RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 KIF4BQ2VIQ3 1234 aa20.11■□□□□ 0.81
UBFD1-201ENST00000395878 CATIPQ7Z7H3 387 aa20.11■□□□□ 0.81
UBFD1-201ENST00000395878 TEX13AQ9BXU3 409 aaPredicted RBP20.11■□□□□ 0.81
UBFD1-201ENST00000395878 LAMC3Q9Y6N6 1575 aa20.11■□□□□ 0.81
UBFD1-201ENST00000395878 EZRP15311 586 aaKnown RBP20.1■□□□□ 0.81
UBFD1-201ENST00000395878 STX1AQ16623 288 aa20.1■□□□□ 0.81
UBFD1-201ENST00000395878 PPP1R42Q7Z4L9 355 aa20.1■□□□□ 0.81
UBFD1-201ENST00000395878 URI1O94763 535 aaPredicted RBP20.1■□□□□ 0.81
UBFD1-201ENST00000395878 USP8P40818 1118 aa20.1■□□□□ 0.81
UBFD1-201ENST00000395878 CCT2P78371 535 aaKnown RBP20.1■□□□□ 0.81
UBFD1-201ENST00000395878 ANKIB1Q9P2G1 1089 aa20.1■□□□□ 0.81
UBFD1-201ENST00000395878 FOXO3O43524 673 aa20.1■□□□□ 0.81
UBFD1-201ENST00000395878 GBP2P32456 591 aaPredicted RBP20.1■□□□□ 0.81
UBFD1-201ENST00000395878 BAG4O95429 457 aaKnown RBP20.1■□□□□ 0.81
UBFD1-201ENST00000395878 IGHDP01880 384 aa20.1■□□□□ 0.81
UBFD1-201ENST00000395878 SLF2Q8IX21 1173 aa20.1■□□□□ 0.81
UBFD1-201ENST00000395878 CAVIN2O95810 425 aa20.09■□□□□ 0.81
UBFD1-201ENST00000395878 FBXO31Q5XUX0 539 aaPredicted RBP20.09■□□□□ 0.81
UBFD1-201ENST00000395878 MCM5P33992 734 aa20.09■□□□□ 0.81
UBFD1-201ENST00000395878 NLRP5P59047 1200 aa20.09■□□□□ 0.81
UBFD1-201ENST00000395878 DCAF8L1A6NGE4 600 aa20.09■□□□□ 0.81
UBFD1-201ENST00000395878 GOLIM4O00461 696 aa20.09■□□□□ 0.81
UBFD1-201ENST00000395878 IFNL2Q8IZJ0 200 aa20.09■□□□□ 0.81
UBFD1-201ENST00000395878 CCDC82Q8N4S0 544 aa20.09■□□□□ 0.81
UBFD1-201ENST00000395878 CWC25Q9NXE8 425 aaPredicted RBP20.09■□□□□ 0.81
UBFD1-201ENST00000395878 USP16Q9Y5T5 823 aa20.08■□□□□ 0.81
UBFD1-201ENST00000395878 YEATS4O95619 227 aa20.08■□□□□ 0.81
UBFD1-201ENST00000395878 IARSP41252 1262 aaKnown RBP20.08■□□□□ 0.81
UBFD1-201ENST00000395878 NEK1Q96PY6 1258 aa20.08■□□□□ 0.81
UBFD1-201ENST00000395878 NUCB1Q02818 461 aa20.08■□□□□ 0.8
UBFD1-201ENST00000395878 USO1O60763 962 aaKnown RBP20.08■□□□□ 0.8
UBFD1-201ENST00000395878 UBE2HP62256 183 aa20.08■□□□□ 0.8
UBFD1-201ENST00000395878 UVSSAQ2YD98 709 aa20.08■□□□□ 0.8
UBFD1-201ENST00000395878 KLHL40Q2TBA0 621 aa20.07■□□□□ 0.8
UBFD1-201ENST00000395878 PI4KAP2A4QPH2 592 aa20.07■□□□□ 0.8
UBFD1-201ENST00000395878 SSR1P43307 286 aaKnown RBP20.07■□□□□ 0.8
UBFD1-201ENST00000395878 PI4KAP1Q8N8J0 262 aa20.07■□□□□ 0.8
UBFD1-201ENST00000395878 PYM1Q9BRP8 204 aaKnown RBP20.07■□□□□ 0.8
UBFD1-201ENST00000395878 TNNT1P13805 278 aa20.07■□□□□ 0.8
UBFD1-201ENST00000395878 ZBTB3Q9H5J0 574 aa20.07■□□□□ 0.8
UBFD1-201ENST00000395878 NUP88Q99567 741 aaPredicted RBP20.06■□□□□ 0.8
UBFD1-201ENST00000395878 TFIP11Q9UBB9 837 aaKnown RBP20.06■□□□□ 0.8
UBFD1-201ENST00000395878 CCDC12Q8WUD4 166 aaPredicted RBP20.06■□□□□ 0.8
UBFD1-201ENST00000395878 CCDC96Q2M329 555 aa20.06■□□□□ 0.8
UBFD1-201ENST00000395878 GDPD2Q9HCC8 539 aa20.06■□□□□ 0.8
UBFD1-201ENST00000395878 LDHAL6AQ6ZMR3 332 aa20.05■□□□□ 0.8
UBFD1-201ENST00000395878 CUL5Q93034 780 aa20.05■□□□□ 0.8
UBFD1-201ENST00000395878 CGNQ9P2M7 1197 aaKnown RBP20.05■□□□□ 0.8
UBFD1-201ENST00000395878 ORC3Q9UBD5 711 aaPredicted RBP20.05■□□□□ 0.8
UBFD1-201ENST00000395878 FAM83GA6ND36 823 aa20.05■□□□□ 0.8
UBFD1-201ENST00000395878 TMEM67Q5HYA8 995 aa20.05■□□□□ 0.8
UBFD1-201ENST00000395878 NCOA7Q8NI08 942 aa20.05■□□□□ 0.8
UBFD1-201ENST00000395878 LARP6Q9BRS8 491 aaKnown RBP20.05■□□□□ 0.8
UBFD1-201ENST00000395878 TRIM21P19474 475 aaKnown RBP20.05■□□□□ 0.8
UBFD1-201ENST00000395878 KIF5BP33176 963 aa20.05■□□□□ 0.8
UBFD1-201ENST00000395878 PIP4K2BP78356 416 aa20.05■□□□□ 0.8
UBFD1-201ENST00000395878 KANK3Q6NY19 840 aa20.05■□□□□ 0.8
UBFD1-201ENST00000395878 ZSCAN16Q9H4T2 348 aaPredicted RBP20.05■□□□□ 0.8
UBFD1-201ENST00000395878 RHPN1Q8TCX5 695 aa20.04■□□□□ 0.8
UBFD1-201ENST00000395878 PAFAH1B1P43034 410 aa20.04■□□□□ 0.8
UBFD1-201ENST00000395878 UBE3BQ7Z3V4 1068 aa20.04■□□□□ 0.8
UBFD1-201ENST00000395878 PODXL2Q9NZ53 605 aa20.04■□□□□ 0.8
UBFD1-201ENST00000395878 ADCY5O95622 1261 aa20.04■□□□□ 0.8
UBFD1-201ENST00000395878 CDC5LQ99459 802 aaKnown RBP20.04■□□□□ 0.8
UBFD1-201ENST00000395878 GOLGA6L9A6NEM1 432 aa20.04■□□□□ 0.8
UBFD1-201ENST00000395878 ZNF165P49910 485 aa20.04■□□□□ 0.8
UBFD1-201ENST00000395878 AMPD3Q01432 767 aa20.04■□□□□ 0.8
UBFD1-201ENST00000395878 ACEP12821 1306 aa20.03■□□□□ 0.8
UBFD1-201ENST00000395878 TAF3Q5VWG9 929 aa20.03■□□□□ 0.8
UBFD1-201ENST00000395878 LUZP1Q86V48 1076 aa20.03■□□□□ 0.8
UBFD1-201ENST00000395878 UBA5Q9GZZ9 404 aa20.03■□□□□ 0.8
UBFD1-201ENST00000395878 DENND4BO75064 1496 aaPredicted RBP20.03■□□□□ 0.8
UBFD1-201ENST00000395878 LDHCP07864 332 aa20.03■□□□□ 0.8
UBFD1-201ENST00000395878 SNRPA1P09661 255 aaKnown RBP20.03■□□□□ 0.8
UBFD1-201ENST00000395878 GPTP24298 496 aa20.03■□□□□ 0.8
UBFD1-201ENST00000395878 TCP11L1Q9NUJ3 509 aa20.03■□□□□ 0.8
UBFD1-201ENST00000395878 SHTN1A0MZ66 631 aa20.03■□□□□ 0.8
UBFD1-201ENST00000395878 METAP2P50579 478 aaKnown RBP eCLIP20.03■□□□□ 0.8
UBFD1-201ENST00000395878 TMC6Q7Z403 805 aa20.03■□□□□ 0.8
UBFD1-201ENST00000395878 PPP4R3AQ6IN85 833 aa20.02■□□□□ 0.8
UBFD1-201ENST00000395878 KRT28Q7Z3Y7 464 aa20.02■□□□□ 0.8
UBFD1-201ENST00000395878 PLCD4Q9BRC7 762 aa20.02■□□□□ 0.8
UBFD1-201ENST00000395878 DNAI2Q9GZS0 605 aa20.02■□□□□ 0.8
UBFD1-201ENST00000395878 EHMT1Q9H9B1 1298 aa20.02■□□□□ 0.8
UBFD1-201ENST00000395878 FANCAO15360 1455 aa20.02■□□□□ 0.8
UBFD1-201ENST00000395878 ERICH4A6NGS2 130 aa20.02■□□□□ 0.8
UBFD1-201ENST00000395878 POTEB2H3BUK9 544 aa20.02■□□□□ 0.8
UBFD1-201ENST00000395878 EXOC5O00471 708 aa20.02■□□□□ 0.8
UBFD1-201ENST00000395878 MFSD6Q6ZSS7 791 aa20.02■□□□□ 0.8
UBFD1-201ENST00000395878 RPGRQ92834 1020 aaKnown RBP20.02■□□□□ 0.8
UBFD1-201ENST00000395878 CALML4Q96GE6 196 aa20.02■□□□□ 0.8
UBFD1-201ENST00000395878 CPLX3Q8WVH0 158 aa20.02■□□□□ 0.79
UBFD1-201ENST00000395878 TMX3Q96JJ7 454 aa20.02■□□□□ 0.79
UBFD1-201ENST00000395878 UQCRFS1P1P0C7P4 283 aa20.01■□□□□ 0.79
UBFD1-201ENST00000395878 CCDC102BQ68D86 513 aa20.01■□□□□ 0.79
UBFD1-201ENST00000395878 ATP5J2-PTCD1G3V325 749 aa20.01■□□□□ 0.79
UBFD1-201ENST00000395878 MTIF2P46199 727 aaKnown RBP20.01■□□□□ 0.79
UBFD1-201ENST00000395878 PDE4BQ07343 736 aa20.01■□□□□ 0.79
UBFD1-201ENST00000395878 TDRD12Q587J7 1177 aaKnown RBP20.01■□□□□ 0.79
UBFD1-201ENST00000395878 C16orf45Q96MC5 204 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms