RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 SPINK5Q9NQ38 1064 aaPredicted RBP9.67□□□□□ -0.86
USP16-204ENST00000399976 PTGER2P43116 358 aa9.66□□□□□ -0.86
USP16-204ENST00000399976 EXOSC9Q06265 439 aaKnown RBP9.66□□□□□ -0.86
USP16-204ENST00000399976 MIS18AQ9NYP9 233 aa9.66□□□□□ -0.86
USP16-204ENST00000399976 A0A1B0GUL6 1792 aa9.66□□□□□ -0.86
USP16-204ENST00000399976 KIF16BQ96L93 1317 aa9.66□□□□□ -0.86
USP16-204ENST00000399976 ZPR1O75312 459 aa9.66□□□□□ -0.86
USP16-204ENST00000399976 HNRNPUQ00839 825 aaKnown RBP eCLIP9.66□□□□□ -0.86
USP16-204ENST00000399976 ZNF34Q8IZ26 560 aa9.66□□□□□ -0.86
USP16-204ENST00000399976 BCL2L12Q9HB09 334 aa9.66□□□□□ -0.86
USP16-204ENST00000399976 CD2APQ9Y5K6 639 aa9.66□□□□□ -0.86
USP16-204ENST00000399976 TNRC6CQ9HCJ0 1690 aaKnown RBP9.66□□□□□ -0.86
USP16-204ENST00000399976 A1BGP04217 495 aa9.66□□□□□ -0.86
USP16-204ENST00000399976 HSP90B1P14625 803 aaKnown RBP9.66□□□□□ -0.86
USP16-204ENST00000399976 R3HDM1Q15032 1099 aaKnown RBP9.66□□□□□ -0.86
USP16-204ENST00000399976 DZIP3Q86Y13 1208 aaKnown RBP9.66□□□□□ -0.86
USP16-204ENST00000399976 KLRG2A4D1S0 409 aaPredicted RBP9.65□□□□□ -0.86
USP16-204ENST00000399976 POLD1P28340 1107 aa9.65□□□□□ -0.86
USP16-204ENST00000399976 TSR2Q969E8 191 aaKnown RBP9.65□□□□□ -0.86
USP16-204ENST00000399976 NYXQ9GZU5 481 aa9.65□□□□□ -0.86
USP16-204ENST00000399976 NPM2Q86SE8 214 aaKnown RBP9.65□□□□□ -0.87
USP16-204ENST00000399976 ISCA1Q9BUE6 129 aa9.65□□□□□ -0.87
USP16-204ENST00000399976 CHPF2Q9P2E5 772 aa9.65□□□□□ -0.87
USP16-204ENST00000399976 PRAMEF22A3QJZ6 481 aa9.64□□□□□ -0.87
USP16-204ENST00000399976 TSPYL6Q8N831 410 aa9.64□□□□□ -0.87
USP16-204ENST00000399976 LAS1LQ9Y4W2 734 aaKnown RBP9.64□□□□□ -0.87
USP16-204ENST00000399976 RTL9Q8NET4 1388 aa9.64□□□□□ -0.87
USP16-204ENST00000399976 SLC10A5Q5PT55 438 aa9.64□□□□□ -0.87
USP16-204ENST00000399976 KSR2Q6VAB6 950 aa9.64□□□□□ -0.87
USP16-204ENST00000399976 AMIGO3Q86WK7 504 aa9.64□□□□□ -0.87
USP16-204ENST00000399976 MRPL50Q8N5N7 158 aaKnown RBP9.64□□□□□ -0.87
USP16-204ENST00000399976 CDHR2Q9BYE9 1310 aa9.64□□□□□ -0.87
USP16-204ENST00000399976 ADCY9O60503 1353 aa9.64□□□□□ -0.87
USP16-204ENST00000399976 POLRMTO00411 1230 aaKnown RBP9.63□□□□□ -0.87
USP16-204ENST00000399976 DICER1Q9UPY3 1922 aaKnown RBP9.63□□□□□ -0.87
USP16-204ENST00000399976 LTBP1Q14766 1721 aa9.63□□□□□ -0.87
USP16-204ENST00000399976 TGFB2P61812 414 aa9.63□□□□□ -0.87
USP16-204ENST00000399976 TCIRG1Q13488 830 aa9.63□□□□□ -0.87
USP16-204ENST00000399976 UTYO14607 1347 aa9.63□□□□□ -0.87
USP16-204ENST00000399976 FER1L6Q2WGJ9 1857 aa9.63□□□□□ -0.87
USP16-204ENST00000399976 ALDH1L1O75891 902 aa9.63□□□□□ -0.87
USP16-204ENST00000399976 CANXP27824 592 aaKnown RBP9.63□□□□□ -0.87
USP16-204ENST00000399976 ANKRD13DQ6ZTN6 518 aa9.63□□□□□ -0.87
USP16-204ENST00000399976 CCDC191Q8NCU4 936 aa9.63□□□□□ -0.87
USP16-204ENST00000399976 METTL22Q9BUU2 404 aaPredicted RBP9.63□□□□□ -0.87
USP16-204ENST00000399976 MS4A1P11836 297 aa9.62□□□□□ -0.87
USP16-204ENST00000399976 RARSP54136 660 aaKnown RBP9.62□□□□□ -0.87
USP16-204ENST00000399976 FLIIQ13045 1269 aa9.62□□□□□ -0.87
USP16-204ENST00000399976 USPL1Q5W0Q7 1092 aa9.62□□□□□ -0.87
USP16-204ENST00000399976 PPP1R42Q7Z4L9 355 aa9.61□□□□□ -0.87
USP16-204ENST00000399976 XAGE3Q8WTP9 111 aa9.61□□□□□ -0.87
USP16-204ENST00000399976 PLA2G12BQ9BX93 195 aa9.61□□□□□ -0.87
USP16-204ENST00000399976 API5Q9BZZ5 524 aaKnown RBP9.61□□□□□ -0.87
USP16-204ENST00000399976 PARP3Q9Y6F1 533 aa9.61□□□□□ -0.87
USP16-204ENST00000399976 ABCC4O15439 1325 aa9.61□□□□□ -0.87
USP16-204ENST00000399976 KCNQ4P56696 695 aa9.61□□□□□ -0.87
USP16-204ENST00000399976 KRT24Q2M2I5 525 aa9.61□□□□□ -0.87
USP16-204ENST00000399976 GRIPAP1Q4V328 841 aa9.61□□□□□ -0.87
USP16-204ENST00000399976 COPS6Q7L5N1 327 aa9.61□□□□□ -0.87
USP16-204ENST00000399976 IPO8O15397 1037 aaKnown RBP9.6□□□□□ -0.87
USP16-204ENST00000399976 NFIXQ14938 502 aa9.6□□□□□ -0.87
USP16-204ENST00000399976 PROSER3Q2NL68 480 aa9.6□□□□□ -0.87
USP16-204ENST00000399976 LINS1Q8NG48 757 aa9.6□□□□□ -0.87
USP16-204ENST00000399976 CHD4Q14839 1912 aa9.6□□□□□ -0.87
USP16-204ENST00000399976 CDCA7LQ96GN5 454 aa9.6□□□□□ -0.87
USP16-204ENST00000399976 SETDB2Q96T68 719 aa9.6□□□□□ -0.87
USP16-204ENST00000399976 HDAC5Q9UQL6 1122 aa9.6□□□□□ -0.87
USP16-204ENST00000399976 NTSR2O95665 410 aa9.6□□□□□ -0.87
USP16-204ENST00000399976 EIF2S2P20042 333 aaKnown RBP9.6□□□□□ -0.87
USP16-204ENST00000399976 FKBP8Q14318 412 aa9.6□□□□□ -0.87
USP16-204ENST00000399976 ARXQ96QS3 562 aa9.6□□□□□ -0.87
USP16-204ENST00000399976 BRIP1Q9BX63 1249 aa9.6□□□□□ -0.87
USP16-204ENST00000399976 CACNA1SQ13698 1873 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 PSME4Q14997 1843 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 ARAP2Q8WZ64 1704 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 SLC4A2P04920 1241 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 PCCAP05165 728 aaPredicted RBP9.59□□□□□ -0.87
USP16-204ENST00000399976 DDR1Q08345 913 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 TTLL7Q6ZT98 887 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 TMC4Q7Z404 712 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 NEXNQ0ZGT2 675 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 CRY2Q49AN0 593 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 TBC1D9BQ66K14 1250 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 NLRP10Q86W26 655 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 DNAAF4Q8WXU2 420 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 SSH1Q8WYL5 1049 aa9.59□□□□□ -0.87
USP16-204ENST00000399976 PHF14O94880 888 aa9.58□□□□□ -0.88
USP16-204ENST00000399976 PDE6BP35913 854 aa9.58□□□□□ -0.88
USP16-204ENST00000399976 CCT4P50991 539 aaKnown RBP9.58□□□□□ -0.88
USP16-204ENST00000399976 ST5P78524 1137 aa9.58□□□□□ -0.88
USP16-204ENST00000399976 INTS3Q68E01 1043 aaKnown RBP9.58□□□□□ -0.88
USP16-204ENST00000399976 STYK1Q6J9G0 422 aa9.58□□□□□ -0.88
USP16-204ENST00000399976 TPTE2Q6XPS3 522 aa9.58□□□□□ -0.88
USP16-204ENST00000399976 SRP68Q9UHB9 627 aaKnown RBP9.58□□□□□ -0.88
USP16-204ENST00000399976 UBN2Q6ZU65 1347 aa9.58□□□□□ -0.88
USP16-204ENST00000399976 ZBTB22O15209 634 aa9.58□□□□□ -0.88
USP16-204ENST00000399976 MMP10P09238 476 aa9.58□□□□□ -0.88
USP16-204ENST00000399976 HOXA10P31260 410 aaPredicted RBP9.58□□□□□ -0.88
USP16-204ENST00000399976 AAMPQ13685 434 aa9.58□□□□□ -0.88
USP16-204ENST00000399976 ZBTB38Q8NAP3 1195 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms