RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 ZBTB24O43167 697 aaPredicted RBP12.83□□□□□ -0.36
CACNA1C-217ENST00000399641 TCIRG1Q13488 830 aa12.83□□□□□ -0.36
CACNA1C-217ENST00000399641 SMIM23A6NLE4 172 aa12.83□□□□□ -0.36
CACNA1C-217ENST00000399641 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 PPP2R5CQ13362 524 aa12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 GBP7Q8N8V2 638 aaPredicted RBP12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 DDB1Q16531 1140 aa12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 CKAP2LQ8IYA6 745 aa12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 BIRC2Q13490 618 aa12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 C1orf115Q9H7X2 142 aa12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 SAMM50Q9Y512 469 aa12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 PSMD6Q15008 389 aa12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 CBFA2T2O43439 604 aa12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 RRS1Q15050 365 aaKnown RBP12.82□□□□□ -0.36
CACNA1C-217ENST00000399641 TDRD12Q587J7 1177 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 AMOTL2Q9Y2J4 779 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 PPARDQ03181 441 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 CEP57Q86XR8 500 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 SRCIN1Q9C0H9 1055 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 SARNPP82979 210 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 TRAK2O60296 914 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 ZBTB16Q05516 673 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 PDCL2Q8N4E4 241 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 MORC4Q8TE76 937 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 CDC5LQ99459 802 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 DYNC1I1O14576 645 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 GNAI2P04899 355 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 EIF6P56537 245 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 SUDS3Q9H7L9 328 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 MRC2Q9UBG0 1479 aa12.81□□□□□ -0.36
CACNA1C-217ENST00000399641 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 CHRNA2Q15822 529 aa12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 CCDC174Q6PII3 467 aa12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 AKAP2Q9Y2D5 859 aa12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 B4DLN1 442 aa12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 MRPL12P52815 198 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 CFAP100Q494V2 611 aa12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 CCDC170Q8IYT3 715 aa12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 PRC1O43663 620 aa12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 MYOM3Q5VTT5 1437 aa12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
CACNA1C-217ENST00000399641 BICDL2A1A5D9 508 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 PPP1R12BO60237 982 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 IFIT5Q13325 482 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 ZBTB41Q5SVQ8 909 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 SPOUT1Q5T280 376 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 TRMT1Q9NXH9 659 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 ANKFY1Q9P2R3 1169 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 URI1O94763 535 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 LDHCP07864 332 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 CEP135Q66GS9 1140 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 CEP83Q9Y592 693 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 CRCPO75575 148 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 PRPF31Q8WWY3 499 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 SETDB1Q15047 1291 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 NCBP1Q09161 790 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 SMARCC1Q92922 1105 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 NUDT16Q96DE0 195 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 SELENOSQ9BQE4 189 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 CLSTN2Q9H4D0 955 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 ZSWIM4Q9H7M6 989 aa12.79□□□□□ -0.36
CACNA1C-217ENST00000399641 USP47Q96K76 1375 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 MRE11P49959 708 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 MYD88Q99836 296 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 ZNF644Q9H582 1327 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 GNAT3A8MTJ3 354 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 AACSQ86V21 672 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 CCDC89Q8N998 374 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 UBXN4Q92575 508 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 CD109Q6YHK3 1445 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 NEK4P51957 841 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 CCDC65Q8IXS2 484 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 VIMP08670 466 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 GEN1Q17RS7 908 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 TWISTNBQ3B726 338 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 CCDC117Q8IWD4 279 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 UTP14AQ9BVJ6 771 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 SWAP70Q9UH65 585 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 RTCBQ9Y3I0 505 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 BAG3O95817 575 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 TEX13AQ9BXU3 409 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-217ENST00000399641 SPECC1LQ69YQ0 1117 aa12.77□□□□□ -0.36
CACNA1C-217ENST00000399641 DPY19L2Q6NUT2 758 aa12.77□□□□□ -0.36
CACNA1C-217ENST00000399641 ZBED9Q6R2W3 1325 aa12.77□□□□□ -0.36
CACNA1C-217ENST00000399641 KIF4AO95239 1232 aa12.77□□□□□ -0.36
CACNA1C-217ENST00000399641 HAUS7Q99871 368 aa12.77□□□□□ -0.36
CACNA1C-217ENST00000399641 IQCGQ9H095 443 aaKnown RBP12.77□□□□□ -0.36
CACNA1C-217ENST00000399641 GPHNQ9NQX3 736 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms