RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 AP5Z1O43299 807 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 LIG1P18858 919 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 CLCN6P51797 869 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 CCDC146Q8IYE0 955 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 CABP1Q9NZU7 370 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 ADAMTS13Q76LX8 1427 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 ROBO2Q9HCK4 1378 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 ERBB3P21860 1342 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 EIF3CLB5ME19 914 aaKnown RBP11.45□□□□□ -0.58
CDRT1-204ENST00000395906 ATP8B1O43520 1251 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 ACTN2P35609 894 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 NUCB1Q02818 461 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 TBC1D9Q6ZT07 1266 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 EXOC4Q96A65 974 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 EIF3CQ99613 913 aaKnown RBP11.45□□□□□ -0.58
CDRT1-204ENST00000395906 NRXN3Q9Y4C0 1643 aa11.45□□□□□ -0.58
CDRT1-204ENST00000395906 CCDC171Q6TFL3 1326 aa11.44□□□□□ -0.58
CDRT1-204ENST00000395906 KIF2AO00139 706 aaPredicted RBP11.44□□□□□ -0.58
CDRT1-204ENST00000395906 SOCS7O14512 581 aa11.44□□□□□ -0.58
CDRT1-204ENST00000395906 ZRANB2O95218 330 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDRT1-204ENST00000395906 ANKLE2Q86XL3 938 aa11.44□□□□□ -0.58
CDRT1-204ENST00000395906 ITFG2Q969R8 447 aa11.44□□□□□ -0.58
CDRT1-204ENST00000395906 EXOC6BQ9Y2D4 811 aa11.44□□□□□ -0.58
CDRT1-204ENST00000395906 DMRT2Q9Y5R5 561 aa11.44□□□□□ -0.58
CDRT1-204ENST00000395906 QRICH2Q9H0J4 1663 aa11.44□□□□□ -0.58
CDRT1-204ENST00000395906 ADAMTSL3P82987 1691 aa11.44□□□□□ -0.58
CDRT1-204ENST00000395906 U2SURPO15042 1029 aaKnown RBP11.44□□□□□ -0.58
CDRT1-204ENST00000395906 KCNA6P17658 529 aa11.44□□□□□ -0.58
CDRT1-204ENST00000395906 OTUD6BQ8N6M0 293 aa11.44□□□□□ -0.58
CDRT1-204ENST00000395906 ARHGEF28Q8N1W1 1705 aaKnown RBP11.44□□□□□ -0.58
CDRT1-204ENST00000395906 H0YHG0 523 aa11.43□□□□□ -0.58
CDRT1-204ENST00000395906 MX1P20591 662 aa11.43□□□□□ -0.58
CDRT1-204ENST00000395906 FBLN1P23142 703 aa11.43□□□□□ -0.58
CDRT1-204ENST00000395906 SARNPP82979 210 aaKnown RBP11.43□□□□□ -0.58
CDRT1-204ENST00000395906 TACO1Q9BSH4 297 aaKnown RBP11.43□□□□□ -0.58
CDRT1-204ENST00000395906 ARGLU1Q9NWB6 273 aaPredicted RBP11.43□□□□□ -0.58
CDRT1-204ENST00000395906 ST18O60284 1047 aa11.43□□□□□ -0.58
CDRT1-204ENST00000395906 CORO7P57737 925 aa11.43□□□□□ -0.58
CDRT1-204ENST00000395906 LEKR1Q6ZMV7 388 aa11.43□□□□□ -0.58
CDRT1-204ENST00000395906 BORCS6Q96GS4 357 aa11.43□□□□□ -0.58
CDRT1-204ENST00000395906 MYO3AQ8NEV4 1616 aa11.43□□□□□ -0.58
CDRT1-204ENST00000395906 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
CDRT1-204ENST00000395906 SETD1BQ9UPS6 1966 aaKnown RBP11.42□□□□□ -0.58
CDRT1-204ENST00000395906 BRD1O95696 1058 aa11.42□□□□□ -0.58
CDRT1-204ENST00000395906 TMCO3Q6UWJ1 677 aa11.42□□□□□ -0.58
CDRT1-204ENST00000395906 CCDC186Q7Z3E2 898 aa11.42□□□□□ -0.58
CDRT1-204ENST00000395906 REXO1L1PQ8IX06 675 aa11.42□□□□□ -0.58
CDRT1-204ENST00000395906 ZSCAN16Q9H4T2 348 aaPredicted RBP11.42□□□□□ -0.58
CDRT1-204ENST00000395906 TULP4Q9NRJ4 1543 aa11.42□□□□□ -0.58
CDRT1-204ENST00000395906 MPHOSPH10O00566 681 aaKnown RBP11.42□□□□□ -0.58
CDRT1-204ENST00000395906 OAS2P29728 719 aaKnown RBP11.42□□□□□ -0.58
CDRT1-204ENST00000395906 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.42□□□□□ -0.58
CDRT1-204ENST00000395906 PLEKHG1Q9ULL1 1385 aa11.41□□□□□ -0.58
CDRT1-204ENST00000395906 TPM1P09493 284 aa11.41□□□□□ -0.58
CDRT1-204ENST00000395906 LRMPQ12912 555 aa11.41□□□□□ -0.58
CDRT1-204ENST00000395906 PTPN14Q15678 1187 aa11.41□□□□□ -0.58
CDRT1-204ENST00000395906 ZRSR1Q15695 479 aaKnown RBP11.41□□□□□ -0.58
CDRT1-204ENST00000395906 ZSCAN25Q6NSZ9 544 aa11.41□□□□□ -0.58
CDRT1-204ENST00000395906 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
CDRT1-204ENST00000395906 CEP170BQ9Y4F5 1589 aaPredicted RBP11.41□□□□□ -0.58
CDRT1-204ENST00000395906 ABCC11Q96J66 1382 aa11.41□□□□□ -0.58
CDRT1-204ENST00000395906 GADD45BO75293 160 aaPredicted RBP11.41□□□□□ -0.58
CDRT1-204ENST00000395906 HMGB1P09429 215 aaKnown RBP11.41□□□□□ -0.58
CDRT1-204ENST00000395906 FOXD4L5Q5VV16 416 aaPredicted RBP11.41□□□□□ -0.58
CDRT1-204ENST00000395906 CHD1LQ86WJ1 897 aa11.41□□□□□ -0.58
CDRT1-204ENST00000395906 FOXD4L4Q8WXT5 416 aaPredicted RBP11.41□□□□□ -0.58
CDRT1-204ENST00000395906 DNAAF4Q8WXU2 420 aa11.41□□□□□ -0.58
CDRT1-204ENST00000395906 MRVI1Q9Y6F6 885 aa11.41□□□□□ -0.58
CDRT1-204ENST00000395906 RPS6KA5O75582 802 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 SMC2O95347 1197 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 LMAN1P49257 510 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 NYAP1Q6ZVC0 841 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 FILIP1Q7Z7B0 1213 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 EFCAB13Q8IY85 973 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 FUCA2Q9BTY2 467 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 ELP1O95163 1332 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 DZIP1LQ8IYY4 767 aaKnown RBP11.4□□□□□ -0.58
CDRT1-204ENST00000395906 FAM210AQ96ND0 272 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 USP26Q9BXU7 913 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 LNPKQ9C0E8 428 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 NBPF3Q9H094 633 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 GGNBP2Q9H3C7 697 aa11.4□□□□□ -0.58
CDRT1-204ENST00000395906 SBNO2Q9Y2G9 1366 aa11.4□□□□□ -0.59
CDRT1-204ENST00000395906 WASLO00401 505 aaPredicted RBP11.39□□□□□ -0.59
CDRT1-204ENST00000395906 C21orf2O43822 256 aa11.39□□□□□ -0.59
CDRT1-204ENST00000395906 CDC45O75419 566 aa11.39□□□□□ -0.59
CDRT1-204ENST00000395906 ERCC6LQ2NKX8 1250 aa11.39□□□□□ -0.59
CDRT1-204ENST00000395906 USP48Q86UV5 1035 aa11.39□□□□□ -0.59
CDRT1-204ENST00000395906 NSD3Q9BZ95 1437 aa11.39□□□□□ -0.59
CDRT1-204ENST00000395906 KDM5AP29375 1690 aaKnown RBP11.39□□□□□ -0.59
CDRT1-204ENST00000395906 SETD1AO15047 1707 aaKnown RBP11.39□□□□□ -0.59
CDRT1-204ENST00000395906 NPHP1O15259 732 aa11.39□□□□□ -0.59
CDRT1-204ENST00000395906 ZKSCAN2Q63HK3 967 aa11.39□□□□□ -0.59
CDRT1-204ENST00000395906 TBX22Q9Y458 520 aa11.39□□□□□ -0.59
CDRT1-204ENST00000395906 USP8P40818 1118 aa11.38□□□□□ -0.59
CDRT1-204ENST00000395906 IRX1P78414 480 aaPredicted RBP11.38□□□□□ -0.59
CDRT1-204ENST00000395906 SMC1AQ14683 1233 aaKnown RBP11.38□□□□□ -0.59
CDRT1-204ENST00000395906 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.38□□□□□ -0.59
CDRT1-204ENST00000395906 TMEM87AQ8NBN3 555 aa11.38□□□□□ -0.59
CDRT1-204ENST00000395906 ZCCHC17Q9NP64 241 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms