RNA–Protein interactions for RNA: ENST00000398610.2

PCDHGA10-201, Transcript of protocadherin gamma subfamily A, 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA10, Length 4,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA10-201ENST00000398610 PDILTQ8N807 584 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 TMEM131LA2VDJ0 1609 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 NACAP1Q9BZK3 213 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 SHPRHQ149N8 1683 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 MYO5BQ9ULV0 1848 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 VAMP4O75379 141 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 ZBTB40Q9NUA8 1239 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 EPS15P42566 896 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 TAF3Q5VWG9 929 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 ANKRD24Q8TF21 1146 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 ZNF526Q8TF50 670 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 BRMS1Q9HCU9 246 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 CADPS2Q86UW7 1296 aa12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 HOOK1Q9UJC3 728 aaKnown RBP12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 ARHGEF40Q8TER5 1519 aa12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 LARP1Q6PKG0 1096 aaKnown RBP12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 TBC1D32Q96NH3 1257 aa12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 ANKIB1Q9P2G1 1089 aa12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 TTC21BQ7Z4L5 1316 aa12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 FLIIQ13045 1269 aa12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 ARGLU1Q9NWB6 273 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 IQSEC3Q9UPP2 1182 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 SSBP05455 408 aaKnown RBP eCLIP12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 EIF4A2Q14240 407 aaKnown RBP12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 TRMT1LQ7Z2T5 733 aaKnown RBP12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
PCDHGA10-201ENST00000398610 USP5P45974 858 aa12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 CCDC173Q0VFZ6 552 aa12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 KRT24Q2M2I5 525 aa12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 LARP1BQ659C4 914 aaKnown RBP12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 RPAP2Q8IXW5 612 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 CLTCQ00610 1675 aaKnown RBP12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 KINO60870 393 aaKnown RBP12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 ME1P48163 572 aa12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 HMGN5P82970 282 aaKnown RBP12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 C8orf37Q96NL8 207 aa12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 SLC3A2P08195 630 aaKnown RBP12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 RABEP1Q15276 862 aa12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 USP32Q8NFA0 1604 aa12.48□□□□□ -0.41
PCDHGA10-201ENST00000398610 ATP7BP35670 1465 aa12.47□□□□□ -0.41
PCDHGA10-201ENST00000398610 C6orf229H3BNL8 230 aa12.47□□□□□ -0.41
PCDHGA10-201ENST00000398610 AIDAQ96BJ3 306 aa12.47□□□□□ -0.41
PCDHGA10-201ENST00000398610 TBC1D2Q9BYX2 928 aa12.47□□□□□ -0.41
PCDHGA10-201ENST00000398610 CHMP4BP1P59074 171 aa12.47□□□□□ -0.41
PCDHGA10-201ENST00000398610 IFIT5Q13325 482 aaKnown RBP12.47□□□□□ -0.41
PCDHGA10-201ENST00000398610 UBAC1Q9BSL1 405 aa12.47□□□□□ -0.41
PCDHGA10-201ENST00000398610 CD163L1Q9NR16 1453 aa12.47□□□□□ -0.41
PCDHGA10-201ENST00000398610 MNS1Q8NEH6 495 aa12.47□□□□□ -0.41
PCDHGA10-201ENST00000398610 RUFY1Q96T51 708 aa12.47□□□□□ -0.41
PCDHGA10-201ENST00000398610 TRIM5Q9C035 493 aa12.47□□□□□ -0.41
PCDHGA10-201ENST00000398610 SKIDA1Q1XH10 827 aa12.46□□□□□ -0.41
PCDHGA10-201ENST00000398610 SMC5Q8IY18 1101 aa12.46□□□□□ -0.41
PCDHGA10-201ENST00000398610 HIP1O00291 1037 aa12.46□□□□□ -0.41
PCDHGA10-201ENST00000398610 IFIT1P09914 478 aaKnown RBP12.46□□□□□ -0.41
PCDHGA10-201ENST00000398610 GUCY1B3Q02153 619 aa12.46□□□□□ -0.41
PCDHGA10-201ENST00000398610 AMOTQ4VCS5 1084 aa12.46□□□□□ -0.41
PCDHGA10-201ENST00000398610 PRPF40BQ6NWY9 871 aaKnown RBP12.46□□□□□ -0.41
PCDHGA10-201ENST00000398610 DBF4Q9UBU7 674 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA10-201ENST00000398610 PDCP20941 246 aa12.46□□□□□ -0.42
PCDHGA10-201ENST00000398610 LTKP29376 864 aa12.46□□□□□ -0.42
PCDHGA10-201ENST00000398610 WWC2Q6AWC2 1192 aa12.46□□□□□ -0.42
PCDHGA10-201ENST00000398610 LDHAL6AQ6ZMR3 332 aa12.46□□□□□ -0.42
PCDHGA10-201ENST00000398610 KIF1BPQ96EK5 621 aa12.46□□□□□ -0.42
PCDHGA10-201ENST00000398610 PRR36Q9H6K5 1346 aa12.46□□□□□ -0.42
PCDHGA10-201ENST00000398610 KCNA6P17658 529 aa12.46□□□□□ -0.42
PCDHGA10-201ENST00000398610 RAB11FIP4Q86YS3 637 aa12.46□□□□□ -0.42
PCDHGA10-201ENST00000398610 BCCIPQ9P287 314 aaKnown RBP eCLIP12.46□□□□□ -0.42
PCDHGA10-201ENST00000398610 PNPLA6Q8IY17 1366 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 TMEM2Q9UHN6 1383 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 CCDC69A6NI79 296 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 KRT18P05783 430 aaKnown RBP12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 TRIM22Q8IYM9 498 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 MAP3K2Q9Y2U5 619 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 MPHOSPH10O00566 681 aaKnown RBP12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 MX1P20591 662 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 NUCB1Q02818 461 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 SPC24Q8NBT2 197 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 CASTP20810 708 aaKnown RBP12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 IFNL2Q8IZJ0 200 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 CDK5RAP3Q96JB5 506 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 FAM135BQ49AJ0 1406 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 MED14O60244 1454 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 LRRC7Q96NW7 1537 aa12.45□□□□□ -0.42
PCDHGA10-201ENST00000398610 ROBO2Q9HCK4 1378 aa12.44□□□□□ -0.42
PCDHGA10-201ENST00000398610 USP19O94966 1318 aa12.44□□□□□ -0.42
PCDHGA10-201ENST00000398610 PLCD3Q8N3E9 789 aa12.44□□□□□ -0.42
PCDHGA10-201ENST00000398610 MCM2P49736 904 aa12.44□□□□□ -0.42
PCDHGA10-201ENST00000398610 PDCL3Q9H2J4 239 aa12.44□□□□□ -0.42
PCDHGA10-201ENST00000398610 PDRG1Q9NUG6 133 aa12.44□□□□□ -0.42
PCDHGA10-201ENST00000398610 LETM1O95202 739 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA10-201ENST00000398610 SMC2O95347 1197 aa12.43□□□□□ -0.42
PCDHGA10-201ENST00000398610 HAND2P61296 217 aa12.43□□□□□ -0.42
PCDHGA10-201ENST00000398610 DIP2BQ9P265 1576 aa12.43□□□□□ -0.42
PCDHGA10-201ENST00000398610 COL3A1P02461 1466 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms