RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 TSPY2A6NKD2 308 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 VGLL3A8MV65 326 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 ZYXQ15942 572 aaKnown RBP10.84□□□□□ -0.67
ATL3-201ENST00000398868 CFAP100Q494V2 611 aa10.83□□□□□ -0.68
ATL3-201ENST00000398868 TCERG1LQ5VWI1 586 aa10.83□□□□□ -0.68
ATL3-201ENST00000398868 CHST3Q7LGC8 479 aa10.83□□□□□ -0.68
ATL3-201ENST00000398868 CUL5Q93034 780 aa10.83□□□□□ -0.68
ATL3-201ENST00000398868 MICU3Q86XE3 530 aa10.83□□□□□ -0.68
ATL3-201ENST00000398868 BICD1Q96G01 975 aa10.83□□□□□ -0.68
ATL3-201ENST00000398868 CC2D2AQ9P2K1 1620 aa10.83□□□□□ -0.68
ATL3-201ENST00000398868 TCEANC2Q96MN5 208 aa10.83□□□□□ -0.68
ATL3-201ENST00000398868 ZNF213O14771 459 aa10.83□□□□□ -0.68
ATL3-201ENST00000398868 PNISRQ8TF01 805 aaKnown RBP10.83□□□□□ -0.68
ATL3-201ENST00000398868 NUP62CLQ9H1M0 184 aa10.83□□□□□ -0.68
ATL3-201ENST00000398868 LRRC9Q6ZRR7 1453 aa10.83□□□□□ -0.68
ATL3-201ENST00000398868 EPB41L2O43491 1005 aaKnown RBP10.83□□□□□ -0.68
ATL3-201ENST00000398868 SLC12A7Q9Y666 1083 aa10.82□□□□□ -0.68
ATL3-201ENST00000398868 DTNBO60941 627 aa10.82□□□□□ -0.68
ATL3-201ENST00000398868 SETDB2Q96T68 719 aa10.82□□□□□ -0.68
ATL3-201ENST00000398868 SORBS3O60504 671 aa10.82□□□□□ -0.68
ATL3-201ENST00000398868 NFE2L2Q16236 605 aa10.82□□□□□ -0.68
ATL3-201ENST00000398868 PROCA1Q8NCQ7 364 aaPredicted RBP10.82□□□□□ -0.68
ATL3-201ENST00000398868 TFIP11Q9UBB9 837 aaKnown RBP10.82□□□□□ -0.68
ATL3-201ENST00000398868 POGZQ7Z3K3 1410 aa10.82□□□□□ -0.68
ATL3-201ENST00000398868 MVPQ14764 893 aaKnown RBP10.82□□□□□ -0.68
ATL3-201ENST00000398868 KCNH5Q8NCM2 988 aa10.82□□□□□ -0.68
ATL3-201ENST00000398868 EZRP15311 586 aaKnown RBP10.82□□□□□ -0.68
ATL3-201ENST00000398868 MAP3K12Q12852 859 aa10.82□□□□□ -0.68
ATL3-201ENST00000398868 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
ATL3-201ENST00000398868 SAP30BPQ9UHR5 308 aaKnown RBP10.82□□□□□ -0.68
ATL3-201ENST00000398868 RABEP1Q15276 862 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 ARHGAP29Q52LW3 1261 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 USP25Q9UHP3 1055 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 TMCO5BA8MYB1 307 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 EAPPQ56P03 285 aaPredicted RBP10.81□□□□□ -0.68
ATL3-201ENST00000398868 CCDC178Q5BJE1 867 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 ANKRD18AQ8IVF6 992 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 NIP7Q9Y221 180 aaKnown RBP eCLIP10.81□□□□□ -0.68
ATL3-201ENST00000398868 IRX3P78415 501 aaPredicted RBP10.81□□□□□ -0.68
ATL3-201ENST00000398868 GOLGA8BA8MQT2 603 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 MYO1BO43795 1136 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 IDEP14735 1019 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 EIF6P56537 245 aaKnown RBP10.81□□□□□ -0.68
ATL3-201ENST00000398868 SYCP3Q8IZU3 236 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 MIGA1Q8NAN2 632 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 ADGRF5Q8IZF2 1346 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 CCDC148Q8NFR7 591 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 GRIN2BQ13224 1484 aa10.81□□□□□ -0.68
ATL3-201ENST00000398868 CD109Q6YHK3 1445 aa10.8□□□□□ -0.68
ATL3-201ENST00000398868 KRT85P78386 507 aa10.8□□□□□ -0.68
ATL3-201ENST00000398868 LARP1Q6PKG0 1096 aaKnown RBP10.8□□□□□ -0.68
ATL3-201ENST00000398868 RNF216Q9NWF9 866 aaPredicted RBP10.8□□□□□ -0.68
ATL3-201ENST00000398868 PRPF4BQ13523 1007 aaKnown RBP10.8□□□□□ -0.68
ATL3-201ENST00000398868 GCC1Q96CN9 775 aa10.8□□□□□ -0.68
ATL3-201ENST00000398868 GJC1P36383 396 aa10.8□□□□□ -0.68
ATL3-201ENST00000398868 IFFO1Q0D2I5 559 aa10.8□□□□□ -0.68
ATL3-201ENST00000398868 IDI1Q13907 227 aa10.8□□□□□ -0.68
ATL3-201ENST00000398868 DNAAF4Q8WXU2 420 aa10.8□□□□□ -0.68
ATL3-201ENST00000398868 TIGD1Q96MW7 591 aa10.8□□□□□ -0.68
ATL3-201ENST00000398868 KIF4BQ2VIQ3 1234 aa10.8□□□□□ -0.68
ATL3-201ENST00000398868 JAKMIP3Q5VZ66 844 aa10.8□□□□□ -0.68
ATL3-201ENST00000398868 NSFL1CQ9UNZ2 370 aaKnown RBP10.8□□□□□ -0.68
ATL3-201ENST00000398868 PLIN2Q99541 437 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 CUX1P39880 1505 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 KIF21BO75037 1637 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 PI4KAP2A4QPH2 592 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 PI4KAP1Q8N8J0 262 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 CTCFLQ8NI51 663 aaPredicted RBP10.79□□□□□ -0.68
ATL3-201ENST00000398868 GINS2Q9Y248 185 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 AKAP2Q9Y2D5 859 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 WDR33Q9C0J8 1336 aaKnown RBP10.79□□□□□ -0.68
ATL3-201ENST00000398868 GOLGA8AA7E2F4 631 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 RXRAP19793 462 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 JMYQ8N9B5 988 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 CHPF2Q9P2E5 772 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 CCDC160A6NGH7 325 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 CLGNO14967 610 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.79□□□□□ -0.68
ATL3-201ENST00000398868 V9GYY5 206 aaPredicted RBP10.79□□□□□ -0.68
ATL3-201ENST00000398868 CBFA2T2O43439 604 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 CACNA2D4Q7Z3S7 1137 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 SLC26A6Q9BXS9 759 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 SLC52A1Q9NWF4 448 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 CLIP2Q9UDT6 1046 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 CALM1P0DP23 149 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 CALM2P0DP24 149 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 CALM3P0DP25 149 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 PDCP20941 246 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 FERMT2Q96AC1 680 aa10.79□□□□□ -0.68
ATL3-201ENST00000398868 TMEM67Q5HYA8 995 aa10.78□□□□□ -0.68
ATL3-201ENST00000398868 CTR9Q6PD62 1173 aa10.78□□□□□ -0.68
ATL3-201ENST00000398868 IQCA1Q86XH1 822 aa10.78□□□□□ -0.68
ATL3-201ENST00000398868 KIF18AQ8NI77 898 aa10.78□□□□□ -0.68
ATL3-201ENST00000398868 SSRP1Q08945 709 aaKnown RBP10.78□□□□□ -0.68
ATL3-201ENST00000398868 SIRT1Q96EB6 747 aa10.78□□□□□ -0.68
ATL3-201ENST00000398868 CABP5Q9NP86 173 aa10.78□□□□□ -0.68
ATL3-201ENST00000398868 ARL1P40616 181 aaPredicted RBP10.78□□□□□ -0.68
ATL3-201ENST00000398868 HEATR3Q7Z4Q2 680 aa10.78□□□□□ -0.68
ATL3-201ENST00000398868 SSH1Q8WYL5 1049 aa10.78□□□□□ -0.68
ATL3-201ENST00000398868 RSPH14Q9UHP6 348 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms