.93■□□□□ 0.3
GABPA-202ENST00000400075 FAM182BQ5T319 152 aa16.93■□□□□ 0.3
GABPA-202ENST00000400075 PLEKHH1Q9ULM0 1364 aa16.92■□□□□ 0.3
GABPA-202ENST00000400075 EHMT1Q9H9B1 1298 aa16.92■□□□□ 0.3
GABPA-202ENST00000400075 CARD10Q9BWT7 1032 aa16.92■□□□□ 0.3
GABPA-202ENST00000400075 ALDH1B1P30837 517 aa16.92■□□□□ 0.3
GABPA-202ENST00000400075 CCDC82Q8N4S0 544 aa16.91■□□□□ 0.3
GABPA-202ENST00000400075 MAGI3Q5TCQ9 1506 aa16.91■□□□□ 0.3
GABPA-202ENST00000400075 CWF19L2Q2TBE0 894 aaKnown RBP16.91■□□□□ 0.3
GABPA-202ENST00000400075 PPP4R3BQ5MIZ7 849 aa16.91■□□□□ 0.3
GABPA-202ENST00000400075 CATIPQ7Z7H3 387 aa16.91■□□□□ 0.3
GABPA-202ENST00000400075 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms