RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 CNPY2Q9Y2B0 182 aa17.55■□□□□ 0.4
CCDC144A-205ENST00000399264 RPAP1Q9BWH6 1393 aaPredicted RBP17.55■□□□□ 0.4
CCDC144A-205ENST00000399264 N4BP2Q86UW6 1770 aaPredicted RBP17.55■□□□□ 0.4
CCDC144A-205ENST00000399264 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.55■□□□□ 0.4
CCDC144A-205ENST00000399264 MED1Q15648 1581 aaPredicted RBP17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 TRHP20396 242 aaPredicted RBP17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 AACSQ86V21 672 aa17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 ZSCAN30Q86W11 494 aa17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 CLASRPQ8N2M8 674 aaKnown RBP17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 IL17RAQ96F46 866 aa17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 KSR2Q6VAB6 950 aa17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 KIAA1211Q6ZU35 1233 aa17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 KCNH5Q8NCM2 988 aa17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 DDX17Q92841 729 aaKnown RBP17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 FAM227BQ96M60 508 aa17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 DIAPH3Q9NSV4 1193 aa17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 KDM3BQ7LBC6 1761 aa17.54■□□□□ 0.4
CCDC144A-205ENST00000399264 SASH1O94885 1247 aa17.53■□□□□ 0.4
CCDC144A-205ENST00000399264 HOXB7P09629 217 aa17.53■□□□□ 0.4
CCDC144A-205ENST00000399264 MYL6BP14649 208 aa17.53■□□□□ 0.4
CCDC144A-205ENST00000399264 BICC1Q9H694 974 aaKnown RBP17.53■□□□□ 0.4
CCDC144A-205ENST00000399264 EAF2Q96CJ1 260 aaPredicted RBP17.53■□□□□ 0.4
CCDC144A-205ENST00000399264 TAF6LQ9Y6J9 622 aa17.53■□□□□ 0.4
CCDC144A-205ENST00000399264 GLRX3O76003 335 aaKnown RBP17.53■□□□□ 0.4
CCDC144A-205ENST00000399264 SYT1P21579 422 aa17.53■□□□□ 0.4
CCDC144A-205ENST00000399264 PDLIM2Q96JY6 352 aa17.53■□□□□ 0.4
CCDC144A-205ENST00000399264 TCEANC2Q96MN5 208 aa17.53■□□□□ 0.4
CCDC144A-205ENST00000399264 IFIT2P09913 472 aaKnown RBP17.52■□□□□ 0.4
CCDC144A-205ENST00000399264 CCDC83Q8IWF9 413 aa17.52■□□□□ 0.4
CCDC144A-205ENST00000399264 JAKMIP1Q96N16 626 aaKnown RBP17.52■□□□□ 0.4
CCDC144A-205ENST00000399264 ECHDC1Q9NTX5 307 aa17.52■□□□□ 0.4
CCDC144A-205ENST00000399264 PDIA6Q15084 440 aa17.52■□□□□ 0.39
CCDC144A-205ENST00000399264 NECAB1Q8N987 351 aa17.52■□□□□ 0.39
CCDC144A-205ENST00000399264 EDC3Q96F86 508 aaKnown RBP17.52■□□□□ 0.39
CCDC144A-205ENST00000399264 CHGBP05060 677 aa17.51■□□□□ 0.39
CCDC144A-205ENST00000399264 NDUFB9Q9Y6M9 179 aa17.51■□□□□ 0.39
CCDC144A-205ENST00000399264 USP54Q70EL1 1684 aa17.51■□□□□ 0.39
CCDC144A-205ENST00000399264 IGKV5-2P06315 115 aa17.51■□□□□ 0.39
CCDC144A-205ENST00000399264 MTX1Q13505 466 aa17.51■□□□□ 0.39
CCDC144A-205ENST00000399264 EPHA10Q5JZY3 1008 aa17.51■□□□□ 0.39
CCDC144A-205ENST00000399264 HYPKQ9NX55 129 aa17.51■□□□□ 0.39
CCDC144A-205ENST00000399264 LIMCH1Q9UPQ0 1083 aa17.51■□□□□ 0.39
CCDC144A-205ENST00000399264 CHD2O14647 1828 aaKnown RBP17.51■□□□□ 0.39
CCDC144A-205ENST00000399264 MBD3O95983 291 aa17.5■□□□□ 0.39
CCDC144A-205ENST00000399264 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
CCDC144A-205ENST00000399264 WDR33Q9C0J8 1336 aaKnown RBP17.5■□□□□ 0.39
CCDC144A-205ENST00000399264 GRM8O00222 908 aa17.5■□□□□ 0.39
CCDC144A-205ENST00000399264 ST3GAL1Q11201 340 aa17.5■□□□□ 0.39
CCDC144A-205ENST00000399264 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
CCDC144A-205ENST00000399264 HSP90AB4PQ58FF6 505 aa17.49■□□□□ 0.39
CCDC144A-205ENST00000399264 FIBPO43427 364 aa17.49■□□□□ 0.39
CCDC144A-205ENST00000399264 MSNP26038 577 aaKnown RBP17.49■□□□□ 0.39
CCDC144A-205ENST00000399264 NFATC2IPQ8NCF5 419 aa17.49■□□□□ 0.39
CCDC144A-205ENST00000399264 TTC41PQ6P2S7 1318 aa17.48■□□□□ 0.39
CCDC144A-205ENST00000399264 USP42Q9H9J4 1324 aaKnown RBP17.48■□□□□ 0.39
CCDC144A-205ENST00000399264 STX6O43752 255 aa17.48■□□□□ 0.39
CCDC144A-205ENST00000399264 ZSCAN22P10073 491 aaPredicted RBP17.48■□□□□ 0.39
CCDC144A-205ENST00000399264 NMIQ13287 307 aaPredicted RBP17.48■□□□□ 0.39
CCDC144A-205ENST00000399264 HEG1Q9ULI3 1381 aa17.48■□□□□ 0.39
CCDC144A-205ENST00000399264 ALDH1L1O75891 902 aa17.48■□□□□ 0.39
CCDC144A-205ENST00000399264 PDRG1Q9NUG6 133 aa17.48■□□□□ 0.39
CCDC144A-205ENST00000399264 SMC3Q9UQE7 1217 aa17.48■□□□□ 0.39
CCDC144A-205ENST00000399264 ADGRL3Q9HAR2 1447 aa17.47■□□□□ 0.39
CCDC144A-205ENST00000399264 A0A0D9SFI3 127 aa17.47■□□□□ 0.39
CCDC144A-205ENST00000399264 GJB2P29033 226 aa17.47■□□□□ 0.39
CCDC144A-205ENST00000399264 KRT28Q7Z3Y7 464 aa17.47■□□□□ 0.39
CCDC144A-205ENST00000399264 LINS1Q8NG48 757 aa17.47■□□□□ 0.39
CCDC144A-205ENST00000399264 ME3Q16798 604 aa17.47■□□□□ 0.39
CCDC144A-205ENST00000399264 RIC3Q7Z5B4 369 aa17.47■□□□□ 0.39
CCDC144A-205ENST00000399264 CABLES1Q8TDN4 633 aa17.47■□□□□ 0.39
CCDC144A-205ENST00000399264 TSPY26PQ9H489 355 aa17.47■□□□□ 0.39
CCDC144A-205ENST00000399264 RBM8AQ9Y5S9 174 aaKnown RBP17.47■□□□□ 0.39
CCDC144A-205ENST00000399264 LMO7Q8WWI1 1683 aa17.47■□□□□ 0.39
CCDC144A-205ENST00000399264 NECTIN1Q15223 517 aa17.46■□□□□ 0.39
CCDC144A-205ENST00000399264 FAM173BQ6P4H8 233 aa17.46■□□□□ 0.39
CCDC144A-205ENST00000399264 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.39
CCDC144A-205ENST00000399264 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
CCDC144A-205ENST00000399264 DNM1Q05193 864 aaKnown RBP17.46■□□□□ 0.39
CCDC144A-205ENST00000399264 COPS6Q7L5N1 327 aa17.46■□□□□ 0.39
CCDC144A-205ENST00000399264 XAGE3Q8WTP9 111 aa17.46■□□□□ 0.39
CCDC144A-205ENST00000399264 DDX21Q9NR30 783 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCDC144A-205ENST00000399264 NOL7Q9UMY1 257 aaKnown RBP17.46■□□□□ 0.39
CCDC144A-205ENST00000399264 G3BP1Q13283 466 aaKnown RBP eCLIP17.45■□□□□ 0.38
CCDC144A-205ENST00000399264 ZNF790Q6PG37 636 aa17.45■□□□□ 0.38
CCDC144A-205ENST00000399264 TPCN1Q9ULQ1 816 aa17.45■□□□□ 0.38
CCDC144A-205ENST00000399264 CCDC9Q9Y3X0 531 aaKnown RBP17.45■□□□□ 0.38
CCDC144A-205ENST00000399264 USP16Q9Y5T5 823 aa17.45■□□□□ 0.38
CCDC144A-205ENST00000399264 KCNJ4P48050 445 aa17.45■□□□□ 0.38
CCDC144A-205ENST00000399264 RGPD5Q99666 1765 aa17.45■□□□□ 0.38
CCDC144A-205ENST00000399264 CCDC171Q6TFL3 1326 aa17.45■□□□□ 0.38
CCDC144A-205ENST00000399264 F13A1P00488 732 aa17.44■□□□□ 0.38
CCDC144A-205ENST00000399264 CREB3L3Q68CJ9 461 aa17.44■□□□□ 0.38
CCDC144A-205ENST00000399264 ZNF589Q86UQ0 364 aaPredicted RBP17.44■□□□□ 0.38
CCDC144A-205ENST00000399264 FERMT3Q86UX7 667 aa17.44■□□□□ 0.38
CCDC144A-205ENST00000399264 ZNF496Q96IT1 587 aaPredicted RBP17.44■□□□□ 0.38
CCDC144A-205ENST00000399264 MYD88Q99836 296 aa17.44■□□□□ 0.38
CCDC144A-205ENST00000399264 EVI5LQ96CN4 794 aa17.44■□□□□ 0.38
CCDC144A-205ENST00000399264 ZSWIM6Q9HCJ5 1215 aa17.44■□□□□ 0.38
CCDC144A-205ENST00000399264 VPS37CA5D8V6 355 aaPredicted RBP17.43■□□□□ 0.38
CCDC144A-205ENST00000399264 EPB41L2O43491 1005 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms