RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 U2AF2P26368 475 aaKnown RBP eCLIP16.72■□□□□ 0.272e-13■■□□□ 14.2
APOB-202ENST00000399256 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
APOB-202ENST00000399256 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
APOB-202ENST00000399256 CHD2O14647 1828 aaKnown RBP16.72■□□□□ 0.27
APOB-202ENST00000399256 EPB41L2O43491 1005 aaKnown RBP16.72■□□□□ 0.27
APOB-202ENST00000399256 PTGS1P23219 599 aa16.71■□□□□ 0.27
APOB-202ENST00000399256 PPP1R42Q7Z4L9 355 aa16.71■□□□□ 0.27
APOB-202ENST00000399256 AKAP12Q02952 1782 aa16.71■□□□□ 0.27
APOB-202ENST00000399256 RHPN1Q8TCX5 695 aa16.71■□□□□ 0.27
APOB-202ENST00000399256 GOLGA6L6A8MZA4 724 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 CCDC192P0DO97 292 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 CAMK4Q16566 473 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 CNTROBQ8N137 903 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 HYPKQ9NX55 129 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 SSH3Q8TE77 659 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 TPM3P06753 285 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 JAKMIP1Q96N16 626 aaKnown RBP16.7■□□□□ 0.26
APOB-202ENST00000399256 ACEP12821 1306 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 LUZP1Q86V48 1076 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 GTPBP4Q9BZE4 634 aaKnown RBP16.69■□□□□ 0.26
APOB-202ENST00000399256 PDRG1Q9NUG6 133 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 OVOS2A0A0J9YW53 1432 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 OVOS2Q6IE36 1432 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 RGPD1P0DJD0 1748 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 ANKRD7Q92527 254 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 IGSF3O75054 1194 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 RAB11FIP3O75154 756 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
APOB-202ENST00000399256 FERMT3Q86UX7 667 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 SRGAP3O43295 1099 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 KCNA6P17658 529 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 PTH1RQ03431 593 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 FAM173BQ6P4H8 233 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 PHAXQ9H814 394 aaKnown RBP16.68■□□□□ 0.26
APOB-202ENST00000399256 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 FAM208AQ9UK61 1670 aaKnown RBP16.67■□□□□ 0.26
APOB-202ENST00000399256 LIG1P18858 919 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 LRMPQ12912 555 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 TTC6Q86TZ1 520 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 CKAP2LQ8IYA6 745 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 FAM200AQ8TCP9 573 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 DRC7Q8IY82 874 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 MRVI1Q9Y6F6 885 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 CTIFO43310 598 aaKnown RBP16.66■□□□□ 0.26
APOB-202ENST00000399256 TYRO3Q06418 890 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 MAP3K11Q16584 847 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 CCDC186Q7Z3E2 898 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 KIF1BPQ96EK5 621 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 C16orf45Q96MC5 204 aaPredicted RBP16.66■□□□□ 0.26
APOB-202ENST00000399256 NUP62CLQ9H1M0 184 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 ME3Q16798 604 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 EYA1Q99502 592 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 NRBP1Q9UHY1 535 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 POLA2Q14181 598 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 PODXL2Q9NZ53 605 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 VPS53Q5VIR6 699 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 CYP46A1Q9Y6A2 500 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 LMTK3Q96Q04 1460 aa16.64■□□□□ 0.25
APOB-202ENST00000399256 CDC37L1Q7L3B6 337 aa16.64■□□□□ 0.25
APOB-202ENST00000399256 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
APOB-202ENST00000399256 NCBP1Q09161 790 aaKnown RBP16.64■□□□□ 0.25
APOB-202ENST00000399256 LARP1BQ659C4 914 aaKnown RBP16.64■□□□□ 0.25
APOB-202ENST00000399256 BCL11BQ9C0K0 894 aaPredicted RBP16.64■□□□□ 0.25
APOB-202ENST00000399256 KRT85P78386 507 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 OS9Q13438 667 aaPredicted RBP16.63■□□□□ 0.25
APOB-202ENST00000399256 ANO6Q4KMQ2 910 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 ZSCAN31Q96LW9 406 aaPredicted RBP16.63■□□□□ 0.25
APOB-202ENST00000399256 TOPAZ1Q8N9V7 1692 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 HDGFL1Q5TGJ6 251 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 CBX8Q9HC52 389 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 SH2B1Q9NRF2 756 aaPredicted RBP16.63■□□□□ 0.25
APOB-202ENST00000399256 NWD1Q149M9 1564 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 TNMDQ9H2S6 317 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 ZSWIM6Q9HCJ5 1215 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 A0A0U1RQG5 324 aaPredicted RBP16.62■□□□□ 0.25
APOB-202ENST00000399256 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 AMPHP49418 695 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 DACT1Q9NYF0 836 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 HSPA2P54652 639 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 COL9A3Q14050 684 aaPredicted RBP16.62■□□□□ 0.25
APOB-202ENST00000399256 NAA30Q147X3 362 aaPredicted RBP16.62■□□□□ 0.25
APOB-202ENST00000399256 TRIM5Q9C035 493 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 USP6P35125 1406 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 KIF20AO95235 890 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 TFIP11Q9UBB9 837 aaKnown RBP16.61■□□□□ 0.25
APOB-202ENST00000399256 EIF2S2P20042 333 aaKnown RBP16.61■□□□□ 0.25
APOB-202ENST00000399256 RUFY2Q8WXA3 655 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 USP31Q70CQ4 1352 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 NALCNQ8IZF0 1738 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 GLRX3O76003 335 aaKnown RBP16.61■□□□□ 0.25
APOB-202ENST00000399256 TNNT1P13805 278 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 TCEANC2Q96MN5 208 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 KDRP35968 1356 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 PXDNLA1KZ92 1463 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 GOLGA6L4A6NEF3 574 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 KCNJ4P48050 445 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms