RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 RBM42Q9BTD8 480 aaKnown RBP21.59■■□□□ 1.05
HLA-DQB1-204ENST00000399084 IL1RAPL2Q9NP60 686 aa21.59■■□□□ 1.05
HLA-DQB1-204ENST00000399084 CD2BP2O95400 341 aaKnown RBP21.58■■□□□ 1.05
HLA-DQB1-204ENST00000399084 ANKRD13DQ6ZTN6 518 aa21.58■■□□□ 1.05
HLA-DQB1-204ENST00000399084 ZCRB1Q8TBF4 217 aaKnown RBP21.58■■□□□ 1.05
HLA-DQB1-204ENST00000399084 CARD10Q9BWT7 1032 aa21.58■■□□□ 1.05
HLA-DQB1-204ENST00000399084 PRAMEF22A3QJZ6 481 aa21.58■■□□□ 1.04
HLA-DQB1-204ENST00000399084 SLC39A6Q13433 755 aa21.58■■□□□ 1.04
HLA-DQB1-204ENST00000399084 NEURL1BA8MQ27 555 aa21.56■■□□□ 1.04
HLA-DQB1-204ENST00000399084 GCKRQ14397 625 aa21.56■■□□□ 1.04
HLA-DQB1-204ENST00000399084 CWF19L2Q2TBE0 894 aaKnown RBP21.56■■□□□ 1.04
HLA-DQB1-204ENST00000399084 COPS6Q7L5N1 327 aa21.56■■□□□ 1.04
HLA-DQB1-204ENST00000399084 XAGE3Q8WTP9 111 aa21.56■■□□□ 1.04
HLA-DQB1-204ENST00000399084 RUFY2Q8WXA3 655 aa21.56■■□□□ 1.04
HLA-DQB1-204ENST00000399084 ECHDC1Q9NTX5 307 aa21.56■■□□□ 1.04
HLA-DQB1-204ENST00000399084 G3BP1Q13283 466 aaKnown RBP eCLIP21.55■■□□□ 1.04
HLA-DQB1-204ENST00000399084 LRP10Q7Z4F1 713 aa21.55■■□□□ 1.04
HLA-DQB1-204ENST00000399084 NUTM1Q86Y26 1132 aa21.55■■□□□ 1.04
HLA-DQB1-204ENST00000399084 TNPO1Q92973 898 aaKnown RBP21.55■■□□□ 1.04
HLA-DQB1-204ENST00000399084 ISY1Q9ULR0 285 aaKnown RBP21.55■■□□□ 1.04
HLA-DQB1-204ENST00000399084 C5P01031 1676 aa21.55■■□□□ 1.04
HLA-DQB1-204ENST00000399084 GOLGA6L22H0YM25 854 aa21.55■■□□□ 1.04
HLA-DQB1-204ENST00000399084 IGKV5-2P06315 115 aa21.55■■□□□ 1.04
HLA-DQB1-204ENST00000399084 TOM1L2Q6ZVM7 507 aa21.55■■□□□ 1.04
HLA-DQB1-204ENST00000399084 COL5A2P05997 1499 aaPredicted RBP21.54■■□□□ 1.04
HLA-DQB1-204ENST00000399084 IFIT2P09913 472 aaKnown RBP21.54■■□□□ 1.04
HLA-DQB1-204ENST00000399084 AIMP1Q12904 312 aaKnown RBP21.54■■□□□ 1.04
HLA-DQB1-204ENST00000399084 L1TD1Q5T7N2 865 aaKnown RBP21.54■■□□□ 1.04
HLA-DQB1-204ENST00000399084 HIP1O00291 1037 aa21.53■■□□□ 1.04
HLA-DQB1-204ENST00000399084 IL2RBP14784 551 aa21.53■■□□□ 1.04
HLA-DQB1-204ENST00000399084 PLBD2Q8NHP8 589 aa21.53■■□□□ 1.04
HLA-DQB1-204ENST00000399084 ANO2Q9NQ90 1003 aa21.53■■□□□ 1.04
HLA-DQB1-204ENST00000399084 LAMB4A4D0S4 1761 aa21.53■■□□□ 1.04
HLA-DQB1-204ENST00000399084 SGSM2O43147 1006 aa21.52■■□□□ 1.04
HLA-DQB1-204ENST00000399084 TRAK2O60296 914 aa21.52■■□□□ 1.04
HLA-DQB1-204ENST00000399084 TSHZ3Q63HK5 1081 aa21.52■■□□□ 1.04
HLA-DQB1-204ENST00000399084 SUCLG2Q96I99 432 aa21.52■■□□□ 1.04
HLA-DQB1-204ENST00000399084 USP16Q9Y5T5 823 aa21.52■■□□□ 1.04
HLA-DQB1-204ENST00000399084 KAZALD1Q96I82 304 aa21.52■■□□□ 1.03
HLA-DQB1-204ENST00000399084 BICC1Q9H694 974 aaKnown RBP21.52■■□□□ 1.03
HLA-DQB1-204ENST00000399084 MYL6BP14649 208 aa21.51■■□□□ 1.03
HLA-DQB1-204ENST00000399084 HSPA4P34932 840 aa21.51■■□□□ 1.03
HLA-DQB1-204ENST00000399084 ILDR2Q71H61 639 aa21.51■■□□□ 1.03
HLA-DQB1-204ENST00000399084 EVI5LQ96CN4 794 aa21.51■■□□□ 1.03
HLA-DQB1-204ENST00000399084 INTS4Q96HW7 963 aaKnown RBP21.51■■□□□ 1.03
HLA-DQB1-204ENST00000399084 AK9Q5TCS8 1911 aa21.51■■□□□ 1.03
HLA-DQB1-204ENST00000399084 KIAA1211Q6ZU35 1233 aa21.5■■□□□ 1.03
HLA-DQB1-204ENST00000399084 UNC5CLQ8IV45 518 aa21.5■■□□□ 1.03
HLA-DQB1-204ENST00000399084 COPRSQ9NQ92 184 aa21.5■■□□□ 1.03
HLA-DQB1-204ENST00000399084 NEK4P51957 841 aa21.49■■□□□ 1.03
HLA-DQB1-204ENST00000399084 RABL6Q3YEC7 729 aaPredicted RBP21.49■■□□□ 1.03
HLA-DQB1-204ENST00000399084 TICAM2Q86XR7 235 aa21.49■■□□□ 1.03
HLA-DQB1-204ENST00000399084 RAD50Q92878 1312 aa21.49■■□□□ 1.03
HLA-DQB1-204ENST00000399084 MYD88Q99836 296 aa21.49■■□□□ 1.03
HLA-DQB1-204ENST00000399084 NHSL1Q5SYE7 1610 aa21.48■■□□□ 1.03
HLA-DQB1-204ENST00000399084 SOCS7O14512 581 aa21.48■■□□□ 1.03
HLA-DQB1-204ENST00000399084 ZNF335Q9H4Z2 1342 aaPredicted RBP21.47■■□□□ 1.03
HLA-DQB1-204ENST00000399084 CUL4AQ13619 759 aa21.47■■□□□ 1.03
HLA-DQB1-204ENST00000399084 TEX13AQ9BXU3 409 aaPredicted RBP21.47■■□□□ 1.03
HLA-DQB1-204ENST00000399084 UBR2Q8IWV8 1755 aa21.47■■□□□ 1.03
HLA-DQB1-204ENST00000399084 ABCA3Q99758 1704 aa21.46■■□□□ 1.03
HLA-DQB1-204ENST00000399084 CYP2E1P05181 493 aaPredicted RBP21.46■■□□□ 1.03
HLA-DQB1-204ENST00000399084 EVA1CP58658 441 aa21.46■■□□□ 1.03
HLA-DQB1-204ENST00000399084 SASH1O94885 1247 aa21.46■■□□□ 1.03
HLA-DQB1-204ENST00000399084 AACSQ86V21 672 aa21.46■■□□□ 1.03
HLA-DQB1-204ENST00000399084 DIAPH3Q9NSV4 1193 aa21.46■■□□□ 1.03
HLA-DQB1-204ENST00000399084 TNS2Q63HR2 1409 aa21.44■■□□□ 1.02
HLA-DQB1-204ENST00000399084 GLI3P10071 1580 aa21.44■■□□□ 1.02
HLA-DQB1-204ENST00000399084 TMX3Q96JJ7 454 aa21.43■■□□□ 1.02
HLA-DQB1-204ENST00000399084 LSG1Q9H089 658 aaKnown RBP21.43■■□□□ 1.02
HLA-DQB1-204ENST00000399084 SNRKQ9NRH2 765 aa21.43■■□□□ 1.02
HLA-DQB1-204ENST00000399084 PA2G4Q9UQ80 394 aaKnown RBP21.43■■□□□ 1.02
HLA-DQB1-204ENST00000399084 PAPPAQ13219 1627 aa21.43■■□□□ 1.02
HLA-DQB1-204ENST00000399084 VSIG10Q8N0Z9 540 aa21.43■■□□□ 1.02
HLA-DQB1-204ENST00000399084 ARFGEF2Q9Y6D5 1785 aa21.42■■□□□ 1.02
HLA-DQB1-204ENST00000399084 H7C1W4 665 aa21.42■■□□□ 1.02
HLA-DQB1-204ENST00000399084 CCDC191Q8NCU4 936 aa21.41■■□□□ 1.02
HLA-DQB1-204ENST00000399084 KCNB2Q92953 911 aa21.41■■□□□ 1.02
HLA-DQB1-204ENST00000399084 EAF2Q96CJ1 260 aaPredicted RBP21.41■■□□□ 1.02
HLA-DQB1-204ENST00000399084 TM6SF1Q9BZW5 370 aa21.41■■□□□ 1.02
HLA-DQB1-204ENST00000399084 A0A087WZG4 1122 aa21.41■■□□□ 1.02
HLA-DQB1-204ENST00000399084 FSD2A1L4K1 749 aa21.41■■□□□ 1.02
HLA-DQB1-204ENST00000399084 GOLGA6L3A6NEY3 463 aa21.41■■□□□ 1.02
HLA-DQB1-204ENST00000399084 BAG4O95429 457 aaKnown RBP21.41■■□□□ 1.02
HLA-DQB1-204ENST00000399084 ATG3Q9NT62 314 aa21.41■■□□□ 1.02
HLA-DQB1-204ENST00000399084 FOXD4L1Q9NU39 408 aa21.41■■□□□ 1.02
HLA-DQB1-204ENST00000399084 KCPQ6ZWJ8 1503 aa21.4■■□□□ 1.02
HLA-DQB1-204ENST00000399084 SSFA2P28290 1259 aa21.4■■□□□ 1.02
HLA-DQB1-204ENST00000399084 RFX5P48382 616 aaPredicted RBP21.4■■□□□ 1.02
HLA-DQB1-204ENST00000399084 CASP7P55210 303 aa21.4■■□□□ 1.02
HLA-DQB1-204ENST00000399084 PALD1Q9ULE6 856 aa21.4■■□□□ 1.02
HLA-DQB1-204ENST00000399084 RFX7Q2KHR2 1363 aa21.4■■□□□ 1.02
HLA-DQB1-204ENST00000399084 GPR108Q9NPR9 543 aa21.39■■□□□ 1.01
HLA-DQB1-204ENST00000399084 CWC25Q9NXE8 425 aaPredicted RBP21.39■■□□□ 1.01
HLA-DQB1-204ENST00000399084 AFDNP55196 1824 aaKnown RBP21.38■■□□□ 1.01
HLA-DQB1-204ENST00000399084 NBPF26B4DH59 902 aa21.38■■□□□ 1.01
HLA-DQB1-204ENST00000399084 NBPF14Q5TI25 921 aa21.38■■□□□ 1.01
HLA-DQB1-204ENST00000399084 NBPF10Q6P3W6 841 aaKnown RBP21.38■■□□□ 1.01
HLA-DQB1-204ENST00000399084 CWC27Q6UX04 472 aaKnown RBP21.38■■□□□ 1.01
HLA-DQB1-204ENST00000399084 UBE3BQ7Z3V4 1068 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms