RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 EP400Q96L91 3159 aa15.97■□□□□ 0.15
TRIM39-204ENST00000396548 LOC102724428A0A0B4J2F2 783 aa15.97■□□□□ 0.15
TRIM39-204ENST00000396548 NBPF7P0C2Y1 421 aaPredicted RBP15.97■□□□□ 0.15
TRIM39-204ENST00000396548 SIK1P57059 783 aa15.97■□□□□ 0.15
TRIM39-204ENST00000396548 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
TRIM39-204ENST00000396548 NEURL1BA8MQ27 555 aa15.97■□□□□ 0.15
TRIM39-204ENST00000396548 CWF19L2Q2TBE0 894 aaKnown RBP15.97■□□□□ 0.15
TRIM39-204ENST00000396548 INTS5Q6P9B9 1019 aaKnown RBP15.97■□□□□ 0.15
TRIM39-204ENST00000396548 RIC3Q7Z5B4 369 aa15.97■□□□□ 0.15
TRIM39-204ENST00000396548 FAM182BQ5T319 152 aa15.96■□□□□ 0.15
TRIM39-204ENST00000396548 ZNF772Q68DY9 489 aaPredicted RBP15.96■□□□□ 0.15
TRIM39-204ENST00000396548 PDZRN3Q9UPQ7 1066 aa15.96■□□□□ 0.15
TRIM39-204ENST00000396548 DCTPP1Q9H773 170 aa15.96■□□□□ 0.15
TRIM39-204ENST00000396548 NUP98P52948 1817 aa15.96■□□□□ 0.14
TRIM39-204ENST00000396548 BCORQ6W2J9 1755 aa15.95■□□□□ 0.14
TRIM39-204ENST00000396548 NUCB1Q02818 461 aa15.95■□□□□ 0.14
TRIM39-204ENST00000396548 GCC1Q96CN9 775 aa15.95■□□□□ 0.14
TRIM39-204ENST00000396548 ATP8B2P98198 1209 aa15.95■□□□□ 0.14
TRIM39-204ENST00000396548 LRRFIP2Q9Y608 721 aaKnown RBP15.95■□□□□ 0.14
TRIM39-204ENST00000396548 COL15A1P39059 1388 aa15.94■□□□□ 0.14
TRIM39-204ENST00000396548 A0A0G2JS52 829 aa15.94■□□□□ 0.14
TRIM39-204ENST00000396548 MYT1Q01538 1121 aa15.94■□□□□ 0.14
TRIM39-204ENST00000396548 RGS17Q9UGC6 210 aaPredicted RBP15.94■□□□□ 0.14
TRIM39-204ENST00000396548 ZBTB1Q9Y2K1 713 aa15.94■□□□□ 0.14
TRIM39-204ENST00000396548 UBTFL1P0CB47 393 aaPredicted RBP15.94■□□□□ 0.14
TRIM39-204ENST00000396548 GCKRQ14397 625 aa15.94■□□□□ 0.14
TRIM39-204ENST00000396548 KAZALD1Q96I82 304 aa15.94■□□□□ 0.14
TRIM39-204ENST00000396548 MYD88Q99836 296 aa15.94■□□□□ 0.14
TRIM39-204ENST00000396548 ATP6V1AP38606 617 aa15.93■□□□□ 0.14
TRIM39-204ENST00000396548 RBM6P78332 1123 aaKnown RBP15.93■□□□□ 0.14
TRIM39-204ENST00000396548 IL6STP40189 918 aaPredicted RBP15.93■□□□□ 0.14
TRIM39-204ENST00000396548 PDE4AP27815 886 aa15.93■□□□□ 0.14
TRIM39-204ENST00000396548 CASP7P55210 303 aa15.93■□□□□ 0.14
TRIM39-204ENST00000396548 PNMA6EA0A0J9YXQ4 647 aa15.92■□□□□ 0.14
TRIM39-204ENST00000396548 GRM8O00222 908 aa15.92■□□□□ 0.14
TRIM39-204ENST00000396548 EIF5P55010 431 aaKnown RBP15.92■□□□□ 0.14
TRIM39-204ENST00000396548 MTX1Q13505 466 aa15.92■□□□□ 0.14
TRIM39-204ENST00000396548 POLA2Q14181 598 aa15.92■□□□□ 0.14
TRIM39-204ENST00000396548 CRKLP46109 303 aaKnown RBP15.92■□□□□ 0.14
TRIM39-204ENST00000396548 TSHZ2Q9NRE2 1034 aa15.92■□□□□ 0.14
TRIM39-204ENST00000396548 SSH3Q8TE77 659 aa15.91■□□□□ 0.14
TRIM39-204ENST00000396548 NEXNQ0ZGT2 675 aa15.91■□□□□ 0.14
TRIM39-204ENST00000396548 LINC00116Q8NCU8 138 aa15.91■□□□□ 0.14
TRIM39-204ENST00000396548 ISCA1Q9BUE6 129 aa15.91■□□□□ 0.14
TRIM39-204ENST00000396548 BCL11BQ9C0K0 894 aaPredicted RBP15.91■□□□□ 0.14
TRIM39-204ENST00000396548 CCDC87Q9NVE4 849 aa15.91■□□□□ 0.14
TRIM39-204ENST00000396548 MAP3K15Q6ZN16 1313 aa15.91■□□□□ 0.14
TRIM39-204ENST00000396548 KRT27Q7Z3Y8 459 aa15.9■□□□□ 0.14
TRIM39-204ENST00000396548 TRIM28Q13263 835 aaKnown RBP15.89■□□□□ 0.13
TRIM39-204ENST00000396548 CHD1LQ86WJ1 897 aa15.89■□□□□ 0.13
TRIM39-204ENST00000396548 SUCLG2Q96I99 432 aa15.89■□□□□ 0.13
TRIM39-204ENST00000396548 ZBTB3Q9H5J0 574 aa15.89■□□□□ 0.13
TRIM39-204ENST00000396548 SCN7AQ01118 1682 aa15.89■□□□□ 0.13
TRIM39-204ENST00000396548 C4BP0C0L5 1744 aa15.89■□□□□ 0.13
TRIM39-204ENST00000396548 CNTNAP4Q9C0A0 1308 aa15.89■□□□□ 0.13
TRIM39-204ENST00000396548 H7C1W4 665 aa15.89■□□□□ 0.13
TRIM39-204ENST00000396548 TCIRG1Q13488 830 aa15.89■□□□□ 0.13
TRIM39-204ENST00000396548 C9orf78Q9NZ63 289 aaPredicted RBP15.89■□□□□ 0.13
TRIM39-204ENST00000396548 ERVV-1B6SEH8 477 aa15.88■□□□□ 0.13
TRIM39-204ENST00000396548 ATP5J2-PTCD1G3V325 749 aa15.88■□□□□ 0.13
TRIM39-204ENST00000396548 FAM196AQ6ZSG2 479 aa15.88■□□□□ 0.13
TRIM39-204ENST00000396548 GIGYF2Q6Y7W6 1299 aaKnown RBP15.88■□□□□ 0.13
TRIM39-204ENST00000396548 HMMRO75330 724 aa15.87■□□□□ 0.13
TRIM39-204ENST00000396548 HLFQ16534 295 aa15.87■□□□□ 0.13
TRIM39-204ENST00000396548 PPP1R42Q7Z4L9 355 aa15.87■□□□□ 0.13
TRIM39-204ENST00000396548 CCDC191Q8NCU4 936 aa15.87■□□□□ 0.13
TRIM39-204ENST00000396548 TNS1Q9HBL0 1735 aaKnown RBP15.87■□□□□ 0.13
TRIM39-204ENST00000396548 RC3H1Q5TC82 1133 aaKnown RBP15.87■□□□□ 0.13
TRIM39-204ENST00000396548 KIF6Q6ZMV9 814 aa15.87■□□□□ 0.13
TRIM39-204ENST00000396548 EPHA10Q5JZY3 1008 aa15.86■□□□□ 0.13
TRIM39-204ENST00000396548 TUBGCP6Q96RT7 1819 aa15.86■□□□□ 0.13
TRIM39-204ENST00000396548 C4AP0C0L4 1744 aa15.86■□□□□ 0.13
TRIM39-204ENST00000396548 RGS3P49796 1198 aa15.86■□□□□ 0.13
TRIM39-204ENST00000396548 RABL6Q3YEC7 729 aaPredicted RBP15.86■□□□□ 0.13
TRIM39-204ENST00000396548 BICC1Q9H694 974 aaKnown RBP15.86■□□□□ 0.13
TRIM39-204ENST00000396548 ANKRD45Q5TZF3 282 aa15.85■□□□□ 0.13
TRIM39-204ENST00000396548 CWC25Q9NXE8 425 aaPredicted RBP15.85■□□□□ 0.13
TRIM39-204ENST00000396548 HDAC5Q9UQL6 1122 aa15.85■□□□□ 0.13
TRIM39-204ENST00000396548 KCNQ4P56696 695 aa15.85■□□□□ 0.13
TRIM39-204ENST00000396548 CAMTA2O94983 1202 aa15.85■□□□□ 0.13
TRIM39-204ENST00000396548 DZIP3Q86Y13 1208 aaKnown RBP15.85■□□□□ 0.13
TRIM39-204ENST00000396548 NOP58Q9Y2X3 529 aaKnown RBP15.85■□□□□ 0.13
TRIM39-204ENST00000396548 RGPD3A6NKT7 1758 aaPredicted RBP15.84■□□□□ 0.13
TRIM39-204ENST00000396548 RGPD4Q7Z3J3 1758 aa15.84■□□□□ 0.13
TRIM39-204ENST00000396548 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
TRIM39-204ENST00000396548 RXRBP28702 533 aa15.84■□□□□ 0.13
TRIM39-204ENST00000396548 POTEAQ6S8J7 498 aa15.84■□□□□ 0.13
TRIM39-204ENST00000396548 A0A087WZG4 1122 aa15.84■□□□□ 0.13
TRIM39-204ENST00000396548 FOXO4P98177 505 aa15.84■□□□□ 0.13
TRIM39-204ENST00000396548 ZNF34Q8IZ26 560 aa15.84■□□□□ 0.13
TRIM39-204ENST00000396548 LNPKQ9C0E8 428 aa15.84■□□□□ 0.13
TRIM39-204ENST00000396548 LAMB2P55268 1798 aa15.84■□□□□ 0.13
TRIM39-204ENST00000396548 SRGAP3O43295 1099 aa15.83■□□□□ 0.12
TRIM39-204ENST00000396548 UBE3BQ7Z3V4 1068 aa15.83■□□□□ 0.12
TRIM39-204ENST00000396548 LRRC4BQ9NT99 713 aa15.83■□□□□ 0.12
TRIM39-204ENST00000396548 TBC1D2BQ9UPU7 963 aa15.83■□□□□ 0.12
TRIM39-204ENST00000396548 SALL3Q9BXA9 1300 aa15.82■□□□□ 0.12
TRIM39-204ENST00000396548 COL24A1Q17RW2 1714 aa15.82■□□□□ 0.12
TRIM39-204ENST00000396548 DDX60Q8IY21 1712 aaKnown RBP15.82■□□□□ 0.12
TRIM39-204ENST00000396548 C8orf34Q49A92 452 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms