RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 COPS6Q7L5N1 327 aa15.97■□□□□ 0.15
HLA-DQB1-203ENST00000399082 SSH1Q8WYL5 1049 aa15.97■□□□□ 0.15
HLA-DQB1-203ENST00000399082 ARFGEF2Q9Y6D5 1785 aa15.97■□□□□ 0.15
HLA-DQB1-203ENST00000399082 NUP98P52948 1817 aa15.96■□□□□ 0.15
HLA-DQB1-203ENST00000399082 A0A087WZG4 1122 aa15.96■□□□□ 0.15
HLA-DQB1-203ENST00000399082 CT47B1P0C2W7 299 aaPredicted RBP15.96■□□□□ 0.15
HLA-DQB1-203ENST00000399082 FKBP8Q14318 412 aa15.96■□□□□ 0.15
HLA-DQB1-203ENST00000399082 MSL1Q68DK7 614 aa15.96■□□□□ 0.15
HLA-DQB1-203ENST00000399082 SGIP1Q9BQI5 828 aa15.96■□□□□ 0.15
HLA-DQB1-203ENST00000399082 HYPKQ9NX55 129 aa15.96■□□□□ 0.15
HLA-DQB1-203ENST00000399082 MAP3K15Q6ZN16 1313 aa15.95■□□□□ 0.14
HLA-DQB1-203ENST00000399082 SLC4A2P04920 1241 aa15.95■□□□□ 0.14
HLA-DQB1-203ENST00000399082 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB1-203ENST00000399082 AIMP1Q12904 312 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB1-203ENST00000399082 HLFQ16534 295 aa15.95■□□□□ 0.14
HLA-DQB1-203ENST00000399082 MRPL50Q8N5N7 158 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB1-203ENST00000399082 SLC16A10Q8TF71 515 aa15.95■□□□□ 0.14
HLA-DQB1-203ENST00000399082 BCL2L13Q9BXK5 485 aa15.95■□□□□ 0.14
HLA-DQB1-203ENST00000399082 ZNF428Q96B54 188 aa15.94■□□□□ 0.14
HLA-DQB1-203ENST00000399082 STK31Q9BXU1 1019 aa15.94■□□□□ 0.14
HLA-DQB1-203ENST00000399082 MTFR1LQ9H019 292 aa15.94■□□□□ 0.14
HLA-DQB1-203ENST00000399082 ZBTB3Q9H5J0 574 aa15.94■□□□□ 0.14
HLA-DQB1-203ENST00000399082 ADCY9O60503 1353 aa15.94■□□□□ 0.14
HLA-DQB1-203ENST00000399082 ANKRD36CQ5JPF3 1778 aa15.93■□□□□ 0.14
HLA-DQB1-203ENST00000399082 ZPR1O75312 459 aa15.93■□□□□ 0.14
HLA-DQB1-203ENST00000399082 PTGER2P43116 358 aa15.93■□□□□ 0.14
HLA-DQB1-203ENST00000399082 ALDH1L2Q3SY69 923 aa15.93■□□□□ 0.14
HLA-DQB1-203ENST00000399082 CHMP4AQ9BY43 222 aa15.93■□□□□ 0.14
HLA-DQB1-203ENST00000399082 ATF5Q9Y2D1 282 aaPredicted RBP15.93■□□□□ 0.14
HLA-DQB1-203ENST00000399082 ERVV-1B6SEH8 477 aa15.92■□□□□ 0.14
HLA-DQB1-203ENST00000399082 DDR1Q08345 913 aa15.92■□□□□ 0.14
HLA-DQB1-203ENST00000399082 FLIIQ13045 1269 aa15.92■□□□□ 0.14
HLA-DQB1-203ENST00000399082 TBC1D9BQ66K14 1250 aa15.92■□□□□ 0.14
HLA-DQB1-203ENST00000399082 ARXQ96QS3 562 aa15.92■□□□□ 0.14
HLA-DQB1-203ENST00000399082 ATP10DQ9P241 1426 aa15.92■□□□□ 0.14
HLA-DQB1-203ENST00000399082 NRXN2Q9P2S2 1712 aa15.91■□□□□ 0.14
HLA-DQB1-203ENST00000399082 LRP5O75197 1615 aa15.91■□□□□ 0.14
HLA-DQB1-203ENST00000399082 RGL2O15211 777 aa15.91■□□□□ 0.14
HLA-DQB1-203ENST00000399082 TM4SF1P30408 202 aa15.91■□□□□ 0.14
HLA-DQB1-203ENST00000399082 NFIXQ14938 502 aa15.91■□□□□ 0.14
HLA-DQB1-203ENST00000399082 GIGYF2Q6Y7W6 1299 aaKnown RBP15.91■□□□□ 0.14
HLA-DQB1-203ENST00000399082 KIF6Q6ZMV9 814 aa15.91■□□□□ 0.14
HLA-DQB1-203ENST00000399082 PLBD2Q8NHP8 589 aa15.91■□□□□ 0.14
HLA-DQB1-203ENST00000399082 AFDNP55196 1824 aaKnown RBP15.9■□□□□ 0.14
HLA-DQB1-203ENST00000399082 BCAR3O75815 825 aa15.9■□□□□ 0.14
HLA-DQB1-203ENST00000399082 BRPF1P55201 1214 aaPredicted RBP15.9■□□□□ 0.14
HLA-DQB1-203ENST00000399082 CLEC4GQ6UXB4 293 aa15.9■□□□□ 0.14
HLA-DQB1-203ENST00000399082 ANKRD13DQ6ZTN6 518 aa15.9■□□□□ 0.14
HLA-DQB1-203ENST00000399082 NPM2Q86SE8 214 aaKnown RBP15.9■□□□□ 0.14
HLA-DQB1-203ENST00000399082 NLGN1Q8N2Q7 840 aa15.9■□□□□ 0.14
HLA-DQB1-203ENST00000399082 SMC4Q9NTJ3 1288 aa15.9■□□□□ 0.14
HLA-DQB1-203ENST00000399082 UBN2Q6ZU65 1347 aa15.9■□□□□ 0.14
HLA-DQB1-203ENST00000399082 MMP10P09238 476 aa15.89■□□□□ 0.13
HLA-DQB1-203ENST00000399082 PI4KAP2A4QPH2 592 aa15.88■□□□□ 0.13
HLA-DQB1-203ENST00000399082 POLRMTO00411 1230 aaKnown RBP15.88■□□□□ 0.13
HLA-DQB1-203ENST00000399082 KSR2Q6VAB6 950 aa15.88■□□□□ 0.13
HLA-DQB1-203ENST00000399082 ZNF34Q8IZ26 560 aa15.88■□□□□ 0.13
HLA-DQB1-203ENST00000399082 PI4KAP1Q8N8J0 262 aa15.88■□□□□ 0.13
HLA-DQB1-203ENST00000399082 FKBP5Q13451 457 aaPredicted RBP15.87■□□□□ 0.13
HLA-DQB1-203ENST00000399082 BICDL1Q6ZP65 573 aa15.87■□□□□ 0.13
HLA-DQB1-203ENST00000399082 SPON1Q9HCB6 807 aa15.87■□□□□ 0.13
HLA-DQB1-203ENST00000399082 MAP3K2Q9Y2U5 619 aa15.87■□□□□ 0.13
HLA-DQB1-203ENST00000399082 F6X3S4 739 aa15.86■□□□□ 0.13
HLA-DQB1-203ENST00000399082 GPTP24298 496 aa15.86■□□□□ 0.13
HLA-DQB1-203ENST00000399082 DSG3P32926 999 aa15.86■□□□□ 0.13
HLA-DQB1-203ENST00000399082 TCIRG1Q13488 830 aa15.86■□□□□ 0.13
HLA-DQB1-203ENST00000399082 RIC3Q7Z5B4 369 aa15.86■□□□□ 0.13
HLA-DQB1-203ENST00000399082 ISCA1Q9BUE6 129 aa15.86■□□□□ 0.13
HLA-DQB1-203ENST00000399082 ZNF652Q9Y2D9 606 aa15.86■□□□□ 0.13
HLA-DQB1-203ENST00000399082 N4BP2Q86UW6 1770 aaPredicted RBP15.85■□□□□ 0.13
HLA-DQB1-203ENST00000399082 DDX58O95786 925 aaKnown RBP15.85■□□□□ 0.13
HLA-DQB1-203ENST00000399082 IGKV5-2P06315 115 aa15.85■□□□□ 0.13
HLA-DQB1-203ENST00000399082 METTL22Q9BUU2 404 aaPredicted RBP15.85■□□□□ 0.13
HLA-DQB1-203ENST00000399082 NOB1Q9ULX3 412 aaKnown RBP15.85■□□□□ 0.13
HLA-DQB1-203ENST00000399082 TNNQ9UQP3 1299 aa15.85■□□□□ 0.13
HLA-DQB1-203ENST00000399082 NIP7Q9Y221 180 aaKnown RBP eCLIP15.85■□□□□ 0.13
HLA-DQB1-203ENST00000399082 PTPRCP08575 1304 aa15.85■□□□□ 0.13
HLA-DQB1-203ENST00000399082 CARMIL3Q8ND23 1372 aa15.85■□□□□ 0.13
HLA-DQB1-203ENST00000399082 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
HLA-DQB1-203ENST00000399082 ANKRD31Q8N7Z5 1873 aa15.84■□□□□ 0.13
HLA-DQB1-203ENST00000399082 ATP5J2-PTCD1G3V325 749 aa15.84■□□□□ 0.13
HLA-DQB1-203ENST00000399082 NLRP10Q86W26 655 aa15.84■□□□□ 0.13
HLA-DQB1-203ENST00000399082 DNAAF4Q8WXU2 420 aa15.84■□□□□ 0.13
HLA-DQB1-203ENST00000399082 MYD88Q99836 296 aa15.84■□□□□ 0.13
HLA-DQB1-203ENST00000399082 RCAN3Q9UKA8 241 aa15.84■□□□□ 0.13
HLA-DQB1-203ENST00000399082 KIAA1551Q9HCM1 1747 aa15.84■□□□□ 0.13
HLA-DQB1-203ENST00000399082 C10orf71Q711Q0 1435 aa15.84■□□□□ 0.13
HLA-DQB1-203ENST00000399082 SERPINB2P05120 415 aa15.83■□□□□ 0.12
HLA-DQB1-203ENST00000399082 TRIM28Q13263 835 aaKnown RBP15.83■□□□□ 0.12
HLA-DQB1-203ENST00000399082 SUSD4Q5VX71 490 aa15.83■□□□□ 0.12
HLA-DQB1-203ENST00000399082 SETDB2Q96T68 719 aa15.83■□□□□ 0.12
HLA-DQB1-203ENST00000399082 KIF16BQ96L93 1317 aa15.83■□□□□ 0.12
HLA-DQB1-203ENST00000399082 PXDNLA1KZ92 1463 aa15.83■□□□□ 0.12
HLA-DQB1-203ENST00000399082 TNRC6CQ9HCJ0 1690 aaKnown RBP15.83■□□□□ 0.12
HLA-DQB1-203ENST00000399082 NTSR2O95665 410 aa15.82■□□□□ 0.12
HLA-DQB1-203ENST00000399082 POLD1P28340 1107 aa15.82■□□□□ 0.12
HLA-DQB1-203ENST00000399082 HSP90AB3PQ58FF7 597 aa15.82■□□□□ 0.12
HLA-DQB1-203ENST00000399082 BEND3Q5T5X7 828 aa15.82■□□□□ 0.12
HLA-DQB1-203ENST00000399082 PRR5LQ6MZQ0 368 aa15.82■□□□□ 0.12
HLA-DQB1-203ENST00000399082 ABCC12Q96J65 1359 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms