RNA–Protein interactions for RNA: ENST00000398455.3

HIGD1C-201, Transcript of HIG1 hypoxia inducible domain family member 1C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1C, Length 371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1C-201ENST00000398455 MKRN1Q9UHC7 482 aaKnown RBP6.68□□□□□ -1.34
HIGD1C-201ENST00000398455 SRPK2P78362 688 aaKnown RBP6.67□□□□□ -1.34
HIGD1C-201ENST00000398455 KANK4Q5T7N3 995 aaPredicted RBP6.67□□□□□ -1.34
HIGD1C-201ENST00000398455 PBXIP1Q96AQ6 731 aa6.67□□□□□ -1.34
HIGD1C-201ENST00000398455 ESF1Q9H501 851 aaKnown RBP6.67□□□□□ -1.34
HIGD1C-201ENST00000398455 NOD1Q9Y239 953 aa6.67□□□□□ -1.34
HIGD1C-201ENST00000398455 SPDYE3A6NKU9 549 aa6.66□□□□□ -1.34
HIGD1C-201ENST00000398455 MYCP01106 439 aaPredicted RBP6.66□□□□□ -1.34
HIGD1C-201ENST00000398455 CSB-PGBD3P0DP91 1061 aa6.66□□□□□ -1.34
HIGD1C-201ENST00000398455 ERVK-9P63128 1117 aa6.66□□□□□ -1.34
HIGD1C-201ENST00000398455 LCE4AQ5TA78 99 aa6.66□□□□□ -1.34
HIGD1C-201ENST00000398455 CC2D2BQ6DHV5 1058 aa6.66□□□□□ -1.34
HIGD1C-201ENST00000398455 PGBD3Q8N328 593 aa6.66□□□□□ -1.34
HIGD1C-201ENST00000398455 SIRT1Q96EB6 747 aa6.66□□□□□ -1.34
HIGD1C-201ENST00000398455 PCMTD2Q9NV79 361 aa6.66□□□□□ -1.34
HIGD1C-201ENST00000398455 PPP1R15AO75807 674 aaPredicted RBP6.65□□□□□ -1.34
HIGD1C-201ENST00000398455 RASA1P20936 1047 aa6.65□□□□□ -1.34
HIGD1C-201ENST00000398455 A0A1B0GTH6 734 aa6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 ADH6P28332 368 aa6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 GTF2IP78347 998 aa6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 JAG1P78504 1218 aa6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 CLN3Q13286 438 aa6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 EFHC2Q5JST6 749 aa6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 OGFOD1Q8N543 542 aa6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 TP53INP1Q96A56 240 aa6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 NACC1Q96RE7 527 aa6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 OSBPL3Q9H4L5 887 aa6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 RNF112Q9ULX5 631 aa6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 ACIN1Q9UKV3 1341 aaKnown RBP6.64□□□□□ -1.35
HIGD1C-201ENST00000398455 MSX1P28360 303 aa6.63□□□□□ -1.35
HIGD1C-201ENST00000398455 PCBP4P57723 403 aaKnown RBP6.63□□□□□ -1.35
HIGD1C-201ENST00000398455 CLDN10P78369 228 aa6.63□□□□□ -1.35
HIGD1C-201ENST00000398455 TRIM28Q13263 835 aaKnown RBP6.63□□□□□ -1.35
HIGD1C-201ENST00000398455 LBRQ14739 615 aaKnown RBP6.63□□□□□ -1.35
HIGD1C-201ENST00000398455 LARP1Q6PKG0 1096 aaKnown RBP6.63□□□□□ -1.35
HIGD1C-201ENST00000398455 TRIM50Q86XT4 487 aa6.63□□□□□ -1.35
HIGD1C-201ENST00000398455 PCDHGA11Q9Y5H2 935 aa6.63□□□□□ -1.35
HIGD1C-201ENST00000398455 ZBTB7BO15156 539 aaPredicted RBP6.62□□□□□ -1.35
HIGD1C-201ENST00000398455 ATP1A2P50993 1020 aa6.62□□□□□ -1.35
HIGD1C-201ENST00000398455 CRTC2Q53ET0 693 aaPredicted RBP6.62□□□□□ -1.35
HIGD1C-201ENST00000398455 ZNF594Q96JF6 807 aaPredicted RBP6.62□□□□□ -1.35
HIGD1C-201ENST00000398455 ARHGEF10LQ9HCE6 1279 aa6.62□□□□□ -1.35
HIGD1C-201ENST00000398455 DNAAF2Q9NVR5 837 aaKnown RBP6.62□□□□□ -1.35
HIGD1C-201ENST00000398455 HCN2Q9UL51 889 aa6.62□□□□□ -1.35
HIGD1C-201ENST00000398455 PSME1Q06323 249 aa6.61□□□□□ -1.35
HIGD1C-201ENST00000398455 PTK7Q13308 1070 aa6.61□□□□□ -1.35
HIGD1C-201ENST00000398455 KRTAP5-3Q6L8H2 238 aa6.61□□□□□ -1.35
HIGD1C-201ENST00000398455 LARGE2Q8N3Y3 721 aa6.61□□□□□ -1.35
HIGD1C-201ENST00000398455 RAB6BQ9NRW1 208 aa6.61□□□□□ -1.35
HIGD1C-201ENST00000398455 KIAA1024Q9UPX6 916 aa6.61□□□□□ -1.35
HIGD1C-201ENST00000398455 FAM196BA6NMK8 535 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L15C9J2P7 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L10C9JJH3 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L13C9JLJ4 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L12C9JPN9 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L11C9JVI0 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L21D6R901 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L18D6R9N7 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L22D6RA61 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L17D6RBQ6 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L19D6RCP7 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L20D6RJB6 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 ATG7O95352 703 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 STAU1O95793 577 aaKnown RBP6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 SSTR4P31391 388 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 USP17L24Q0WX57 530 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 MBTPS1Q14703 1052 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 CCDC102BQ68D86 513 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 CYP2U1Q7Z449 544 aa6.6□□□□□ -1.35
HIGD1C-201ENST00000398455 CD33P20138 364 aa6.59□□□□□ -1.35
HIGD1C-201ENST00000398455 COL9A3Q14050 684 aaPredicted RBP6.59□□□□□ -1.35
HIGD1C-201ENST00000398455 ADGRE1Q14246 886 aa6.59□□□□□ -1.35
HIGD1C-201ENST00000398455 RGS22Q8NE09 1264 aa6.59□□□□□ -1.35
HIGD1C-201ENST00000398455 TPCN2Q8NHX9 752 aa6.59□□□□□ -1.35
HIGD1C-201ENST00000398455 NOVA2Q9UNW9 492 aaKnown RBP6.59□□□□□ -1.35
HIGD1C-201ENST00000398455 GNRH1P01148 92 aa6.58□□□□□ -1.36
HIGD1C-201ENST00000398455 CENPCQ03188 943 aa6.58□□□□□ -1.36
HIGD1C-201ENST00000398455 DPYDQ12882 1025 aa6.58□□□□□ -1.36
HIGD1C-201ENST00000398455 C8orf86Q6ZUL3 223 aa6.58□□□□□ -1.36
HIGD1C-201ENST00000398455 ANKMY2Q8IV38 441 aa6.58□□□□□ -1.36
HIGD1C-201ENST00000398455 ZCCHC2Q9C0B9 1178 aaKnown RBP6.58□□□□□ -1.36
HIGD1C-201ENST00000398455 RBM19Q9Y4C8 960 aaKnown RBP6.58□□□□□ -1.36
HIGD1C-201ENST00000398455 OAS3Q9Y6K5 1087 aaKnown RBP6.58□□□□□ -1.36
HIGD1C-201ENST00000398455 C9orf172C9J069 976 aa6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 DKK1O94907 266 aa6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 SELPP16109 830 aa6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 SCNN1DP51172 638 aa6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 GDF10P55107 478 aa6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 ELOAQ14241 798 aaKnown RBP6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 C4orf17Q53FE4 359 aa6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 TXNRD3Q86VQ6 643 aa6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 SIX5Q8N196 739 aa6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 FAM200AQ8TCP9 573 aa6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 ETNK1Q9HBU6 452 aa6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 ZMIZ1Q9ULJ6 1067 aa6.57□□□□□ -1.36
HIGD1C-201ENST00000398455 SFI1A8K8P3 1242 aa6.56□□□□□ -1.36
HIGD1C-201ENST00000398455 TMEM229AB2RXF0 380 aa6.56□□□□□ -1.36
HIGD1C-201ENST00000398455 INHAP05111 366 aa6.56□□□□□ -1.36
HIGD1C-201ENST00000398455 SEC13P55735 322 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms