RNA–Protein interactions for RNA: ENST00000398460.3

MEG3-201, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 3,382 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-201ENST00000398460 GDPD2Q9HCC8 539 aa14.62□□□□□ -0.07
MEG3-201ENST00000398460 G3BP1Q13283 466 aaKnown RBP eCLIP14.62□□□□□ -0.07
MEG3-201ENST00000398460 AACSQ86V21 672 aa14.62□□□□□ -0.07
MEG3-201ENST00000398460 RAPGEF4Q8WZA2 1011 aa14.62□□□□□ -0.07
MEG3-201ENST00000398460 IL25Q9H293 177 aa14.62□□□□□ -0.07
MEG3-201ENST00000398460 SPDYE4A6NLX3 237 aa14.62□□□□□ -0.07
MEG3-201ENST00000398460 SGSM2O43147 1006 aa14.62□□□□□ -0.07
MEG3-201ENST00000398460 ZNF500O60304 480 aaPredicted RBP14.62□□□□□ -0.07
MEG3-201ENST00000398460 ZNF445P59923 1031 aa14.62□□□□□ -0.07
MEG3-201ENST00000398460 SYAP1Q96A49 352 aaPredicted RBP14.62□□□□□ -0.07
MEG3-201ENST00000398460 INTS4Q96HW7 963 aaKnown RBP14.62□□□□□ -0.07
MEG3-201ENST00000398460 HSPA4P34932 840 aa14.61□□□□□ -0.07
MEG3-201ENST00000398460 PROSER3Q2NL68 480 aa14.61□□□□□ -0.07
MEG3-201ENST00000398460 PI4K2BQ8TCG2 481 aa14.61□□□□□ -0.07
MEG3-201ENST00000398460 SIL1Q9H173 461 aa14.61□□□□□ -0.07
MEG3-201ENST00000398460 CEMIPQ8WUJ3 1361 aa14.61□□□□□ -0.07
MEG3-201ENST00000398460 FMN2Q9NZ56 1722 aa14.61□□□□□ -0.07
MEG3-201ENST00000398460 MYL6BP14649 208 aa14.61□□□□□ -0.07
MEG3-201ENST00000398460 KSR2Q6VAB6 950 aa14.61□□□□□ -0.07
MEG3-201ENST00000398460 WDR33Q9C0J8 1336 aaKnown RBP14.61□□□□□ -0.07
MEG3-201ENST00000398460 PRAMEF22A3QJZ6 481 aa14.6□□□□□ -0.07
MEG3-201ENST00000398460 BRD1O95696 1058 aa14.6□□□□□ -0.07
MEG3-201ENST00000398460 SASS6Q6UVJ0 657 aa14.6□□□□□ -0.07
MEG3-201ENST00000398460 PROSER2Q86WR7 435 aaPredicted RBP14.6□□□□□ -0.07
MEG3-201ENST00000398460 ERC1Q8IUD2 1116 aa14.6□□□□□ -0.07
MEG3-201ENST00000398460 ECHDC1Q9NTX5 307 aa14.6□□□□□ -0.07
MEG3-201ENST00000398460 DYNC1I1O14576 645 aa14.6□□□□□ -0.07
MEG3-201ENST00000398460 CASTP20810 708 aaKnown RBP14.6□□□□□ -0.07
MEG3-201ENST00000398460 NEXNQ0ZGT2 675 aa14.6□□□□□ -0.07
MEG3-201ENST00000398460 CUL4AQ13619 759 aa14.6□□□□□ -0.07
MEG3-201ENST00000398460 SMC3Q9UQE7 1217 aa14.6□□□□□ -0.07
MEG3-201ENST00000398460 GIGYF1O75420 1035 aaPredicted RBP14.6□□□□□ -0.07
MEG3-201ENST00000398460 RAD50Q92878 1312 aa14.6□□□□□ -0.07
MEG3-201ENST00000398460 HYPKQ9NX55 129 aa14.59□□□□□ -0.07
MEG3-201ENST00000398460 ALDH1L1O75891 902 aa14.59□□□□□ -0.07
MEG3-201ENST00000398460 SLC39A6Q13433 755 aa14.59□□□□□ -0.07
MEG3-201ENST00000398460 CSPP1Q1MSJ5 1256 aa14.59□□□□□ -0.07
MEG3-201ENST00000398460 KRT28Q7Z3Y7 464 aa14.59□□□□□ -0.07
MEG3-201ENST00000398460 ARHGEF25Q86VW2 580 aa14.59□□□□□ -0.07
MEG3-201ENST00000398460 DDX54Q8TDD1 881 aaKnown RBP14.59□□□□□ -0.07
MEG3-201ENST00000398460 PXDNLA1KZ92 1463 aa14.59□□□□□ -0.07
MEG3-201ENST00000398460 ZKSCAN1P17029 563 aaPredicted RBP14.59□□□□□ -0.07
MEG3-201ENST00000398460 PRPF40BQ6NWY9 871 aaKnown RBP14.59□□□□□ -0.07
MEG3-201ENST00000398460 CCDC8Q9H0W5 538 aaPredicted RBP14.59□□□□□ -0.07
MEG3-201ENST00000398460 SNX14Q9Y5W7 946 aa14.59□□□□□ -0.07
MEG3-201ENST00000398460 CPA1P15085 419 aa14.58□□□□□ -0.08
MEG3-201ENST00000398460 SMAP1Q8IYB5 467 aaPredicted RBP14.58□□□□□ -0.08
MEG3-201ENST00000398460 JAKMIP1Q96N16 626 aaKnown RBP14.58□□□□□ -0.08
MEG3-201ENST00000398460 CCDC39Q9UFE4 941 aa14.58□□□□□ -0.08
MEG3-201ENST00000398460 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.58□□□□□ -0.08
MEG3-201ENST00000398460 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.58□□□□□ -0.08
MEG3-201ENST00000398460 TTC41PQ6P2S7 1318 aa14.58□□□□□ -0.08
MEG3-201ENST00000398460 GRM8O00222 908 aa14.57□□□□□ -0.08
MEG3-201ENST00000398460 AK2P54819 239 aa14.57□□□□□ -0.08
MEG3-201ENST00000398460 LIMCH1Q9UPQ0 1083 aa14.57□□□□□ -0.08
MEG3-201ENST00000398460 ADCY9O60503 1353 aa14.57□□□□□ -0.08
MEG3-201ENST00000398460 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
MEG3-201ENST00000398460 LINS1Q8NG48 757 aa14.57□□□□□ -0.08
MEG3-201ENST00000398460 PDLIM2Q96JY6 352 aa14.57□□□□□ -0.08
MEG3-201ENST00000398460 TTC12Q9H892 705 aaPredicted RBP14.57□□□□□ -0.08
MEG3-201ENST00000398460 TERF1P54274 439 aa14.57□□□□□ -0.08
MEG3-201ENST00000398460 LRSAM1Q6UWE0 723 aa14.57□□□□□ -0.08
MEG3-201ENST00000398460 FSD1Q9BTV5 496 aa14.56□□□□□ -0.08
MEG3-201ENST00000398460 NWD1Q149M9 1564 aa14.56□□□□□ -0.08
MEG3-201ENST00000398460 PHF14O94880 888 aa14.56□□□□□ -0.08
MEG3-201ENST00000398460 PPP4R3BQ5MIZ7 849 aa14.56□□□□□ -0.08
MEG3-201ENST00000398460 TTC5Q8N0Z6 440 aa14.56□□□□□ -0.08
MEG3-201ENST00000398460 LSG1Q9H089 658 aaKnown RBP14.56□□□□□ -0.08
MEG3-201ENST00000398460 EPB41L2O43491 1005 aaKnown RBP14.56□□□□□ -0.08
MEG3-201ENST00000398460 DTNBO60941 627 aa14.56□□□□□ -0.08
MEG3-201ENST00000398460 KIAA2012Q0VF49 1180 aa14.56□□□□□ -0.08
MEG3-201ENST00000398460 CCDC83Q8IWF9 413 aa14.56□□□□□ -0.08
MEG3-201ENST00000398460 CCDC94Q9BW85 323 aaPredicted RBP14.56□□□□□ -0.08
MEG3-201ENST00000398460 BOLA2Q9H3K6 86 aa14.56□□□□□ -0.08
MEG3-201ENST00000398460 BICC1Q9H694 974 aaKnown RBP14.56□□□□□ -0.08
MEG3-201ENST00000398460 PDRG1Q9NUG6 133 aa14.56□□□□□ -0.08
MEG3-201ENST00000398460 CYP46A1Q9Y6A2 500 aa14.56□□□□□ -0.08
MEG3-201ENST00000398460 FIBPO43427 364 aa14.55□□□□□ -0.08
MEG3-201ENST00000398460 SUCLG2Q96I99 432 aa14.55□□□□□ -0.08
MEG3-201ENST00000398460 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
MEG3-201ENST00000398460 FER1L4A9Z1Z3 1794 aa14.55□□□□□ -0.08
MEG3-201ENST00000398460 TATP17735 454 aaPredicted RBP14.55□□□□□ -0.08
MEG3-201ENST00000398460 HS1BP3Q53T59 392 aa14.55□□□□□ -0.08
MEG3-201ENST00000398460 EVI5LQ96CN4 794 aa14.55□□□□□ -0.08
MEG3-201ENST00000398460 DDX21Q9NR30 783 aaKnown RBP eCLIP14.55□□□□□ -0.08
MEG3-201ENST00000398460 VPS37CA5D8V6 355 aaPredicted RBP14.54□□□□□ -0.08
MEG3-201ENST00000398460 TSPY26PQ9H489 355 aa14.54□□□□□ -0.08
MEG3-201ENST00000398460 ATP6V1DQ9Y5K8 247 aa14.54□□□□□ -0.08
MEG3-201ENST00000398460 LARP1Q6PKG0 1096 aaKnown RBP14.54□□□□□ -0.08
MEG3-201ENST00000398460 USP48Q86UV5 1035 aa14.54□□□□□ -0.08
MEG3-201ENST00000398460 USP25Q9UHP3 1055 aa14.54□□□□□ -0.08
MEG3-201ENST00000398460 ADGRL3Q9HAR2 1447 aa14.54□□□□□ -0.08
MEG3-201ENST00000398460 PIP4K2AP48426 406 aaPredicted RBP14.54□□□□□ -0.08
MEG3-201ENST00000398460 MYD88Q99836 296 aa14.54□□□□□ -0.08
MEG3-201ENST00000398460 CCDC9Q9Y3X0 531 aaKnown RBP14.54□□□□□ -0.08
MEG3-201ENST00000398460 STX6O43752 255 aa14.53□□□□□ -0.08
MEG3-201ENST00000398460 ZSCAN20P17040 1043 aaPredicted RBP14.53□□□□□ -0.08
MEG3-201ENST00000398460 PTH1RQ03431 593 aa14.53□□□□□ -0.08
MEG3-201ENST00000398460 NFATC2IPQ8NCF5 419 aa14.53□□□□□ -0.08
MEG3-201ENST00000398460 KLHDC4Q8TBB5 520 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms