RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 LIMCH1Q9UPQ0 1083 aa23.51■■□□□ 1.35
COL13A1-205ENST00000398978 MARF1Q9Y4F3 1742 aaKnown RBP23.51■■□□□ 1.35
COL13A1-205ENST00000398978 STX6O43752 255 aa23.51■■□□□ 1.35
COL13A1-205ENST00000398978 PLCB2Q00722 1185 aa23.51■■□□□ 1.35
COL13A1-205ENST00000398978 USP25Q9UHP3 1055 aa23.51■■□□□ 1.35
COL13A1-205ENST00000398978 CACNA1FO60840 1977 aa23.5■■□□□ 1.35
COL13A1-205ENST00000398978 FAM227BQ96M60 508 aa23.5■■□□□ 1.35
COL13A1-205ENST00000398978 CHMP3Q9Y3E7 222 aa23.5■■□□□ 1.35
COL13A1-205ENST00000398978 IFIT2P09913 472 aaKnown RBP23.5■■□□□ 1.35
COL13A1-205ENST00000398978 ZSCAN22P10073 491 aaPredicted RBP23.5■■□□□ 1.35
COL13A1-205ENST00000398978 ARID3AQ99856 593 aa23.5■■□□□ 1.35
COL13A1-205ENST00000398978 HCLS1P14317 486 aaPredicted RBP23.49■■□□□ 1.35
COL13A1-205ENST00000398978 PXDNLA1KZ92 1463 aa23.49■■□□□ 1.35
COL13A1-205ENST00000398978 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.49■■□□□ 1.35
COL13A1-205ENST00000398978 BABAM1Q9NWV8 329 aa23.49■■□□□ 1.35
COL13A1-205ENST00000398978 TLR7Q9NYK1 1049 aaKnown RBP23.49■■□□□ 1.35
COL13A1-205ENST00000398978 GJB2P29033 226 aa23.48■■□□□ 1.35
COL13A1-205ENST00000398978 SYAP1Q96A49 352 aaPredicted RBP23.48■■□□□ 1.35
COL13A1-205ENST00000398978 VPS37CA5D8V6 355 aaPredicted RBP23.48■■□□□ 1.35
COL13A1-205ENST00000398978 GLRX3O76003 335 aaKnown RBP23.48■■□□□ 1.35
COL13A1-205ENST00000398978 DNM1Q05193 864 aaKnown RBP23.48■■□□□ 1.35
COL13A1-205ENST00000398978 PIP4K2AP48426 406 aaPredicted RBP23.48■■□□□ 1.35
COL13A1-205ENST00000398978 RGPD2P0DJD1 1756 aa23.48■■□□□ 1.35
COL13A1-205ENST00000398978 KCNJ4P48050 445 aa23.47■■□□□ 1.35
COL13A1-205ENST00000398978 PDRG1Q9NUG6 133 aa23.47■■□□□ 1.35
COL13A1-205ENST00000398978 HYPKQ9NX55 129 aa23.47■■□□□ 1.35
COL13A1-205ENST00000398978 TPM2P07951 284 aa23.47■■□□□ 1.35
COL13A1-205ENST00000398978 FAM173BQ6P4H8 233 aa23.47■■□□□ 1.35
COL13A1-205ENST00000398978 SLC39A6Q13433 755 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 GIMAP6Q6P9H5 292 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 C17orf53Q8N3J3 647 aaPredicted RBP23.46■■□□□ 1.35
COL13A1-205ENST00000398978 SUCLG2Q96I99 432 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 ECHDC1Q9NTX5 307 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 RNMTO43148 476 aaKnown RBP23.46■■□□□ 1.35
COL13A1-205ENST00000398978 FERMT3Q86UX7 667 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 DBF4Q9UBU7 674 aaPredicted RBP23.46■■□□□ 1.35
COL13A1-205ENST00000398978 TAF6LQ9Y6J9 622 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 ARHGAP23Q9P227 1491 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 LTN1O94822 1766 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 RRP9O43818 475 aaKnown RBP23.46■■□□□ 1.35
COL13A1-205ENST00000398978 F13A1P00488 732 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 HS1BP3Q53T59 392 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 C1orf141Q5JVX7 400 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 ORAI2Q96SN7 254 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 BOLA2Q9H3K6 86 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 CCDC39Q9UFE4 941 aa23.46■■□□□ 1.35
COL13A1-205ENST00000398978 AKAP4Q5JQC9 854 aa23.45■■□□□ 1.34
COL13A1-205ENST00000398978 EDC3Q96F86 508 aaKnown RBP23.45■■□□□ 1.34
COL13A1-205ENST00000398978 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.45■■□□□ 1.34
COL13A1-205ENST00000398978 PXDNQ92626 1479 aa23.45■■□□□ 1.34
COL13A1-205ENST00000398978 ST3GAL1Q11201 340 aa23.45■■□□□ 1.34
COL13A1-205ENST00000398978 IL17RAQ96F46 866 aa23.45■■□□□ 1.34
COL13A1-205ENST00000398978 BICC1Q9H694 974 aaKnown RBP23.45■■□□□ 1.34
COL13A1-205ENST00000398978 FAM13BQ9NYF5 915 aa23.45■■□□□ 1.34
COL13A1-205ENST00000398978 NDUFB9Q9Y6M9 179 aa23.45■■□□□ 1.34
COL13A1-205ENST00000398978 SLIT1O75093 1534 aa23.44■■□□□ 1.34
COL13A1-205ENST00000398978 ZNF500O60304 480 aaPredicted RBP23.44■■□□□ 1.34
COL13A1-205ENST00000398978 GIGYF1O75420 1035 aaPredicted RBP23.44■■□□□ 1.34
COL13A1-205ENST00000398978 MYL6BP14649 208 aa23.44■■□□□ 1.34
COL13A1-205ENST00000398978 PLEKHO1Q53GL0 409 aaPredicted RBP23.44■■□□□ 1.34
COL13A1-205ENST00000398978 EAF2Q96CJ1 260 aaPredicted RBP23.44■■□□□ 1.34
COL13A1-205ENST00000398978 ME3Q16798 604 aa23.44■■□□□ 1.34
COL13A1-205ENST00000398978 HSP90AB4PQ58FF6 505 aa23.44■■□□□ 1.34
COL13A1-205ENST00000398978 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.44■■□□□ 1.34
COL13A1-205ENST00000398978 SASH1O94885 1247 aa23.43■■□□□ 1.34
COL13A1-205ENST00000398978 NMIQ13287 307 aaPredicted RBP23.43■■□□□ 1.34
COL13A1-205ENST00000398978 KAZALD1Q96I82 304 aa23.43■■□□□ 1.34
COL13A1-205ENST00000398978 CCDC9Q9Y3X0 531 aaKnown RBP23.43■■□□□ 1.34
COL13A1-205ENST00000398978 RBM8AQ9Y5S9 174 aaKnown RBP23.43■■□□□ 1.34
COL13A1-205ENST00000398978 CHGBP05060 677 aa23.42■■□□□ 1.34
COL13A1-205ENST00000398978 KSR2Q6VAB6 950 aa23.42■■□□□ 1.34
COL13A1-205ENST00000398978 AXIN2Q9Y2T1 843 aa23.42■■□□□ 1.34
COL13A1-205ENST00000398978 ANKARQ7Z5J8 1434 aa23.42■■□□□ 1.34
COL13A1-205ENST00000398978 TTC12Q9H892 705 aaPredicted RBP23.42■■□□□ 1.34
COL13A1-205ENST00000398978 UQCRHLA0A096LP55 91 aa23.41■■□□□ 1.34
COL13A1-205ENST00000398978 UQCRHP07919 91 aa23.41■■□□□ 1.34
COL13A1-205ENST00000398978 CCDC183Q5T5S1 534 aa23.41■■□□□ 1.34
COL13A1-205ENST00000398978 TTC41PQ6P2S7 1318 aa23.41■■□□□ 1.34
COL13A1-205ENST00000398978 VSIG10Q8N0Z9 540 aa23.41■■□□□ 1.34
COL13A1-205ENST00000398978 TPCN1Q9ULQ1 816 aa23.41■■□□□ 1.34
COL13A1-205ENST00000398978 MTMR6Q9Y217 621 aa23.41■■□□□ 1.34
COL13A1-205ENST00000398978 CYP46A1Q9Y6A2 500 aa23.41■■□□□ 1.34
COL13A1-205ENST00000398978 STK3Q13188 491 aa23.41■■□□□ 1.34
COL13A1-205ENST00000398978 ANKRD24Q8TF21 1146 aa23.41■■□□□ 1.34
COL13A1-205ENST00000398978 GCP02774 474 aa23.4■■□□□ 1.34
COL13A1-205ENST00000398978 RUFY2Q8WXA3 655 aa23.4■■□□□ 1.34
COL13A1-205ENST00000398978 A0A0D9SFI3 127 aa23.4■■□□□ 1.34
COL13A1-205ENST00000398978 PHF14O94880 888 aa23.4■■□□□ 1.34
COL13A1-205ENST00000398978 ADCY5O95622 1261 aa23.39■■□□□ 1.34
COL13A1-205ENST00000398978 G3BP1Q13283 466 aaKnown RBP eCLIP23.39■■□□□ 1.33
COL13A1-205ENST00000398978 CREB3L3Q68CJ9 461 aa23.39■■□□□ 1.33
COL13A1-205ENST00000398978 CCDC171Q6TFL3 1326 aa23.39■■□□□ 1.33
COL13A1-205ENST00000398978 HOXB7P09629 217 aa23.39■■□□□ 1.33
COL13A1-205ENST00000398978 UBE2HP62256 183 aa23.39■■□□□ 1.33
COL13A1-205ENST00000398978 GRM8O00222 908 aa23.38■■□□□ 1.33
COL13A1-205ENST00000398978 ZC3H6P61129 1189 aaKnown RBP23.38■■□□□ 1.33
COL13A1-205ENST00000398978 NECTIN1Q15223 517 aa23.38■■□□□ 1.33
COL13A1-205ENST00000398978 DNTTIP2Q5QJE6 756 aaKnown RBP23.38■■□□□ 1.33
COL13A1-205ENST00000398978 GPATCH3Q96I76 525 aa23.38■■□□□ 1.33
COL13A1-205ENST00000398978 FSD1Q9BTV5 496 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms