RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 NUTM1Q86Y26 1132 aa11.07□□□□□ -0.64
SMAD9-203ENST00000399275 DHX16O60231 1041 aaKnown RBP11.06□□□□□ -0.64
SMAD9-203ENST00000399275 ANAPC15P60006 121 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 ANKS4BQ8N8V4 417 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 DDX19AQ9NUU7 478 aaKnown RBP11.06□□□□□ -0.64
SMAD9-203ENST00000399275 CTTNBP2Q8WZ74 1663 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 CTAGE5O15320 804 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 CEP104O60308 925 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 PRIM1P49642 420 aaKnown RBP11.06□□□□□ -0.64
SMAD9-203ENST00000399275 SNW1Q13573 536 aaKnown RBP11.06□□□□□ -0.64
SMAD9-203ENST00000399275 TMEM132EQ6IEE7 984 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 UPF3BQ9BZI7 483 aaKnown RBP11.06□□□□□ -0.64
SMAD9-203ENST00000399275 DACH1Q9UI36 760 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 STK38Q15208 465 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 JMYQ8N9B5 988 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 RPGRIP1LQ68CZ1 1315 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 GSDMDP57764 484 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 GAS2L2Q8NHY3 880 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 MAGEC2Q9UBF1 373 aaPredicted RBP11.06□□□□□ -0.64
SMAD9-203ENST00000399275 ATAD2Q6PL18 1390 aa11.06□□□□□ -0.64
SMAD9-203ENST00000399275 TACC1O75410 805 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 ZNF445P59923 1031 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 ARHGAP45Q92619 1136 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 TSPYL2Q9H2G4 693 aaPredicted RBP11.05□□□□□ -0.64
SMAD9-203ENST00000399275 KIF14Q15058 1648 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 MX1P20591 662 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 LACTBP83111 547 aaPredicted RBP11.05□□□□□ -0.64
SMAD9-203ENST00000399275 CCDC92Q53HC0 331 aaPredicted RBP11.05□□□□□ -0.64
SMAD9-203ENST00000399275 NECTIN2Q92692 538 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 ZC4H2Q9NQZ6 224 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 RAI14Q9P0K7 980 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 UHRF1BP1Q6BDS2 1440 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 FOSBP53539 338 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 SLMAPQ14BN4 828 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 JAKMIP1Q96N16 626 aaKnown RBP11.05□□□□□ -0.64
SMAD9-203ENST00000399275 NSRP1Q9H0G5 558 aaKnown RBP11.05□□□□□ -0.64
SMAD9-203ENST00000399275 ANO10Q9NW15 660 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 STIM2Q9P246 746 aa11.05□□□□□ -0.64
SMAD9-203ENST00000399275 KRT32Q14532 448 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 MAP7D1Q3KQU3 841 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 BLOC1S2Q6QNY1 142 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 TAF4BQ92750 862 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 LIMCH1Q9UPQ0 1083 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 EIF2AK4Q9P2K8 1649 aaKnown RBP11.04□□□□□ -0.64
SMAD9-203ENST00000399275 MAP7Q14244 749 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 B4GALNT4Q76KP1 1039 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 SLU7O95391 586 aaKnown RBP11.04□□□□□ -0.64
SMAD9-203ENST00000399275 U2AF2P26368 475 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMAD9-203ENST00000399275 ME1P48163 572 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 ARMCX6Q7L4S7 300 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 GTF3C6Q969F1 213 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 TRIM4Q9C037 500 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 KIAA0586Q9BVV6 1533 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 IMMTQ16891 758 aaKnown RBP11.04□□□□□ -0.64
SMAD9-203ENST00000399275 PDCD7Q8N8D1 485 aaKnown RBP11.04□□□□□ -0.64
SMAD9-203ENST00000399275 HSF2BPO75031 334 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 CCDC174Q6PII3 467 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 DDX12PQ92771 950 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 SERPINA10Q9UK55 444 aa11.04□□□□□ -0.64
SMAD9-203ENST00000399275 POLR3AO14802 1390 aaPredicted RBP11.03□□□□□ -0.64
SMAD9-203ENST00000399275 RAB11FIP3O75154 756 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 MIER3Q7Z3K6 550 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 MAATS1Q7Z4T9 603 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 RALYLQ86SE5 291 aaKnown RBP11.03□□□□□ -0.64
SMAD9-203ENST00000399275 SATB2Q9UPW6 733 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 FSD2A1L4K1 749 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 CCDC38Q502W7 563 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 TUBB4AP04350 444 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 CASTP20810 708 aaKnown RBP11.03□□□□□ -0.64
SMAD9-203ENST00000399275 CAMK4Q16566 473 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 LTV1Q96GA3 475 aaPredicted RBP11.03□□□□□ -0.64
SMAD9-203ENST00000399275 PPP1R9BQ96SB3 815 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 TEX14Q8IWB6 1497 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 ANKRD18BA2A2Z9 1011 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 STX6O43752 255 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 KIF1CO43896 1103 aaKnown RBP11.03□□□□□ -0.64
SMAD9-203ENST00000399275 CACNA2D3Q8IZS8 1091 aa11.03□□□□□ -0.64
SMAD9-203ENST00000399275 OPA1O60313 960 aa11.02□□□□□ -0.64
SMAD9-203ENST00000399275 VPS53Q5VIR6 699 aa11.02□□□□□ -0.64
SMAD9-203ENST00000399275 CCDC83Q8IWF9 413 aa11.02□□□□□ -0.64
SMAD9-203ENST00000399275 MYRIPQ8NFW9 859 aa11.02□□□□□ -0.64
SMAD9-203ENST00000399275 TMX3Q96JJ7 454 aa11.02□□□□□ -0.64
SMAD9-203ENST00000399275 DDX23Q9BUQ8 820 aaKnown RBP11.02□□□□□ -0.65
SMAD9-203ENST00000399275 PPP1R12BO60237 982 aaPredicted RBP11.02□□□□□ -0.65
SMAD9-203ENST00000399275 RNF8O76064 485 aa11.02□□□□□ -0.65
SMAD9-203ENST00000399275 CEBPZQ03701 1054 aaKnown RBP11.02□□□□□ -0.65
SMAD9-203ENST00000399275 TSNAXIP1Q2TAA8 658 aa11.02□□□□□ -0.65
SMAD9-203ENST00000399275 USP6NLQ92738 828 aa11.02□□□□□ -0.65
SMAD9-203ENST00000399275 ZKSCAN8Q15776 578 aaPredicted RBP11.02□□□□□ -0.65
SMAD9-203ENST00000399275 CFAP100Q494V2 611 aa11.02□□□□□ -0.65
SMAD9-203ENST00000399275 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMAD9-203ENST00000399275 ZNF500O60304 480 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-203ENST00000399275 HCLS1P14317 486 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-203ENST00000399275 PAFAH1B1P43034 410 aa11.01□□□□□ -0.65
SMAD9-203ENST00000399275 TPX2Q9ULW0 747 aaKnown RBP11.01□□□□□ -0.65
SMAD9-203ENST00000399275 CCDC196A0A1B0GTZ2 297 aa11.01□□□□□ -0.65
SMAD9-203ENST00000399275 PER1O15534 1290 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-203ENST00000399275 ZSCAN26Q16670 478 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms