RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ZBTB1Q9Y2K1 713 aa17.11■□□□□ 0.33
SEC13-209ENST00000397117 COL15A1P39059 1388 aa17.1■□□□□ 0.33
SEC13-209ENST00000397117 SERPINB2P05120 415 aa17.1■□□□□ 0.33
SEC13-209ENST00000397117 LMNB1P20700 586 aa17.1■□□□□ 0.33
SEC13-209ENST00000397117 VSIG10Q8N0Z9 540 aa17.1■□□□□ 0.33
SEC13-209ENST00000397117 SMC1BQ8NDV3 1235 aa17.1■□□□□ 0.33
SEC13-209ENST00000397117 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
SEC13-209ENST00000397117 COL13A1Q5TAT6 717 aaPredicted RBP17.09■□□□□ 0.33
SEC13-209ENST00000397117 TTLL6Q8N841 843 aa17.09■□□□□ 0.33
SEC13-209ENST00000397117 TSR2Q969E8 191 aaKnown RBP17.09■□□□□ 0.33
SEC13-209ENST00000397117 CFAP44Q96MT7 982 aa17.09■□□□□ 0.33
SEC13-209ENST00000397117 FANCIQ9NVI1 1328 aa17.09■□□□□ 0.33
SEC13-209ENST00000397117 GLTPD2A6NH11 291 aa17.08■□□□□ 0.32
SEC13-209ENST00000397117 RCAN3Q9UKA8 241 aa17.08■□□□□ 0.32
SEC13-209ENST00000397117 C2CD5Q86YS7 1000 aa17.07■□□□□ 0.32
SEC13-209ENST00000397117 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
SEC13-209ENST00000397117 ZNF853P0CG23 659 aa17.07■□□□□ 0.32
SEC13-209ENST00000397117 VEGFAP15692 232 aaPredicted RBP17.07■□□□□ 0.32
SEC13-209ENST00000397117 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
SEC13-209ENST00000397117 ANKRD31Q8N7Z5 1873 aa17.06■□□□□ 0.32
SEC13-209ENST00000397117 NFKBIEO00221 500 aa17.06■□□□□ 0.32
SEC13-209ENST00000397117 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
SEC13-209ENST00000397117 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
SEC13-209ENST00000397117 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
SEC13-209ENST00000397117 CARMIL3Q8ND23 1372 aa17.05■□□□□ 0.32
SEC13-209ENST00000397117 DICER1Q9UPY3 1922 aaKnown RBP17.05■□□□□ 0.32
SEC13-209ENST00000397117 H0YIN7 160 aa17.05■□□□□ 0.32
SEC13-209ENST00000397117 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
SEC13-209ENST00000397117 GTF3C3Q9Y5Q9 886 aa17.05■□□□□ 0.32
SEC13-209ENST00000397117 POTECB2RU33 542 aa17.04■□□□□ 0.32
SEC13-209ENST00000397117 CHL1O00533 1208 aa17.04■□□□□ 0.32
SEC13-209ENST00000397117 TEFQ10587 303 aa17.04■□□□□ 0.32
SEC13-209ENST00000397117 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
SEC13-209ENST00000397117 EXOSC9Q06265 439 aaKnown RBP17.03■□□□□ 0.32
SEC13-209ENST00000397117 TAF7Q15545 349 aaPredicted RBP17.03■□□□□ 0.32
SEC13-209ENST00000397117 TSPYL4Q9UJ04 414 aa17.03■□□□□ 0.32
SEC13-209ENST00000397117 FER1L6Q2WGJ9 1857 aa17.03■□□□□ 0.32
SEC13-209ENST00000397117 A0A087WZG4 1122 aa17.03■□□□□ 0.32
SEC13-209ENST00000397117 STARD3NLO95772 234 aa17.03■□□□□ 0.32
SEC13-209ENST00000397117 CT47B1P0C2W7 299 aaPredicted RBP17.03■□□□□ 0.32
SEC13-209ENST00000397117 NEFLP07196 543 aa17.02■□□□□ 0.31
SEC13-209ENST00000397117 TBC1D9BQ66K14 1250 aa17.02■□□□□ 0.31
SEC13-209ENST00000397117 BICDL1Q6ZP65 573 aa17.02■□□□□ 0.31
SEC13-209ENST00000397117 BABAM1Q9NWV8 329 aa17.02■□□□□ 0.31
SEC13-209ENST00000397117 SIPA1L3O60292 1781 aaPredicted RBP17.02■□□□□ 0.31
SEC13-209ENST00000397117 ZNF496Q96IT1 587 aaPredicted RBP17.01■□□□□ 0.31
SEC13-209ENST00000397117 BRIP1Q9BX63 1249 aa17.01■□□□□ 0.31
SEC13-209ENST00000397117 MIS18AQ9NYP9 233 aa17.01■□□□□ 0.31
SEC13-209ENST00000397117 PDZRN3Q9UPQ7 1066 aa17.01■□□□□ 0.31
SEC13-209ENST00000397117 TTC5Q8N0Z6 440 aa17■□□□□ 0.31
SEC13-209ENST00000397117 COL11A2P13942 1736 aaPredicted RBP17■□□□□ 0.31
SEC13-209ENST00000397117 PCNTO95613 3336 aa17■□□□□ 0.31
SEC13-209ENST00000397117 PDE6BP35913 854 aa16.99■□□□□ 0.31
SEC13-209ENST00000397117 ZNF622Q969S3 477 aaKnown RBP eCLIP16.99■□□□□ 0.31
SEC13-209ENST00000397117 TEX13AQ9BXU3 409 aaPredicted RBP16.99■□□□□ 0.31
SEC13-209ENST00000397117 SCN7AQ01118 1682 aa16.99■□□□□ 0.31
SEC13-209ENST00000397117 HEG1Q9ULI3 1381 aa16.99■□□□□ 0.31
SEC13-209ENST00000397117 BTBD11A6QL63 1104 aa16.99■□□□□ 0.31
SEC13-209ENST00000397117 PRR5LQ6MZQ0 368 aa16.99■□□□□ 0.31
SEC13-209ENST00000397117 DPY19L2Q6NUT2 758 aa16.99■□□□□ 0.31
SEC13-209ENST00000397117 ZNF790Q6PG37 636 aa16.99■□□□□ 0.31
SEC13-209ENST00000397117 C21orf2O43822 256 aa16.98■□□□□ 0.31
SEC13-209ENST00000397117 TNS4Q8IZW8 715 aa16.98■□□□□ 0.31
SEC13-209ENST00000397117 TBC1D2BQ9UPU7 963 aa16.98■□□□□ 0.31
SEC13-209ENST00000397117 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
SEC13-209ENST00000397117 IL6STP40189 918 aaPredicted RBP16.97■□□□□ 0.31
SEC13-209ENST00000397117 CCDC24Q8N4L8 307 aa16.97■□□□□ 0.31
SEC13-209ENST00000397117 LTBP3Q9NS15 1303 aa16.97■□□□□ 0.31
SEC13-209ENST00000397117 TWISTNBQ3B726 338 aaPredicted RBP16.96■□□□□ 0.31
SEC13-209ENST00000397117 ZNF219Q9P2Y4 722 aaPredicted RBP16.96■□□□□ 0.31
SEC13-209ENST00000397117 CACNA1SQ13698 1873 aa16.96■□□□□ 0.3
SEC13-209ENST00000397117 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.3
SEC13-209ENST00000397117 A1BGP04217 495 aa16.96■□□□□ 0.3
SEC13-209ENST00000397117 HSPA1AP0DMV8 641 aaKnown RBP16.96■□□□□ 0.3
SEC13-209ENST00000397117 HSPA1BP0DMV9 641 aaKnown RBP16.96■□□□□ 0.3
SEC13-209ENST00000397117 RARSP54136 660 aaKnown RBP16.96■□□□□ 0.3
SEC13-209ENST00000397117 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.3
SEC13-209ENST00000397117 ERFEQ4G0M1 354 aa16.96■□□□□ 0.3
SEC13-209ENST00000397117 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.96■□□□□ 0.3
SEC13-209ENST00000397117 C8orf58Q8NAV2 365 aa16.96■□□□□ 0.3
SEC13-209ENST00000397117 ZNF428Q96B54 188 aa16.96■□□□□ 0.3
SEC13-209ENST00000397117 RNF123Q5XPI4 1314 aa16.95■□□□□ 0.3
SEC13-209ENST00000397117 CAMTA2O94983 1202 aa16.95■□□□□ 0.3
SEC13-209ENST00000397117 ARFGEF2Q9Y6D5 1785 aa16.94■□□□□ 0.3
SEC13-209ENST00000397117 CAPN15O75808 1086 aa16.94■□□□□ 0.3
SEC13-209ENST00000397117 STYK1Q6J9G0 422 aa16.94■□□□□ 0.3
SEC13-209ENST00000397117 TSPYL6Q8N831 410 aa16.94■□□□□ 0.3
SEC13-209ENST00000397117 FMNL2Q96PY5 1086 aa16.94■□□□□ 0.3
SEC13-209ENST00000397117 VAMP4O75379 141 aa16.93■□□□□ 0.3
SEC13-209ENST00000397117 BCAR3O75815 825 aa16.93■□□□□ 0.3
SEC13-209ENST00000397117 SRGNP10124 158 aa16.93■□□□□ 0.3
SEC13-209ENST00000397117 CNKSR1Q969H4 720 aa16.93■□□□□ 0.3
SEC13-209ENST00000397117 SETDB2Q96T68 719 aa16.93■□□□□ 0.3
SEC13-209ENST00000397117 ZNF330Q9Y3S2 320 aaPredicted RBP16.93■□□□□ 0.3
SEC13-209ENST00000397117 BCORQ6W2J9 1755 aa16.93■□□□□ 0.3
SEC13-209ENST00000397117 KCNQ3O43525 872 aa16.92■□□□□ 0.3
SEC13-209ENST00000397117 CHADLQ6NUI6 762 aa16.92■□□□□ 0.3
SEC13-209ENST00000397117 CNBD1Q8NA66 436 aa16.92■□□□□ 0.3
SEC13-209ENST00000397117 TAOK3Q9H2K8 898 aa16.92■□□□□ 0.3
SEC13-209ENST00000397117 SMC4Q9NTJ3 1288 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms