RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 CCDC70Q6NSX1 233 aa17.14■□□□□ 0.33
RPRD1A-202ENST00000399022 PTGS1P23219 599 aa17.14■□□□□ 0.33
RPRD1A-202ENST00000399022 ZSCAN31Q96LW9 406 aaPredicted RBP17.14■□□□□ 0.33
RPRD1A-202ENST00000399022 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.33
RPRD1A-202ENST00000399022 CHD1O14646 1710 aa17.13■□□□□ 0.33
RPRD1A-202ENST00000399022 ZFP91Q96JP5 570 aaPredicted RBP17.13■□□□□ 0.33
RPRD1A-202ENST00000399022 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
RPRD1A-202ENST00000399022 FKBP4Q02790 459 aaKnown RBP eCLIP17.13■□□□□ 0.33
RPRD1A-202ENST00000399022 LIMCH1Q9UPQ0 1083 aa17.13■□□□□ 0.33
RPRD1A-202ENST00000399022 KCNA6P17658 529 aa17.12■□□□□ 0.33
RPRD1A-202ENST00000399022 AMOTQ4VCS5 1084 aa17.12■□□□□ 0.33
RPRD1A-202ENST00000399022 RASSF8Q8NHQ8 419 aa17.12■□□□□ 0.33
RPRD1A-202ENST00000399022 OLFM4Q6UX06 510 aa17.12■□□□□ 0.33
RPRD1A-202ENST00000399022 TTC21AQ8NDW8 1320 aa17.12■□□□□ 0.33
RPRD1A-202ENST00000399022 RHPN1Q8TCX5 695 aa17.12■□□□□ 0.33
RPRD1A-202ENST00000399022 STK38Q15208 465 aa17.12■□□□□ 0.33
RPRD1A-202ENST00000399022 DMTNQ08495 405 aa17.11■□□□□ 0.33
RPRD1A-202ENST00000399022 DDX11Q96FC9 970 aa17.11■□□□□ 0.33
RPRD1A-202ENST00000399022 PLEKHF1Q96S99 279 aa17.11■□□□□ 0.33
RPRD1A-202ENST00000399022 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
RPRD1A-202ENST00000399022 TRIM29Q14134 588 aa17.11■□□□□ 0.33
RPRD1A-202ENST00000399022 CHRNA2Q15822 529 aa17.11■□□□□ 0.33
RPRD1A-202ENST00000399022 LARP1Q6PKG0 1096 aaKnown RBP17.11■□□□□ 0.33
RPRD1A-202ENST00000399022 SCAND2PQ9GZW5 306 aaPredicted RBP17.11■□□□□ 0.33
RPRD1A-202ENST00000399022 PHAXQ9H814 394 aaKnown RBP17.11■□□□□ 0.33
RPRD1A-202ENST00000399022 PIK3R4Q99570 1358 aa17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 AXDND1Q5T1B0 1012 aaPredicted RBP17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 ZCCHC11Q5TAX3 1644 aaKnown RBP17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 FLT4P35916 1363 aa17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 ATP5J2-PTCD1G3V325 749 aa17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 AKAP17AQ02040 695 aaKnown RBP17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 ANKRD24Q8TF21 1146 aa17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 IPO7O95373 1038 aaKnown RBP17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 ZSCAN22P10073 491 aaPredicted RBP17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 FAM200AQ8TCP9 573 aa17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 CHAMP1Q96JM3 812 aa17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 PIP4K2AP48426 406 aaPredicted RBP17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 KRT28Q7Z3Y7 464 aa17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 ERCC4Q92889 916 aaPredicted RBP17.1■□□□□ 0.33
RPRD1A-202ENST00000399022 SYNMO15061 1565 aa17.09■□□□□ 0.33
RPRD1A-202ENST00000399022 PKP1Q13835 747 aa17.09■□□□□ 0.33
RPRD1A-202ENST00000399022 MSH6P52701 1360 aa17.09■□□□□ 0.33
RPRD1A-202ENST00000399022 ZNF396Q96N95 335 aaPredicted RBP17.09■□□□□ 0.33
RPRD1A-202ENST00000399022 RUFY1Q96T51 708 aa17.09■□□□□ 0.33
RPRD1A-202ENST00000399022 CFAP45Q9UL16 551 aa17.09■□□□□ 0.33
RPRD1A-202ENST00000399022 TRPM1Q7Z4N2 1603 aa17.09■□□□□ 0.33
RPRD1A-202ENST00000399022 TRIM34Q9BYJ4 488 aa17.09■□□□□ 0.33
RPRD1A-202ENST00000399022 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
RPRD1A-202ENST00000399022 EDC4Q6P2E9 1401 aaKnown RBP17.08■□□□□ 0.33
RPRD1A-202ENST00000399022 EIF3JO75822 258 aaKnown RBP17.08■□□□□ 0.33
RPRD1A-202ENST00000399022 GJB2P29033 226 aa17.08■□□□□ 0.33
RPRD1A-202ENST00000399022 ATP8B2P98198 1209 aa17.08■□□□□ 0.33
RPRD1A-202ENST00000399022 VPS37DQ86XT2 251 aa17.08■□□□□ 0.33
RPRD1A-202ENST00000399022 CHL1O00533 1208 aa17.08■□□□□ 0.32
RPRD1A-202ENST00000399022 STK11IPQ8N1F8 1099 aa17.08■□□□□ 0.32
RPRD1A-202ENST00000399022 SKILP12757 684 aa17.08■□□□□ 0.32
RPRD1A-202ENST00000399022 SNW1Q13573 536 aaKnown RBP17.08■□□□□ 0.32
RPRD1A-202ENST00000399022 ESYT1Q9BSJ8 1104 aa17.08■□□□□ 0.32
RPRD1A-202ENST00000399022 CNNM1Q9NRU3 951 aa17.08■□□□□ 0.32
RPRD1A-202ENST00000399022 SMTNL1A8MU46 457 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 PATL2C9JE40 543 aaKnown RBP17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 ANKRD1Q15327 319 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 NEMFO60524 1076 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 ATP2B1P20020 1258 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 LMAN1P49257 510 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 CCDC57Q2TAC2 916 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 TTC39AQ5SRH9 613 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 PA2G4Q9UQ80 394 aaKnown RBP17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 ERLIN1O75477 346 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 RDXP35241 583 aaKnown RBP17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 ANO6Q4KMQ2 910 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 ZNF397Q8NF99 534 aaPredicted RBP17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 DDX19AQ9NUU7 478 aaKnown RBP17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 CEP126Q9P2H0 1117 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 A0A087WZG4 1122 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 CCDC158Q5M9N0 1113 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 KIF6Q6ZMV9 814 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 TCEANC2Q96MN5 208 aa17.07■□□□□ 0.32
RPRD1A-202ENST00000399022 DNM1Q05193 864 aaKnown RBP17.06■□□□□ 0.32
RPRD1A-202ENST00000399022 ZFYVE16Q7Z3T8 1539 aa17.06■□□□□ 0.32
RPRD1A-202ENST00000399022 UBE3BQ7Z3V4 1068 aa17.06■□□□□ 0.32
RPRD1A-202ENST00000399022 CD2BP2O95400 341 aaKnown RBP17.06■□□□□ 0.32
RPRD1A-202ENST00000399022 GPATCH11Q8N954 259 aa17.06■□□□□ 0.32
RPRD1A-202ENST00000399022 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
RPRD1A-202ENST00000399022 MYOM2P54296 1465 aa17.06■□□□□ 0.32
RPRD1A-202ENST00000399022 IQGAP3Q86VI3 1631 aa17.05■□□□□ 0.32
RPRD1A-202ENST00000399022 HOXC9P31274 260 aa17.05■□□□□ 0.32
RPRD1A-202ENST00000399022 DHX8Q14562 1220 aaKnown RBP17.05■□□□□ 0.32
RPRD1A-202ENST00000399022 CFAP100Q494V2 611 aa17.05■□□□□ 0.32
RPRD1A-202ENST00000399022 RRP12Q5JTH9 1297 aaKnown RBP17.05■□□□□ 0.32
RPRD1A-202ENST00000399022 ANO10Q9NW15 660 aa17.05■□□□□ 0.32
RPRD1A-202ENST00000399022 PPFIA3O75145 1194 aa17.05■□□□□ 0.32
RPRD1A-202ENST00000399022 BRPF1P55201 1214 aaPredicted RBP17.05■□□□□ 0.32
RPRD1A-202ENST00000399022 CWF19L2Q2TBE0 894 aaKnown RBP17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 ZBTB3Q9H5J0 574 aa17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 CDC42BPBQ9Y5S2 1711 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms