RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 KIAA0232Q92628 1395 aa13.11□□□□□ -0.31
MSL3-207ENST00000398527 FYB1O15117 783 aa13.11□□□□□ -0.31
MSL3-207ENST00000398527 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
MSL3-207ENST00000398527 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
MSL3-207ENST00000398527 PPIP5K1Q6PFW1 1433 aa13.1□□□□□ -0.31
MSL3-207ENST00000398527 SSH2Q76I76 1423 aa13.1□□□□□ -0.31
MSL3-207ENST00000398527 PARP4Q9UKK3 1724 aaKnown RBP13.1□□□□□ -0.31
MSL3-207ENST00000398527 RIOK3O14730 519 aaKnown RBP13.1□□□□□ -0.31
MSL3-207ENST00000398527 IGHDP01880 384 aa13.1□□□□□ -0.31
MSL3-207ENST00000398527 CCDC181Q5TID7 509 aa13.1□□□□□ -0.31
MSL3-207ENST00000398527 CCDC82Q8N4S0 544 aa13.1□□□□□ -0.31
MSL3-207ENST00000398527 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
MSL3-207ENST00000398527 CHRNA2Q15822 529 aa13.09□□□□□ -0.31
MSL3-207ENST00000398527 CCDC94Q9BW85 323 aaPredicted RBP13.09□□□□□ -0.31
MSL3-207ENST00000398527 TRAIPQ9BWF2 469 aa13.09□□□□□ -0.31
MSL3-207ENST00000398527 CABP1Q9NZU7 370 aa13.09□□□□□ -0.31
MSL3-207ENST00000398527 PHRF1Q9P1Y6 1649 aaKnown RBP13.08□□□□□ -0.31
MSL3-207ENST00000398527 U2AF1L5P0DN76 240 aaPredicted RBP13.08□□□□□ -0.31
MSL3-207ENST00000398527 U2AF1Q01081 240 aaKnown RBP eCLIP13.08□□□□□ -0.31
MSL3-207ENST00000398527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.31
MSL3-207ENST00000398527 MTFR1LQ9H019 292 aa13.08□□□□□ -0.31
MSL3-207ENST00000398527 GGNBP2Q9H3C7 697 aa13.08□□□□□ -0.31
MSL3-207ENST00000398527 ERBB3P21860 1342 aa13.08□□□□□ -0.32
MSL3-207ENST00000398527 OVOS2A0A0G2JMS6 1433 aa13.08□□□□□ -0.32
MSL3-207ENST00000398527 OVOS2A0A0J9YW53 1432 aa13.08□□□□□ -0.32
MSL3-207ENST00000398527 OVOS2Q6IE36 1432 aa13.08□□□□□ -0.32
MSL3-207ENST00000398527 SBF2Q86WG5 1849 aa13.08□□□□□ -0.32
MSL3-207ENST00000398527 WASLO00401 505 aaPredicted RBP13.08□□□□□ -0.32
MSL3-207ENST00000398527 EPB41L2O43491 1005 aaKnown RBP13.08□□□□□ -0.32
MSL3-207ENST00000398527 CGNQ9P2M7 1197 aaKnown RBP13.08□□□□□ -0.32
MSL3-207ENST00000398527 CPSF1Q10570 1443 aaKnown RBP13.08□□□□□ -0.32
MSL3-207ENST00000398527 CCDC172P0C7W6 258 aa13.07□□□□□ -0.32
MSL3-207ENST00000398527 TMPOP42166 694 aaKnown RBP13.07□□□□□ -0.32
MSL3-207ENST00000398527 ZRSR2Q15696 482 aaKnown RBP13.07□□□□□ -0.32
MSL3-207ENST00000398527 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
MSL3-207ENST00000398527 CXorf38Q8TB03 319 aa13.07□□□□□ -0.32
MSL3-207ENST00000398527 RWDD1Q9H446 243 aaPredicted RBP13.07□□□□□ -0.32
MSL3-207ENST00000398527 PPFIA4O75335 1185 aa13.07□□□□□ -0.32
MSL3-207ENST00000398527 MVPQ14764 893 aaKnown RBP13.07□□□□□ -0.32
MSL3-207ENST00000398527 GPR162Q16538 588 aa13.07□□□□□ -0.32
MSL3-207ENST00000398527 PANK1Q8TE04 598 aa13.07□□□□□ -0.32
MSL3-207ENST00000398527 COG6Q9Y2V7 657 aa13.07□□□□□ -0.32
MSL3-207ENST00000398527 MON2Q7Z3U7 1717 aa13.06□□□□□ -0.32
MSL3-207ENST00000398527 MYCBPQ99417 103 aaPredicted RBP13.06□□□□□ -0.32
MSL3-207ENST00000398527 STK32BQ9NY57 414 aa13.06□□□□□ -0.32
MSL3-207ENST00000398527 AKAP12Q02952 1782 aa13.06□□□□□ -0.32
MSL3-207ENST00000398527 EDC4Q6P2E9 1401 aaKnown RBP13.06□□□□□ -0.32
MSL3-207ENST00000398527 FCHSD2O94868 740 aa13.06□□□□□ -0.32
MSL3-207ENST00000398527 EVA1CP58658 441 aa13.06□□□□□ -0.32
MSL3-207ENST00000398527 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
MSL3-207ENST00000398527 AATKQ6ZMQ8 1374 aa13.05□□□□□ -0.32
MSL3-207ENST00000398527 SKAP1Q86WV1 359 aa13.05□□□□□ -0.32
MSL3-207ENST00000398527 PROM2Q8N271 834 aa13.05□□□□□ -0.32
MSL3-207ENST00000398527 PNMA2Q9UL42 364 aa13.05□□□□□ -0.32
MSL3-207ENST00000398527 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
MSL3-207ENST00000398527 ITSN1Q15811 1721 aa13.05□□□□□ -0.32
MSL3-207ENST00000398527 MPHOSPH10O00566 681 aaKnown RBP13.05□□□□□ -0.32
MSL3-207ENST00000398527 DIAPH1O60610 1272 aaKnown RBP13.05□□□□□ -0.32
MSL3-207ENST00000398527 PEX14O75381 377 aa13.05□□□□□ -0.32
MSL3-207ENST00000398527 ALDH1L2Q3SY69 923 aa13.05□□□□□ -0.32
MSL3-207ENST00000398527 LONRF3Q496Y0 759 aa13.05□□□□□ -0.32
MSL3-207ENST00000398527 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
MSL3-207ENST00000398527 SPATA32Q96LK8 384 aa13.05□□□□□ -0.32
MSL3-207ENST00000398527 RRP7AQ9Y3A4 280 aaKnown RBP13.05□□□□□ -0.32
MSL3-207ENST00000398527 HSPA6P17066 643 aa13.04□□□□□ -0.32
MSL3-207ENST00000398527 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
MSL3-207ENST00000398527 C1QTNF12Q5T7M4 302 aa13.04□□□□□ -0.32
MSL3-207ENST00000398527 USP19O94966 1318 aa13.04□□□□□ -0.32
MSL3-207ENST00000398527 KIF4AO95239 1232 aa13.04□□□□□ -0.32
MSL3-207ENST00000398527 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
MSL3-207ENST00000398527 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
MSL3-207ENST00000398527 LMO7Q8WWI1 1683 aa13.03□□□□□ -0.32
MSL3-207ENST00000398527 RLBP1P12271 317 aa13.03□□□□□ -0.32
MSL3-207ENST00000398527 ADRA2BP18089 450 aa13.03□□□□□ -0.32
MSL3-207ENST00000398527 UVSSAQ2YD98 709 aa13.03□□□□□ -0.32
MSL3-207ENST00000398527 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
MSL3-207ENST00000398527 FRMD4BQ9Y2L6 1034 aa13.03□□□□□ -0.32
MSL3-207ENST00000398527 KIF16BQ96L93 1317 aa13.03□□□□□ -0.32
MSL3-207ENST00000398527 ZC3H6P61129 1189 aaKnown RBP13.02□□□□□ -0.32
MSL3-207ENST00000398527 NUDT16Q96DE0 195 aaKnown RBP13.02□□□□□ -0.32
MSL3-207ENST00000398527 KDM4CQ9H3R0 1056 aa13.02□□□□□ -0.32
MSL3-207ENST00000398527 DDX19BQ9UMR2 479 aa13.02□□□□□ -0.32
MSL3-207ENST00000398527 PCDHB15Q9Y5E8 787 aa13.02□□□□□ -0.32
MSL3-207ENST00000398527 SMC3Q9UQE7 1217 aa13.02□□□□□ -0.33
MSL3-207ENST00000398527 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
MSL3-207ENST00000398527 LRRC37A3O60309 1634 aa13.02□□□□□ -0.33
MSL3-207ENST00000398527 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.33
MSL3-207ENST00000398527 MAP2P11137 1827 aaKnown RBP13.01□□□□□ -0.33
MSL3-207ENST00000398527 CAPN2P17655 700 aa13.01□□□□□ -0.33
MSL3-207ENST00000398527 PTF1AQ7RTS3 328 aa13.01□□□□□ -0.33
MSL3-207ENST00000398527 KCNV2Q8TDN2 545 aa13.01□□□□□ -0.33
MSL3-207ENST00000398527 FAM210AQ96ND0 272 aa13.01□□□□□ -0.33
MSL3-207ENST00000398527 PAIP2Q9BPZ3 127 aaKnown RBP13.01□□□□□ -0.33
MSL3-207ENST00000398527 TDO2P48775 406 aa13.01□□□□□ -0.33
MSL3-207ENST00000398527 PRR36Q9H6K5 1346 aa13□□□□□ -0.33
MSL3-207ENST00000398527 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
MSL3-207ENST00000398527 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
MSL3-207ENST00000398527 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
MSL3-207ENST00000398527 BECN1Q14457 450 aa13□□□□□ -0.33
MSL3-207ENST00000398527 TXNRD1Q16881 649 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms