RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 MAP3K2Q9Y2U5 619 aa13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 CCT2P78371 535 aaKnown RBP13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 KRT32Q14532 448 aa13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 ZNHIT6Q9NWK9 470 aaKnown RBP13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 AKAP2Q9Y2D5 859 aa13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 EFCAB6Q5THR3 1501 aa13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 KLHL10Q6JEL2 608 aa13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 ANKRD24Q8TF21 1146 aa13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 ARGLU1Q9NWB6 273 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 ERVK-7P63135 1459 aa13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 GOLIM4O00461 696 aa13.53□□□□□ -0.24
PCDHGA8-201ENST00000398604 PPFIBP1Q86W92 1011 aa13.53□□□□□ -0.24
PCDHGA8-201ENST00000398604 BMP2KQ9NSY1 1161 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA8-201ENST00000398604 SEPT11Q9NVA2 429 aaKnown RBP13.53□□□□□ -0.24
PCDHGA8-201ENST00000398604 ABCC11Q96J66 1382 aa13.53□□□□□ -0.24
PCDHGA8-201ENST00000398604 SMARCE1Q969G3 411 aa13.53□□□□□ -0.24
PCDHGA8-201ENST00000398604 CDKL5O76039 1030 aa13.53□□□□□ -0.24
PCDHGA8-201ENST00000398604 STIM1Q13586 685 aa13.53□□□□□ -0.24
PCDHGA8-201ENST00000398604 ABCC3O15438 1527 aa13.53□□□□□ -0.24
PCDHGA8-201ENST00000398604 CCDC144CPQ8IYA2 1237 aa13.52□□□□□ -0.24
PCDHGA8-201ENST00000398604 IFNL2Q8IZJ0 200 aa13.52□□□□□ -0.24
PCDHGA8-201ENST00000398604 GDPD2Q9HCC8 539 aa13.52□□□□□ -0.24
PCDHGA8-201ENST00000398604 MAP3K12Q12852 859 aa13.52□□□□□ -0.24
PCDHGA8-201ENST00000398604 PANK2Q9BZ23 570 aa13.52□□□□□ -0.24
PCDHGA8-201ENST00000398604 UNC13BO14795 1591 aa13.52□□□□□ -0.24
PCDHGA8-201ENST00000398604 TTC21BQ7Z4L5 1316 aa13.52□□□□□ -0.24
PCDHGA8-201ENST00000398604 TRPM1Q7Z4N2 1603 aa13.52□□□□□ -0.24
PCDHGA8-201ENST00000398604 TET3O43151 1660 aa13.52□□□□□ -0.25
PCDHGA8-201ENST00000398604 TBC1D2Q9BYX2 928 aa13.52□□□□□ -0.25
PCDHGA8-201ENST00000398604 VAT1LQ9HCJ6 419 aa13.52□□□□□ -0.25
PCDHGA8-201ENST00000398604 TFIP11Q9UBB9 837 aaKnown RBP13.52□□□□□ -0.25
PCDHGA8-201ENST00000398604 CFAP45Q9UL16 551 aa13.52□□□□□ -0.25
PCDHGA8-201ENST00000398604 POLR1AO95602 1720 aaPredicted RBP13.52□□□□□ -0.25
PCDHGA8-201ENST00000398604 IQGAP3Q86VI3 1631 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 ANKRD18BA2A2Z9 1011 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 PPP1R42Q7Z4L9 355 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 RPGRQ92834 1020 aaKnown RBP13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 MBIPQ9NS73 344 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 PLEKHH1Q9ULM0 1364 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 UBAP1LF5GYI3 381 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 ZSCAN31Q96LW9 406 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 PLEKHG1Q9ULL1 1385 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 TTLL12Q14166 644 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 C8orf34Q49A92 452 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 TEX35Q5T0J7 233 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 ZNF444Q8N0Y2 327 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 ZNF622Q969S3 477 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 TCEANC2Q96MN5 208 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 NUP62CLQ9H1M0 184 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 RBM10P98175 930 aaKnown RBP13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 CCDC96Q2M329 555 aa13.51□□□□□ -0.25
PCDHGA8-201ENST00000398604 SYCE3A1L190 88 aa13.5□□□□□ -0.25
PCDHGA8-201ENST00000398604 ZNF213O14771 459 aa13.5□□□□□ -0.25
PCDHGA8-201ENST00000398604 MATR3P43243 847 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCDHGA8-201ENST00000398604 HYPKQ9NX55 129 aa13.5□□□□□ -0.25
PCDHGA8-201ENST00000398604 IFIT3O14879 490 aaKnown RBP13.5□□□□□ -0.25
PCDHGA8-201ENST00000398604 ENOX2Q16206 610 aaKnown RBP13.5□□□□□ -0.25
PCDHGA8-201ENST00000398604 PPIP5K1Q6PFW1 1433 aa13.5□□□□□ -0.25
PCDHGA8-201ENST00000398604 CTCFLQ8NI51 663 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA8-201ENST00000398604 AK7Q96M32 723 aa13.49□□□□□ -0.25
PCDHGA8-201ENST00000398604 PCDHB15Q9Y5E8 787 aa13.49□□□□□ -0.25
PCDHGA8-201ENST00000398604 LRRC59Q96AG4 307 aaKnown RBP13.49□□□□□ -0.25
PCDHGA8-201ENST00000398604 TNNQ9UQP3 1299 aa13.49□□□□□ -0.25
PCDHGA8-201ENST00000398604 CFAP100Q494V2 611 aa13.49□□□□□ -0.25
PCDHGA8-201ENST00000398604 ANKRD13DQ6ZTN6 518 aa13.49□□□□□ -0.25
PCDHGA8-201ENST00000398604 DDX46Q7L014 1031 aaKnown RBP13.49□□□□□ -0.25
PCDHGA8-201ENST00000398604 COPS6Q7L5N1 327 aa13.49□□□□□ -0.25
PCDHGA8-201ENST00000398604 MYOM2P54296 1465 aa13.49□□□□□ -0.25
PCDHGA8-201ENST00000398604 ALDH1L2Q3SY69 923 aa13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 IQCA1Q86XH1 822 aa13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 CEP57L1Q8IYX8 460 aa13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 UBA5Q9GZZ9 404 aa13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 C8orf76Q96K31 380 aa13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 PRDM15P57071 1507 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 NEFHP12036 1026 aa13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 SLC5A1P13866 664 aa13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 AXDND1Q5T1B0 1012 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 MEIS3Q99687 375 aa13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 CARD14Q9BXL6 1004 aa13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 UGGT1Q9NYU2 1555 aa13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 EIF5P55010 431 aaKnown RBP13.48□□□□□ -0.25
PCDHGA8-201ENST00000398604 C8orf37Q96NL8 207 aa13.47□□□□□ -0.25
PCDHGA8-201ENST00000398604 PIK3R4Q99570 1358 aa13.47□□□□□ -0.25
PCDHGA8-201ENST00000398604 RFC4P35249 363 aa13.47□□□□□ -0.25
PCDHGA8-201ENST00000398604 CDR1P51861 262 aa13.47□□□□□ -0.25
PCDHGA8-201ENST00000398604 MICU3Q86XE3 530 aa13.47□□□□□ -0.25
PCDHGA8-201ENST00000398604 GRPEL1Q9HAV7 217 aa13.47□□□□□ -0.25
PCDHGA8-201ENST00000398604 SEC63Q9UGP8 760 aaKnown RBP13.47□□□□□ -0.25
PCDHGA8-201ENST00000398604 AGLP35573 1532 aa13.47□□□□□ -0.25
PCDHGA8-201ENST00000398604 KRT24Q2M2I5 525 aa13.47□□□□□ -0.25
PCDHGA8-201ENST00000398604 CKAP2LQ8IYA6 745 aa13.47□□□□□ -0.25
PCDHGA8-201ENST00000398604 XAGE3Q8WTP9 111 aa13.47□□□□□ -0.25
PCDHGA8-201ENST00000398604 F8W031 263 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA8-201ENST00000398604 HSP90AB3PQ58FF7 597 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms