RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 CCDC24Q8N4L8 307 aa18.86■□□□□ 0.61
COL13A1-204ENST00000398975 UTRNP46939 3433 aa18.86■□□□□ 0.61
COL13A1-204ENST00000398975 CHD4Q14839 1912 aa18.85■□□□□ 0.61
COL13A1-204ENST00000398975 GNAI1P63096 354 aa18.85■□□□□ 0.61
COL13A1-204ENST00000398975 NPM2Q86SE8 214 aaKnown RBP18.85■□□□□ 0.61
COL13A1-204ENST00000398975 DLEC1Q9Y238 1755 aa18.84■□□□□ 0.61
COL13A1-204ENST00000398975 MAP3K15Q6ZN16 1313 aa18.84■□□□□ 0.61
COL13A1-204ENST00000398975 COL11A2P13942 1736 aaPredicted RBP18.84■□□□□ 0.61
COL13A1-204ENST00000398975 DUSP27Q5VZP5 1158 aa18.84■□□□□ 0.61
COL13A1-204ENST00000398975 PRR5LQ6MZQ0 368 aa18.84■□□□□ 0.61
COL13A1-204ENST00000398975 CLEC4GQ6UXB4 293 aa18.84■□□□□ 0.61
COL13A1-204ENST00000398975 C8orf58Q8NAV2 365 aa18.84■□□□□ 0.61
COL13A1-204ENST00000398975 SALL2Q9Y467 1007 aaPredicted RBP18.84■□□□□ 0.61
COL13A1-204ENST00000398975 CALD1Q05682 793 aaKnown RBP18.83■□□□□ 0.6
COL13A1-204ENST00000398975 NCBP3Q53F19 620 aaKnown RBP18.83■□□□□ 0.6
COL13A1-204ENST00000398975 TSR2Q969E8 191 aaKnown RBP18.83■□□□□ 0.6
COL13A1-204ENST00000398975 SETDB2Q96T68 719 aa18.83■□□□□ 0.6
COL13A1-204ENST00000398975 ZBTB3Q9H5J0 574 aa18.83■□□□□ 0.6
COL13A1-204ENST00000398975 CHPF2Q9P2E5 772 aa18.83■□□□□ 0.6
COL13A1-204ENST00000398975 ERVV-1B6SEH8 477 aa18.82■□□□□ 0.6
COL13A1-204ENST00000398975 RGL2O15211 777 aa18.82■□□□□ 0.6
COL13A1-204ENST00000398975 ELL2O00472 640 aaPredicted RBP18.81■□□□□ 0.6
COL13A1-204ENST00000398975 HOXB7P09629 217 aa18.81■□□□□ 0.6
COL13A1-204ENST00000398975 HDGFL1Q5TGJ6 251 aa18.81■□□□□ 0.6
COL13A1-204ENST00000398975 TSPYL6Q8N831 410 aa18.81■□□□□ 0.6
COL13A1-204ENST00000398975 DDX21Q9NR30 783 aaKnown RBP eCLIP18.81■□□□□ 0.6
COL13A1-204ENST00000398975 NIP7Q9Y221 180 aaKnown RBP eCLIP18.81■□□□□ 0.6
COL13A1-204ENST00000398975 ARFGEF1Q9Y6D6 1849 aa18.8■□□□□ 0.6
COL13A1-204ENST00000398975 YY1P25490 414 aa18.8■□□□□ 0.6
COL13A1-204ENST00000398975 ZNF652Q9Y2D9 606 aa18.8■□□□□ 0.6
COL13A1-204ENST00000398975 ATP10DQ9P241 1426 aa18.8■□□□□ 0.6
COL13A1-204ENST00000398975 UBN2Q6ZU65 1347 aa18.79■□□□□ 0.6
COL13A1-204ENST00000398975 GRIN3BO60391 1043 aa18.79■□□□□ 0.6
COL13A1-204ENST00000398975 KIF6Q6ZMV9 814 aa18.79■□□□□ 0.6
COL13A1-204ENST00000398975 COPS6Q7L5N1 327 aa18.79■□□□□ 0.6
COL13A1-204ENST00000398975 XAGE3Q8WTP9 111 aa18.79■□□□□ 0.6
COL13A1-204ENST00000398975 SPINK5Q9NQ38 1064 aaPredicted RBP18.79■□□□□ 0.6
COL13A1-204ENST00000398975 BCS1LQ9Y276 419 aa18.79■□□□□ 0.6
COL13A1-204ENST00000398975 IL16Q14005 1332 aa18.78■□□□□ 0.6
COL13A1-204ENST00000398975 CNBD1Q8NA66 436 aa18.78■□□□□ 0.6
COL13A1-204ENST00000398975 TNRC6CQ9HCJ0 1690 aaKnown RBP18.78■□□□□ 0.6
COL13A1-204ENST00000398975 FAM177BA6PVY3 158 aa18.77■□□□□ 0.6
COL13A1-204ENST00000398975 GPTP24298 496 aa18.77■□□□□ 0.6
COL13A1-204ENST00000398975 AIMP1Q12904 312 aaKnown RBP18.77■□□□□ 0.6
COL13A1-204ENST00000398975 GIGYF2Q6Y7W6 1299 aaKnown RBP18.77■□□□□ 0.6
COL13A1-204ENST00000398975 NBPF5PQ86XG9 351 aaPredicted RBP18.77■□□□□ 0.6
COL13A1-204ENST00000398975 C2CD5Q86YS7 1000 aa18.77■□□□□ 0.6
COL13A1-204ENST00000398975 ZNF34Q8IZ26 560 aa18.77■□□□□ 0.6
COL13A1-204ENST00000398975 BRIP1Q9BX63 1249 aa18.77■□□□□ 0.6
COL13A1-204ENST00000398975 PIM2Q9P1W9 311 aa18.77■□□□□ 0.6
COL13A1-204ENST00000398975 ANKRD36CQ5JPF3 1778 aa18.77■□□□□ 0.6
COL13A1-204ENST00000398975 ZNF521Q96K83 1311 aa18.75■□□□□ 0.59
COL13A1-204ENST00000398975 FANCIQ9NVI1 1328 aa18.75■□□□□ 0.59
COL13A1-204ENST00000398975 CCER2I3L3R5 266 aa18.75■□□□□ 0.59
COL13A1-204ENST00000398975 WDR63Q8IWG1 891 aa18.75■□□□□ 0.59
COL13A1-204ENST00000398975 DBF4Q9UBU7 674 aaPredicted RBP18.75■□□□□ 0.59
COL13A1-204ENST00000398975 ABCC12Q96J65 1359 aa18.75■□□□□ 0.59
COL13A1-204ENST00000398975 DALRD3Q5D0E6 543 aaKnown RBP18.74■□□□□ 0.59
COL13A1-204ENST00000398975 SUSD4Q5VX71 490 aa18.74■□□□□ 0.59
COL13A1-204ENST00000398975 ARFGEF2Q9Y6D5 1785 aa18.73■□□□□ 0.59
COL13A1-204ENST00000398975 DIEXFQ68CQ4 756 aaKnown RBP18.73■□□□□ 0.59
COL13A1-204ENST00000398975 NUTM1Q86Y26 1132 aa18.73■□□□□ 0.59
COL13A1-204ENST00000398975 MIER1Q8N108 512 aa18.73■□□□□ 0.59
COL13A1-204ENST00000398975 PHAXQ9H814 394 aaKnown RBP18.73■□□□□ 0.59
COL13A1-204ENST00000398975 CACNA1SQ13698 1873 aa18.72■□□□□ 0.59
COL13A1-204ENST00000398975 H0YIN7 160 aa18.72■□□□□ 0.59
COL13A1-204ENST00000398975 TCERG1O14776 1098 aaKnown RBP18.72■□□□□ 0.59
COL13A1-204ENST00000398975 NTSR2O95665 410 aa18.72■□□□□ 0.59
COL13A1-204ENST00000398975 PDE6BP35913 854 aa18.72■□□□□ 0.59
COL13A1-204ENST00000398975 ST5P78524 1137 aa18.72■□□□□ 0.59
COL13A1-204ENST00000398975 ERFEQ4G0M1 354 aa18.72■□□□□ 0.59
COL13A1-204ENST00000398975 TPTE2Q6XPS3 522 aa18.72■□□□□ 0.59
COL13A1-204ENST00000398975 SLX4Q8IY92 1834 aa18.72■□□□□ 0.59
COL13A1-204ENST00000398975 IBTKQ9P2D0 1353 aaPredicted RBP18.71■□□□□ 0.59
COL13A1-204ENST00000398975 KLRG2A4D1S0 409 aaPredicted RBP18.71■□□□□ 0.59
COL13A1-204ENST00000398975 SRGNP10124 158 aa18.71■□□□□ 0.59
COL13A1-204ENST00000398975 HYPKQ9NX55 129 aa18.71■□□□□ 0.59
COL13A1-204ENST00000398975 NPHP1O15259 732 aa18.7■□□□□ 0.58
COL13A1-204ENST00000398975 TWISTNBQ3B726 338 aaPredicted RBP18.7■□□□□ 0.58
COL13A1-204ENST00000398975 ARHGAP27Q6ZUM4 889 aa18.7■□□□□ 0.58
COL13A1-204ENST00000398975 PLBD2Q8NHP8 589 aa18.7■□□□□ 0.58
COL13A1-204ENST00000398975 ZNF428Q96B54 188 aa18.7■□□□□ 0.58
COL13A1-204ENST00000398975 EXOSC9Q06265 439 aaKnown RBP18.69■□□□□ 0.58
COL13A1-204ENST00000398975 TCIRG1Q13488 830 aa18.69■□□□□ 0.58
COL13A1-204ENST00000398975 ANKRD13DQ6ZTN6 518 aa18.69■□□□□ 0.58
COL13A1-204ENST00000398975 C3orf67Q6ZVT6 689 aa18.69■□□□□ 0.58
COL13A1-204ENST00000398975 NLRP10Q86W26 655 aa18.69■□□□□ 0.58
COL13A1-204ENST00000398975 SYNE4Q8N205 404 aa18.69■□□□□ 0.58
COL13A1-204ENST00000398975 TTLL6Q8N841 843 aa18.69■□□□□ 0.58
COL13A1-204ENST00000398975 ZNF784Q8NCA9 323 aaPredicted RBP18.69■□□□□ 0.58
COL13A1-204ENST00000398975 ZNF622Q969S3 477 aaKnown RBP eCLIP18.69■□□□□ 0.58
COL13A1-204ENST00000398975 ADCY9O60503 1353 aa18.68■□□□□ 0.58
COL13A1-204ENST00000398975 CCDC30Q5VVM6 783 aa18.68■□□□□ 0.58
COL13A1-204ENST00000398975 G2E3Q7L622 706 aa18.68■□□□□ 0.58
COL13A1-204ENST00000398975 NYXQ9GZU5 481 aa18.68■□□□□ 0.58
COL13A1-204ENST00000398975 RIC1Q4ADV7 1423 aa18.67■□□□□ 0.58
COL13A1-204ENST00000398975 SBF1O95248 1867 aa18.67■□□□□ 0.58
COL13A1-204ENST00000398975 VAMP4O75379 141 aa18.67■□□□□ 0.58
COL13A1-204ENST00000398975 PRELPP51888 382 aa18.67■□□□□ 0.58
COL13A1-204ENST00000398975 STYK1Q6J9G0 422 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms