RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 TM4SF1P30408 202 aa22.73■■□□□ 1.23
CTNS-203ENST00000399306 PROSER3Q2NL68 480 aa22.73■■□□□ 1.23
CTNS-203ENST00000399306 STK31Q9BXU1 1019 aa22.73■■□□□ 1.23
CTNS-203ENST00000399306 FKBP8Q14318 412 aa22.72■■□□□ 1.23
CTNS-203ENST00000399306 NECTIN2Q92692 538 aa22.72■■□□□ 1.23
CTNS-203ENST00000399306 ARXQ96QS3 562 aa22.71■■□□□ 1.23
CTNS-203ENST00000399306 NUP98P52948 1817 aa22.71■■□□□ 1.23
CTNS-203ENST00000399306 MSL1Q68DK7 614 aa22.7■■□□□ 1.22
CTNS-203ENST00000399306 COPS6Q7L5N1 327 aa22.7■■□□□ 1.22
CTNS-203ENST00000399306 SRCAPQ6ZRS2 3230 aa22.69■■□□□ 1.22
CTNS-203ENST00000399306 ATP10DQ9P241 1426 aa22.69■■□□□ 1.22
CTNS-203ENST00000399306 MMP10P09238 476 aa22.69■■□□□ 1.22
CTNS-203ENST00000399306 GIGYF2Q6Y7W6 1299 aaKnown RBP22.69■■□□□ 1.22
CTNS-203ENST00000399306 TTLL7Q6ZT98 887 aa22.69■■□□□ 1.22
CTNS-203ENST00000399306 XAGE3Q8WTP9 111 aa22.69■■□□□ 1.22
CTNS-203ENST00000399306 ANXA1P04083 346 aa22.68■■□□□ 1.22
CTNS-203ENST00000399306 PARP3Q9Y6F1 533 aa22.68■■□□□ 1.22
CTNS-203ENST00000399306 NFIXQ14938 502 aa22.67■■□□□ 1.22
CTNS-203ENST00000399306 HSP90AB3PQ58FF7 597 aa22.67■■□□□ 1.22
CTNS-203ENST00000399306 PLBD2Q8NHP8 589 aa22.67■■□□□ 1.22
CTNS-203ENST00000399306 NRXN2Q9P2S2 1712 aa22.67■■□□□ 1.22
CTNS-203ENST00000399306 CARMIL3Q8ND23 1372 aa22.66■■□□□ 1.22
CTNS-203ENST00000399306 POLRMTO00411 1230 aaKnown RBP22.66■■□□□ 1.22
CTNS-203ENST00000399306 DDX58O95786 925 aaKnown RBP22.66■■□□□ 1.22
CTNS-203ENST00000399306 ANKRD13DQ6ZTN6 518 aa22.66■■□□□ 1.22
CTNS-203ENST00000399306 SETDB2Q96T68 719 aa22.66■■□□□ 1.22
CTNS-203ENST00000399306 PPP1R1BQ9UD71 204 aaPredicted RBP22.66■■□□□ 1.22
CTNS-203ENST00000399306 SLC4A2P04920 1241 aa22.65■■□□□ 1.22
CTNS-203ENST00000399306 ALDH1L2Q3SY69 923 aa22.65■■□□□ 1.22
CTNS-203ENST00000399306 TBC1D9BQ66K14 1250 aa22.65■■□□□ 1.22
CTNS-203ENST00000399306 KIF13BQ9NQT8 1826 aa22.64■■□□□ 1.22
CTNS-203ENST00000399306 DDR1Q08345 913 aa22.64■■□□□ 1.21
CTNS-203ENST00000399306 HLFQ16534 295 aa22.64■■□□□ 1.21
CTNS-203ENST00000399306 CD2APQ9Y5K6 639 aa22.64■■□□□ 1.21
CTNS-203ENST00000399306 IBTKQ9P2D0 1353 aaPredicted RBP22.63■■□□□ 1.21
CTNS-203ENST00000399306 ANKRD36CQ5JPF3 1778 aa22.63■■□□□ 1.21
CTNS-203ENST00000399306 AIMP1Q12904 312 aaKnown RBP22.63■■□□□ 1.21
CTNS-203ENST00000399306 ZBTB3Q9H5J0 574 aa22.63■■□□□ 1.21
CTNS-203ENST00000399306 PHAXQ9H814 394 aaKnown RBP22.63■■□□□ 1.21
CTNS-203ENST00000399306 AFDNP55196 1824 aaKnown RBP22.63■■□□□ 1.21
CTNS-203ENST00000399306 PARP10Q53GL7 1025 aa22.62■■□□□ 1.21
CTNS-203ENST00000399306 ZNF34Q8IZ26 560 aa22.62■■□□□ 1.21
CTNS-203ENST00000399306 ARFGEF2Q9Y6D5 1785 aa22.61■■□□□ 1.21
CTNS-203ENST00000399306 SERPINB2P05120 415 aa22.61■■□□□ 1.21
CTNS-203ENST00000399306 BRPF1P55201 1214 aaPredicted RBP22.61■■□□□ 1.21
CTNS-203ENST00000399306 FLIIQ13045 1269 aa22.61■■□□□ 1.21
CTNS-203ENST00000399306 TCIRG1Q13488 830 aa22.61■■□□□ 1.21
CTNS-203ENST00000399306 C10orf71Q711Q0 1435 aa22.61■■□□□ 1.21
CTNS-203ENST00000399306 NIP7Q9Y221 180 aaKnown RBP eCLIP22.61■■□□□ 1.21
CTNS-203ENST00000399306 TRIM28Q13263 835 aaKnown RBP22.6■■□□□ 1.21
CTNS-203ENST00000399306 KSR2Q6VAB6 950 aa22.6■■□□□ 1.21
CTNS-203ENST00000399306 RNF123Q5XPI4 1314 aa22.59■■□□□ 1.21
CTNS-203ENST00000399306 RIC3Q7Z5B4 369 aa22.59■■□□□ 1.21
CTNS-203ENST00000399306 NYXQ9GZU5 481 aa22.59■■□□□ 1.21
CTNS-203ENST00000399306 TPTE2Q6XPS3 522 aa22.58■■□□□ 1.21
CTNS-203ENST00000399306 PDZRN3Q9UPQ7 1066 aa22.58■■□□□ 1.21
CTNS-203ENST00000399306 BICDL1Q6ZP65 573 aa22.57■■□□□ 1.2
CTNS-203ENST00000399306 G2E3Q7L622 706 aa22.57■■□□□ 1.2
CTNS-203ENST00000399306 PPP1R42Q7Z4L9 355 aa22.57■■□□□ 1.2
CTNS-203ENST00000399306 MRPL50Q8N5N7 158 aaKnown RBP22.57■■□□□ 1.2
CTNS-203ENST00000399306 SSH1Q8WYL5 1049 aa22.57■■□□□ 1.2
CTNS-203ENST00000399306 ISCA1Q9BUE6 129 aa22.57■■□□□ 1.2
CTNS-203ENST00000399306 FHDC1Q9C0D6 1143 aaPredicted RBP22.57■■□□□ 1.2
CTNS-203ENST00000399306 TCERG1O14776 1098 aaKnown RBP22.56■■□□□ 1.2
CTNS-203ENST00000399306 TGFB2P61812 414 aa22.56■■□□□ 1.2
CTNS-203ENST00000399306 SYT17Q9BSW7 474 aa22.56■■□□□ 1.2
CTNS-203ENST00000399306 METTL22Q9BUU2 404 aaPredicted RBP22.56■■□□□ 1.2
CTNS-203ENST00000399306 RIC1Q4ADV7 1423 aa22.56■■□□□ 1.2
CTNS-203ENST00000399306 PTPRCP08575 1304 aa22.56■■□□□ 1.2
CTNS-203ENST00000399306 ADCY9O60503 1353 aa22.55■■□□□ 1.2
CTNS-203ENST00000399306 PI4KAP2A4QPH2 592 aa22.55■■□□□ 1.2
CTNS-203ENST00000399306 FKBP5Q13451 457 aaPredicted RBP22.55■■□□□ 1.2
CTNS-203ENST00000399306 PRR5LQ6MZQ0 368 aa22.55■■□□□ 1.2
CTNS-203ENST00000399306 NBPF5PQ86XG9 351 aaPredicted RBP22.55■■□□□ 1.2
CTNS-203ENST00000399306 PI4KAP1Q8N8J0 262 aa22.55■■□□□ 1.2
CTNS-203ENST00000399306 CNBD1Q8NA66 436 aa22.55■■□□□ 1.2
CTNS-203ENST00000399306 UBN2Q6ZU65 1347 aa22.55■■□□□ 1.2
CTNS-203ENST00000399306 RARSP54136 660 aaKnown RBP22.54■■□□□ 1.2
CTNS-203ENST00000399306 BRIP1Q9BX63 1249 aa22.54■■□□□ 1.2
CTNS-203ENST00000399306 ST5P78524 1137 aa22.53■■□□□ 1.2
CTNS-203ENST00000399306 NLRP10Q86W26 655 aa22.53■■□□□ 1.2
CTNS-203ENST00000399306 CCDC191Q8NCU4 936 aa22.53■■□□□ 1.2
CTNS-203ENST00000399306 MAP3K2Q9Y2U5 619 aa22.53■■□□□ 1.2
CTNS-203ENST00000399306 GPTP24298 496 aa22.52■■□□□ 1.2
CTNS-203ENST00000399306 NEXNQ0ZGT2 675 aa22.52■■□□□ 1.2
CTNS-203ENST00000399306 DNAAF4Q8WXU2 420 aa22.52■■□□□ 1.2
CTNS-203ENST00000399306 SMC4Q9NTJ3 1288 aa22.52■■□□□ 1.2
CTNS-203ENST00000399306 NTSR2O95665 410 aa22.51■■□□□ 1.19
CTNS-203ENST00000399306 SUSD4Q5VX71 490 aa22.51■■□□□ 1.19
CTNS-203ENST00000399306 UTP14AQ9BVJ6 771 aaKnown RBP22.51■■□□□ 1.19
CTNS-203ENST00000399306 KIF16BQ96L93 1317 aa22.51■■□□□ 1.19
CTNS-203ENST00000399306 KIAA1551Q9HCM1 1747 aa22.51■■□□□ 1.19
CTNS-203ENST00000399306 PDE6BP35913 854 aa22.5■■□□□ 1.19
CTNS-203ENST00000399306 ARHGAP45Q92619 1136 aa22.5■■□□□ 1.19
CTNS-203ENST00000399306 ANKRD31Q8N7Z5 1873 aa22.49■■□□□ 1.19
CTNS-203ENST00000399306 KLRG2A4D1S0 409 aaPredicted RBP22.49■■□□□ 1.19
CTNS-203ENST00000399306 NPHP1O15259 732 aa22.49■■□□□ 1.19
CTNS-203ENST00000399306 SLC10A5Q5PT55 438 aa22.49■■□□□ 1.19
CTNS-203ENST00000399306 LINS1Q8NG48 757 aa22.49■■□□□ 1.19
CTNS-203ENST00000399306 MYD88Q99836 296 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms