RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 UBR1Q8IWV7 1749 aa10.01□□□□□ -0.81
NDE1-202ENST00000396355 TRIM37O94972 964 aa10□□□□□ -0.81
NDE1-202ENST00000396355 KLHL40Q2TBA0 621 aa10□□□□□ -0.81
NDE1-202ENST00000396355 NOC3LQ8WTT2 800 aaKnown RBP10□□□□□ -0.81
NDE1-202ENST00000396355 TBC1D32Q96NH3 1257 aa10□□□□□ -0.81
NDE1-202ENST00000396355 SRCAPQ6ZRS2 3230 aa10□□□□□ -0.81
NDE1-202ENST00000396355 ST18O60284 1047 aa10□□□□□ -0.81
NDE1-202ENST00000396355 ADAMTS13Q76LX8 1427 aa10□□□□□ -0.81
NDE1-202ENST00000396355 ZNF500O60304 480 aaPredicted RBP10□□□□□ -0.81
NDE1-202ENST00000396355 NEBLO76041 1014 aa10□□□□□ -0.81
NDE1-202ENST00000396355 MAP2K2P36507 400 aa10□□□□□ -0.81
NDE1-202ENST00000396355 HSP90B2PQ58FF3 399 aa10□□□□□ -0.81
NDE1-202ENST00000396355 TMCO3Q6UWJ1 677 aa10□□□□□ -0.81
NDE1-202ENST00000396355 FILIP1Q7Z7B0 1213 aa10□□□□□ -0.81
NDE1-202ENST00000396355 FNBP4Q8N3X1 1017 aaPredicted RBP9.99□□□□□ -0.81
NDE1-202ENST00000396355 DLG5Q8TDM6 1919 aa9.99□□□□□ -0.81
NDE1-202ENST00000396355 NAA30Q147X3 362 aaPredicted RBP9.99□□□□□ -0.81
NDE1-202ENST00000396355 CTR9Q6PD62 1173 aa9.99□□□□□ -0.81
NDE1-202ENST00000396355 FAM43BQ6ZT52 329 aaPredicted RBP9.99□□□□□ -0.81
NDE1-202ENST00000396355 TERF2IPQ9NYB0 399 aa9.99□□□□□ -0.81
NDE1-202ENST00000396355 NOB1Q9ULX3 412 aaKnown RBP9.99□□□□□ -0.81
NDE1-202ENST00000396355 LRP6O75581 1613 aa9.99□□□□□ -0.81
NDE1-202ENST00000396355 GOLGA6L19H0YKK7 550 aa9.99□□□□□ -0.81
NDE1-202ENST00000396355 HCLS1P14317 486 aaPredicted RBP9.99□□□□□ -0.81
NDE1-202ENST00000396355 YY1P25490 414 aa9.99□□□□□ -0.81
NDE1-202ENST00000396355 ATF7IPQ6VMQ6 1270 aa9.99□□□□□ -0.81
NDE1-202ENST00000396355 K7ELQ4 463 aaPredicted RBP9.98□□□□□ -0.81
NDE1-202ENST00000396355 TRIM66O15016 1216 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 TMEM57Q8N5G2 664 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 RBM42Q9BTD8 480 aaKnown RBP9.98□□□□□ -0.81
NDE1-202ENST00000396355 ANTXR1Q9H6X2 564 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 C1orf167Q5SNV9 1468 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
NDE1-202ENST00000396355 ROBO2Q9HCK4 1378 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 DIAPH1O60610 1272 aaKnown RBP9.98□□□□□ -0.81
NDE1-202ENST00000396355 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.98□□□□□ -0.81
NDE1-202ENST00000396355 ABTB2Q8N961 1025 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 CCDC34Q96HJ3 373 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 PPP1R9BQ96SB3 815 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 SLC24A3Q9HC58 644 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 POLKQ9UBT6 870 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 JRKLQ9Y4A0 524 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 A0A1B0GUL7 405 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 BECN2A8MW95 431 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 FIBPO43427 364 aa9.98□□□□□ -0.81
NDE1-202ENST00000396355 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.98□□□□□ -0.81
NDE1-202ENST00000396355 CALR3Q96L12 384 aaKnown RBP9.98□□□□□ -0.81
NDE1-202ENST00000396355 CT47B1P0C2W7 299 aaPredicted RBP9.97□□□□□ -0.81
NDE1-202ENST00000396355 BMS1Q14692 1282 aaKnown RBP9.97□□□□□ -0.81
NDE1-202ENST00000396355 ICE2Q659A1 982 aa9.97□□□□□ -0.81
NDE1-202ENST00000396355 PHACTR3Q96KR7 559 aa9.97□□□□□ -0.81
NDE1-202ENST00000396355 ELL2O00472 640 aaPredicted RBP9.97□□□□□ -0.81
NDE1-202ENST00000396355 UBXN4Q92575 508 aa9.97□□□□□ -0.81
NDE1-202ENST00000396355 CHAMP1Q96JM3 812 aa9.97□□□□□ -0.81
NDE1-202ENST00000396355 THUMPD2Q9BTF0 503 aaKnown RBP9.97□□□□□ -0.81
NDE1-202ENST00000396355 CPSF2Q9P2I0 782 aaKnown RBP9.97□□□□□ -0.81
NDE1-202ENST00000396355 CEP83Q9Y592 693 aa9.97□□□□□ -0.81
NDE1-202ENST00000396355 MST1RQ04912 1400 aa9.97□□□□□ -0.81
NDE1-202ENST00000396355 PTPRUQ92729 1446 aa9.97□□□□□ -0.81
NDE1-202ENST00000396355 RAD51AP2Q09MP3 1159 aa9.97□□□□□ -0.81
NDE1-202ENST00000396355 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.97□□□□□ -0.81
NDE1-202ENST00000396355 DLC1Q96QB1 1528 aa9.96□□□□□ -0.81
NDE1-202ENST00000396355 RGS12O14924 1447 aa9.96□□□□□ -0.81
NDE1-202ENST00000396355 HS1BP3Q53T59 392 aa9.96□□□□□ -0.81
NDE1-202ENST00000396355 SYT10Q6XYQ8 523 aa9.96□□□□□ -0.81
NDE1-202ENST00000396355 ST7Q9NRC1 585 aa9.96□□□□□ -0.81
NDE1-202ENST00000396355 ZBTB40Q9NUA8 1239 aa9.96□□□□□ -0.81
NDE1-202ENST00000396355 ATP7BP35670 1465 aa9.96□□□□□ -0.81
NDE1-202ENST00000396355 IL16Q14005 1332 aa9.96□□□□□ -0.81
NDE1-202ENST00000396355 MBD3O95983 291 aa9.96□□□□□ -0.82
NDE1-202ENST00000396355 PRKAR2BP31323 418 aa9.96□□□□□ -0.82
NDE1-202ENST00000396355 TERF2Q15554 542 aa9.96□□□□□ -0.82
NDE1-202ENST00000396355 TXLNBQ8N3L3 684 aa9.96□□□□□ -0.82
NDE1-202ENST00000396355 CCDC102AQ96A19 550 aa9.96□□□□□ -0.82
NDE1-202ENST00000396355 HDAC1Q13547 482 aaPredicted RBP9.96□□□□□ -0.82
NDE1-202ENST00000396355 EFCC1Q9HA90 598 aa9.96□□□□□ -0.82
NDE1-202ENST00000396355 EMILIN1Q9Y6C2 1016 aa9.96□□□□□ -0.82
NDE1-202ENST00000396355 HMOX1P09601 288 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 ATP6V1AP38606 617 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 PHACTR2O75167 634 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 CCDC172P0C7W6 258 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 CASQ1P31415 396 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 PTPN14Q15678 1187 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 ZSCAN26Q16670 478 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 DNAJC21Q5F1R6 531 aaKnown RBP9.95□□□□□ -0.82
NDE1-202ENST00000396355 HDGFL2Q7Z4V5 671 aaPredicted RBP9.95□□□□□ -0.82
NDE1-202ENST00000396355 CPSF1Q10570 1443 aaKnown RBP9.95□□□□□ -0.82
NDE1-202ENST00000396355 MON2Q7Z3U7 1717 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 CAPN2P17655 700 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 TOM1L2Q6ZVM7 507 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 SMC5Q8IY18 1101 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 CIZ1Q9ULV3 898 aaPredicted RBP9.95□□□□□ -0.82
NDE1-202ENST00000396355 DDX19BQ9UMR2 479 aa9.95□□□□□ -0.82
NDE1-202ENST00000396355 FRMD3A2A2Y4 597 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 ECM2O94769 699 aaPredicted RBP9.94□□□□□ -0.82
NDE1-202ENST00000396355 TSPYL6Q8N831 410 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 SYTL4Q96C24 671 aaPredicted RBP9.94□□□□□ -0.82
NDE1-202ENST00000396355 FEZ2Q9UHY8 353 aaPredicted RBP9.94□□□□□ -0.82
NDE1-202ENST00000396355 SPATA31A3Q5VYP0 1347 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 DHX16O60231 1041 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms